KEGG   Oryza sativa japonica (Japanese rice): 4332557
Entry
4332557           CDS       T01015                                 
Symbol
OsJ_10509
Name
(RefSeq) U2 small nuclear ribonucleoprotein B'' isoform 1
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4332557 (OsJ_10509)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4332557 (OsJ_10509)
Spliceosome [BR:osa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    4332557 (OsJ_10509)
 Complex B
    4332557 (OsJ_10509)
 Complex C
   U2 SnRNP specific factors
    4332557 (OsJ_10509)
SSDB
Motif
Pfam: RRM_1 RRM_5 xRRM DUF4523 TraV
Other DBs
NCBI-GeneID: 4332557
NCBI-ProteinID: NP_001404522
LinkDB
Position
3:complement(join(10529800..10530084,10530905..10530978,10532144..10532237,10532939..10533111,10533614..10533686))
AA seq 232 aa
MLSGDIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFS
EITAATNAFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAPKEKRKKQEEKAAEKKRR
AEEAQQSGPNAAAQSNGTGYQASRLGKTSQEPPAPPNNILFIQNLPAETTSMMLQILFQQ
YPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAKK
NT seq 699 nt   +upstreamnt  +downstreamnt
atgttgtccggcgacatacccccgaaccagacggtctacctcaggaacctcaacgagaag
gtcaagaaagaagaattaaagagatcactctatgcgttgtgctcccaatatgggaggata
ctggatgtggtggccttaaaaacacctaaactgagggggcaggcatgggtggtcttcagc
gaaattaccgccgccacaaatgctttccgtggactgcaggaattcgatttttatggcaaa
agaatgcgagtacaatatgcgaaaacaagatctgactgtcttgcaaccgaagatggttct
actgctccaaaagagaaaagaaagaagcaagaggagaaagcagcggagaaaaaacgacga
gctgaagaggcgcaacaatctggtcctaatgctgctgcccaaagcaatgggactggttat
caagcctcacgcctgggcaagacttcgcaagagccacctgcacctccaaacaatatcctt
ttcatccagaacttaccagctgagactacaagcatgatgctccagatcctgttccagcag
taccctggtttcagggaagtccggatgatcgaagccaagccaggcattgcttttgtggaa
tacgaggacgacagccagtctatggttgcaatgcaagctctgcagggtttcaagatcacc
ccatacaacccaatggctatatcctacgcaaagaagtga

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