KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4331337
Entry
4331337           CDS       T01015                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 24 homolog 1
  KO
K12193  charged multivesicular body protein 3
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4331337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4331337
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4331337
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    4331337
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   4331337
SSDB
Motif
Pfam: Snf7 PSD4 HTH_26 Mnd1 PYC_OADA
Other DBs
NCBI-GeneID: 4331337
NCBI-ProteinID: XP_015628396
UniProt: Q10SX2 A0A8J8XXR8
LinkDB
Position
3:497739..499562
AA seq 231 aa
MEAVKSLLKPKPTPQQQLREWQRRLRNEGRNIDRQIRDVQREEKKVEKSIREAAKRNDIG
SAKALAKEVVRSRKAVNRLYENKAQLNSISMHLGEIVATARTVGHLSKSTEVMKLVNNLM
KAPEVAATMQEFSKEMTKAGVMEEMVNDAVDSALDNEDIEEEIEEEVDKVLSAIAGETAS
ELPDAVRKEKEKMKQPSTSEPAERTAIAEAVDDDDDDELEQIRERLAKVRS
NT seq 696 nt   +upstreamnt  +downstreamnt
atggaggcggtgaagagcctcctcaagcccaagccgacgccgcagcagcagcttcgcgag
tggcagcgccgcctccgcaacgagggccgcaacatcgatcgccagatccgagatgtgcag
agggaggagaagaaggtggagaagtccatcagggaggccgccaagcgcaacgacatcgga
tcggccaaggcgctggccaaggaggtggtgaggtccaggaaggcggtcaaccgcctctac
gagaacaaggcccagctcaactccatctccatgcaccttggcgagatcgtagctactgcc
aggactgttggccatttatccaagagtactgaggtgatgaaacttgtcaataaccttatg
aaagcaccagaggtggctgccaccatgcaggaattcagcaaagagatgaccaaggctggt
gtaatggaagaaatggtgaacgatgctgtggattcagcgctggacaatgaggacattgag
gaggagattgaagaggaggttgacaaggtcctctctgcaattgctggggagactgcctct
gagcttccagacgctgtcaggaaggaaaaggagaagatgaagcaaccttcaacaagtgaa
cctgcagagagaactgctattgcggaagccgtcgatgacgatgacgatgacgagcttgaa
cagataagggaaaggctcgccaaagtgaggtcataa

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4343227
Entry
4343227           CDS       T01015                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 24 homolog 1 isoform X1
  KO
K12193  charged multivesicular body protein 3
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4343227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4343227
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4343227
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    4343227
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   4343227
SSDB
Motif
Pfam: Snf7 DUF3375 PSD4 DUF826 NAD_binding_11 HTH_26 HTH_11 DUF6074
Other DBs
NCBI-GeneID: 4343227
NCBI-ProteinID: XP_015647462
UniProt: Q8GVS9
LinkDB
Position
7:complement(17421298..17426389)
AA seq 229 aa
MEKVKGLLKPRPTPQQQLREWQRKLRNECRVLDRQIRDVQREEKNVEKSIREAAKRNDIG
SAKALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSAEVMKIVNNLM
KAPELAATMQEFSKEMTKAGVMEEMVNDAVDSALDSEDMEEEIEEEVDKVLASVAGETAS
QLPDAVRKQRINQASTSRVPEERQAVAEGADDDEEDLEEIRARLAKVRS
NT seq 690 nt   +upstreamnt  +downstreamnt
atggagaaggtgaagggtctgctgaagccgcggccgacgccgcagcagcagctgcgggag
tggcagcgcaagctccgcaacgagtgccgcgtcctcgaccgccagatccgagatgtgcag
agggaggagaagaacgtggagaagtctatcagggaggctgcaaagcgcaatgacattgga
tccgcaaaggctcttgctaaggaactagtgaggtcaagacgtgctgttaatcgtctctat
gaaaacaaggctcaactaaattcagtatcaatgcatcttggagaaattgttgcaacggca
agaactgtcggtcatctgtcaaaaagtgctgaagttatgaaaatcgttaacaatctaatg
aaagctccagaattggctgccaccatgcaagaatttagtaaagaaatgacaaaggctggt
gtgatggaagagatggtcaacgatgcagttgattcagctttggactctgaggacatggag
gaggaaattgaagaggaggttgacaaggttcttgcttcagtagctggggagactgcctca
cagctacccgatgctgtgaggaaacagaggataaaccaagcttcaacaagcagggtccca
gaagagcgacaagctgttgctgagggcgctgatgatgatgaggaagatctggaagagatc
agagcacggcttgctaaagtgaggtcataa

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