Oryza sativa japonica (Japanese rice) (RefSeq): 4332690
Help
Entry
4332690 CDS
T01015
Name
(RefSeq) magnesium-chelatase subunit ChlH, chloroplastic
KO
K03403
magnesium chelatase subunit H [EC:
6.6.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00860
Porphyrin metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
4332690
Enzymes [BR:
osa01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
4332690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
DUF3479
Motif
Other DBs
NCBI-GeneID:
4332690
NCBI-ProteinID:
XP_015631165
UniProt:
Q10M50
LinkDB
All DBs
Position
3:11712161..11718963
Genome browser
AA seq
1387 aa
AA seq
DB search
MSSLVSTPFTTATGVQKKLGAPVPLHSFLLSRRQPAAGAGRGRAAAAAIRCAVAGNGLFT
QTKPEVRRVVPPEGDASRRGVPRVKVVYVVLEAQYQSSVTAAVRELNADPRRAAGFEVVG
YLVEELRDEETYKTFCADLADANVFIGSLIFVEELALKVKDAVEKERDRMDAVLVFPSMP
EVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKNSGGFADSMLKLVRTLPKVLKYLPSDKAQ
DARLYILSLQFWLGGSPDNLQNFLKMIAVSYVPALKGADIKYDDPVLFLDAGIWHPLAPT
MYDDVKEYLNWYGTRRDTNDKLKDPNAPVIGLVLQRSHIVTGDDGHYVAVIMELEAKGAK
VIPIFAGGLDFSGPTQRYLVDPITGKPFVNAVVSLTGFALVGGPARQDHPKAIAALQKLD
VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGKSHAL
HKRVEQLCTRAIRWAELKRKTKEEKKLAITVFSFPPDKGNVGTAAYLNVFNSIYSVLQDL
KKDGYNVEGLPDTAEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTSYASLLEENWG
KPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYTFVE
KIFQADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNIYYYAANNPSEATVAKRR
SYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKD
VPLPEEGVELPPNERDLIVGKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATLVNIASL
DRPEDEIYSLPNILAQTVGRNIEDVYRGSDKGILADVELLRQITEASRGAITTFVERTTN
NKGQVVDVTNKLSTMLGFGLSEPWVQHLSKTKFIRADREKLRTLFTFLGECLKLIVADNE
LGSLKLALEGSYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAALKSAKIIVDRLLE
RQKVDNGGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVRPVADTFGRVNRVEPVSLEE
LGRPRIDVVINCSGVFRDLFINQMNLLDRAVKMVAELDEPEEMNYVRKHAQEQARELGVS
LREAATRVFSNASGSYSSNVNLAVENASWTDEKQLQDMYLSRKSFAFDCDAPGAGMREQR
KTFELALATADATFQNLDSSEISLTDVSHYFDSDPTKLVQGLRKDGRAPSSYIADTTTAN
AQVRTLSETVRLDARTKLLNPKWYEGMMKSGYEGVREIEKRLTNTVGWSATSGQVDNWVY
EEANATFIEDEAMRKRLMDTNPNSFRKLVQTFLEASGRGYWETSEENLEKLRELYSEVED
KIEGIDR
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttagtgtcgacgccgttcacgacggcaaccggggtgcagaagaagctgggg
gcgcccgtgccgctccactcgttcttgctgagccggcggcagccagcggcgggcgcgggg
aggggacgcgcggcggcggcggcgatacggtgcgcggtggccgggaacgggctgttcacg
cagaccaagccggaggtgcggcgcgtggtgccgcccgagggcgacgcgtcgcggcgcggg
gtgccgcgggtgaaggtggtgtacgtcgtgctggaggcgcagtaccagtcgtcggtgacg
gcggcggtgcgggagctcaacgccgacccgcgccgcgcggcggggttcgaggtggtgggc
tacctcgtggaggagctccgggacgaggagacgtacaagaccttctgcgccgacctcgcc
gacgccaatgtgttcatcggctcgctcatcttcgtggaggagctcgcgctcaaggtgaag
gatgccgtcgagaaggagcgcgaccggatggacgccgtgctcgtcttcccgtcgatgccg
gaggtcatgcgcctcaacaagctcggctccttcagcatgtcccagctcggccagtccaag
agcccattcttccagctcttcaagcgcaagaagaactccggtggcttcgccgatagcatg
ctcaagctggtgcgcacgctgcccaaggtgctcaagtacttgccctccgacaaggcgcag
gacgcccggctgtacatcctcagcctccagttctggctcggaggctcgccggacaacctc
cagaatttcctcaagatgatcgccgtctcctacgtgccggcgctcaagggcgccgacatc
aagtacgacgaccccgtcctcttcctcgacgctggtatctggcacccgctggcgcccacc
atgtacgacgacgtcaaggagtacctcaactggtacggcacccgccgcgacaccaacgac
aagctcaaggaccccaacgcgccggtgatcggcctcgttttgcagaggagccacattgtc
accggagacgacggtcactacgtcgccgtgatcatggagctggaggccaagggtgccaag
gtcataccgatcttcgccggcgggctggacttctcgggacccacgcagcggtacctcgtc
gacccgatcaccggaaagccgttcgtgaacgcggtggtgtcgctcaccgggttcgcgctc
gtcggagggccagcgaggcaggaccatcccaaggcgatcgccgcgctgcagaagctcgac
gtgccgtacatcgtggcactgccgctcgtgttccagacgacagaggagtggctgaacagc
acattgggcctgcacccgattcaggtggcgctgcaggttgcgctcccggagcttgacggt
ggcatggagcccattgtgttcgccggccgtgaccccagaacagggaagtcacatgcgttg
cacaagagggtggagcagctctgcactagagcaatcagatgggcagagctgaagaggaaa
actaaggaggagaagaaactggcaatcactgttttcagcttcccaccagacaaaggcaat
gttggcacagcagcatacctgaatgttttcaactccatctactccgtcctccaagatctg
aagaaggatggctacaatgttgagggtcttccagacacagctgaggccctcatcgaggag
gttattcatgataaggaggcccaattcaatagccccaacctcaatgttgcttaccgcatg
aacgtgcgggagtaccagtcactcacttcctatgcctccttgctggaggagaactggggc
aagccacctgggaaccttaattctgatggtgaaaacctccttgtctatgggaaacagtac
ggcaatgtattcattggagttcagcccacttttggctatgaaggagatccgatgcggctt
ctgttctcaaaatctgctagccctcaccatggctttgcagcatactacacctttgttgag
aagatcttccaggctgatgctgttcttcactttggtacccatgggtctcttgagttcatg
ccagggaagcaggttgggatgagtgatgcatgctatcctgacagtctcattggcaacatc
cccaatatctactactatgcagcaaacaatccatcagaagcaactgttgccaagcgcaga
agctatgcaaacaccataagctacctgacaccaccagctgaaaatgctggtctctacaag
gggctcaagcagctttcagagctcatctcttcttaccaatctctcaaggacacaggacgt
ggtccgcagattgtgagctcaatcattagcactgcaaaacagtgtaatcttgacaaggat
gttcccttgcctgaggaaggtgtggagcttccaccaaatgagcgtgaccttattgttgga
aaggtgtatgccaagatcatggaaatagaatcacgcctcctaccatgcggtctgcatgtg
ataggtgagccaccaagtgccatcgaggctgtggccaccttggtgaacatagcttccctt
gatcgcccagaggatgaaatatactcactgcctaacatacttgctcagacagtgggcagg
aacattgaagatgtgtacagaggaagtgacaagggaatactggcggatgttgaactgttg
aggcagataacagaagcttcacgtggtgccatcactacctttgttgagaggactacaaac
aacaaagggcaagttgttgatgttacaaacaaacttagtaccatgcttggttttggttta
tcagaaccatgggtacaacacttgtccaagaccaagttcatcagagcagacagagagaaa
ttgagaaccttgtttactttcttgggagaatgcttgaagctaattgtggcagataatgag
ctgggaagcttgaaacttgccctcgagggaagctatgttgaacctggccctggtggtgat
ccaatccgtaacccgaaggttctcccgacagggaagaacatccatgctcttgaccctcag
gcaatcccaactacagctgccttgaagagcgccaaaattattgtagaccgtctgctggag
cggcaaaaggttgacaatggtggcaagtatcctgagacaattgcacttgtcttgtggggc
accgataacatcaagacctatggtgagtcattggcccaggtgctgtggatgattggtgtg
cgcccggttgctgacacctttggccgtgtcaaccgtgtggaacctgtcagccttgaggag
cttggacgtcccaggattgacgttgttatcaactgctcgggtgtcttcagagatcttttc
atcaaccagatgaatctactggaccgggcagtgaagatggttgccgaactggatgagcca
gaagagatgaactacgtgcgtaagcatgcacaagagcaggcacgggaacttggcgtttca
ttaagagaggcggcaacaagggtgttctcaaatgcatcaggctcttactcatcgaatgtg
aacttggcagtggagaatgcatcatggactgatgagaagcagctccaggacatgtacctg
agtcgcaagtcttttgcatttgattgtgatgctccaggggcaggcatgcgagagcaacgc
aagacatttgagcttgctctagcaacagcagatgccacattccagaacctagactcatca
gagatttcactaacagatgtgagccactactttgactcagacccgacaaagctggtgcaa
ggactgcgcaaggatgggcgggcaccttcctcatacatagcagatacaaccacagcaaat
gcacaggtgaggacattgtcagagacagtgcgccttgatgcaaggacaaagctactgaac
cctaagtggtacgaggggatgatgaaaagtggctacgagggagttagagagattgagaag
cggctgacaaatactgttggatggagtgcaacatctggacaggttgacaactgggtttat
gaggaggcaaatgccacatttattgaagatgaggctatgaggaagaggctcatggacacc
aaccccaattcattcaggaagctagttcagaccttcctagaagccagtggcagaggctac
tgggagacatcagaggaaaacttggaaaagctcagggagctctactctgaggttgaagac
aagattgaaggaattgaccggtaa
Oryza sativa japonica (Japanese rice) (RefSeq): 4333259
Help
Entry
4333259 CDS
T01015
Name
(RefSeq) magnesium-chelatase subunit ChlI, chloroplastic
KO
K03405
magnesium chelatase subunit I [EC:
6.6.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00860
Porphyrin metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
4333259
Enzymes [BR:
osa01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
4333259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_2
Mg_chelatase
AAA_5
MCM
AAA_16
AAA_22
Sigma54_activat
bpMoxR
AAA
DUF815
AAA_7
AAA_29
Motif
Other DBs
NCBI-GeneID:
4333259
NCBI-ProteinID:
XP_015627981
UniProt:
Q53RM0
LinkDB
All DBs
Position
3:complement(20248212..20250141)
Genome browser
AA seq
415 aa
AA seq
DB search
MASAFSPATAAPAASPALFSASTSRPLSLTAAAAAVSARIPSRRGFRRGRFTVCNVAAPS
ATQQEAKAAGAKESQRPVYPFAAIVGQDEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTV
RSLVDLLPDIRVVVGDPFNSDPDDPEVMGPEVRERVLEGEKLPVVTAKITMVDLPLGATE
DRVCGTIDIEKALTDGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTV
EREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFD
RDPKAFRESYLEEQDKLQQQISSARSNLGAVQIDHDLRVKISKVCAELNVDGLRGDIVTN
RAAKALAALKGRDTVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgccttctcccccgccaccgccgcgcccgccgcgtcgccggccctcttctcc
gcctccacctcccggcctctctccctcaccgccgccgccgctgccgtctcagcccgtatc
ccgtcacggagagggttccgccgcggccgcttcaccgtctgcaatgtagccgccccctcc
gccacccagcaggaggctaaggcggcgggcgcgaaggagagccaacggccggtgtatccg
ttcgcggcgatcgtggggcaggacgagatgaagctgtgcctgctgctcaacgtcatcgac
cctaagatcggcggtgtcatgatcatgggagaccgtggcaccggcaaatccaccaccgtc
cgctcgctcgtcgacctgctcccggatatccgcgtcgttgttggcgaccctttcaattcc
gaccctgacgatcccgaggtcatgggccctgaggtccgggaacgcgtgctggagggtgag
aagcttcctgttgtcacggccaagatcaccatggtagatcttccccttggtgccactgag
gatagagtctgtggcaccattgatattgagaaggcgctcaccgatggtgtcaaggcgttc
gagcctggtttgcttgccaaggccaacagggggattctttatgtggatgaggtcaatttg
ttggatgaccatctagtagatgtgcttctggattctgctgcgtcaggatggaacaccgtg
gagagagagggtatctccatctcccaccctgctcggttcatcctcattgggtctggtaac
cccgaggaaggggagctccggccacagctgcttgaccggtttggcatgcacgcgcaggtt
ggtactgtcagggatgctgaactcagggtgaaaattgttgaagagagagctcggttcgac
agggatccaaaggcgttccgtgagtcctacttggaggaacaagacaagctccagcagcag
atttcatctgctcggagtaaccttggtgctgtgcagattgaccatgatcttcgtgttaag
atttctaaagtgtgtgcagagttgaatgttgatggattaagaggggacattgtgactaac
agggctgccaaggcgttggcagcactcaaaggcagggacactgtcactgtagaggacatt
gccactgttatccccaactgcttgaggcatcggcttcggaaggacccacttgaatcaatt
gactcaggattgctcgtggttgagaagttttatgaagtcttcacctaa
Oryza sativa japonica (Japanese rice) (RefSeq): 4334537
Help
Entry
4334537 CDS
T01015
Name
(RefSeq) magnesium-chelatase subunit ChlD, chloroplastic
KO
K03404
magnesium chelatase subunit D [EC:
6.6.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00860
Porphyrin metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
4334537
Enzymes [BR:
osa01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
4334537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_2
VWA_2
Mg_chelatase
VWA
AAA_5
MCM
Sigma54_activat
RXT2_N
VWA_3
CCDC53
PAXIP1_C
MID_MedPIWI
CDC45
Mg_chelatase_C
AAA_2
Motif
Other DBs
NCBI-GeneID:
4334537
NCBI-ProteinID:
XP_015631084
UniProt:
Q6ATS0
LinkDB
All DBs
Position
3:33955203..33961949
Genome browser
AA seq
754 aa
AA seq
DB search
MAMATTALSASLPRLLPPRRRRFPTPSSSSPSAASTSTSRVVRLRAAAASAPSEVLDSTN
GAIPSGKGGGGQQYGREYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRGTAKTVMA
RGLHAMLPPIEVVVGSIANADPNYPEEWEEGLANQVQYDADGNLKTEIIKTPFVQIPLGI
TEDRLIGSVDVEASVKSGTTVFQPGLLAEAHRGVLYVDEINLLDEGVSNLLLNVLTEGVN
IVEREGISFRHPCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDDRVAAVDIATQ
FQESSKEVFKMVEEETEVAKTQIILAREYLKDVAISTEQLKYLVMEAIRGGCQGHRAELY
AARVAKCLAAMEGREKVYVDDLKKAVELVILPRSILSDNPQEQQDQQPPPPPPPPPPQDQ
DSQEDQDEDEEEDQEDDDEENEQQDQQIPEEFIFDAEGGIVDEKLLFFAQQAQRRRGKAG
RAKNLIFSSDRGRYIGSMLPKGPIRRLAVDATLRAAAPYQKLRREKDRDKTRKVFVEKTD
MRAKRMARKAGALVIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQVSIIPFRGDFA
EVLLPPSRSIAMARNRLEKLPCGGGSPLAHGLSTAVRVGLNAEKSGDVGRIMIVAITDGR
ANVSLKKSTDPEATSDAPRPSSQELKDEILEVAGKIYKAGISLLVIDTENKFVSTGFAKE
IARVAQGKYYYLPNASDAVISAATKTALSDLKSS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggccaccaccgcgctctccgcctccctcccgcgcctactcccgcctcgccgc
cgccgcttcccgacgccctcctcctcctccccctccgccgcatccacctccacctcccgc
gtcgtccgcctgcgggccgccgcggcctcggcgccatccgaggtcctcgactccaccaac
ggggccatcccctcggggaagggcggcggcgggcagcagtacgggagggagtatttcccc
ttggccgctgtcgtcgggcaggatgcaattaaaactgctctgctgcttggggcaattgac
cgtgaaattggaggcatcgccatctcagggaagcgtgggacagcaaagacagtgatggct
cgtggcttgcacgctatgcttccacctattgaagtggttgtaggctcgattgcaaatgct
gaccctaactacccagaagaatgggaggagggtttggctaaccaagttcaatatgatgct
gatggtaacttgaagaccgagattatcaaaacaccttttgtgcagatcccgcttggtatc
actgaggataggttaatcggatcagtcgatgttgaagcatctgtgaaatcaggaactact
gtgtttcaacctggccttcttgctgaagctcacagaggcgttctttatgttgatgagata
aatctattggatgagggcgtaagcaatctacttctgaatgtcttgactgagggagtcaat
attgtggaaagagagggcattagctttcgtcatccatgcaaaccacttctaattgctact
tacaacccagaggaaggatctgtacgtgaacacttacttgatcgtattgcaattaattta
agcgctgatctgccaatgagttttgatgatcgtgtggcagctgtggatattgcaacacaa
tttcaagagtccagcaaagaggtttttaaaatggtggaagaagaaactgaggttgcaaaa
acccagataattttggcaagagaatatctgaaagatgttgcaatcagcacagagcagctc
aaatatcttgtcatggaagctatacgcggtggctgtcaggggcaccgggctgagctgtat
gctgctcgagtggcaaaatgtcttgctgctatggaagggcgtgaaaaagtatatgtggat
gaccttaagaaagctgtagagctagttattctacctcgatcaatcctatctgataaccca
caggagcagcaagaccaacaacctcctccacccccaccgccaccccctccacaagatcaa
gattctcaagaagatcaagatgaagacgaggaagaggaccaagaggacgatgatgaagaa
aatgaacagcaggaccagcagatacctgaggagttcatttttgatgctgaaggtggtata
gtagatgagaagctccttttctttgctcagcaagctcaaagacggcgagggaaagctgga
cgagcaaagaatctcatattctcatctgataggggacgatacataggttctatgcttccc
aagggtccaataaggaggttagctgttgatgccacacttcgagcagctgcaccataccag
aaactgaggagagagaaagatcgtgacaagacaagaaaggtttttgttgaaaaaactgac
atgagagccaaaagaatggctcgaaaagcaggcgcactggtcatatttgttgtggatgct
agcggtagcatggctctgaatcgcatgcagaatgcgaaaggtgcagcattaaagttgctt
gcagaaagctacacaagcagagatcaggtttcaatcattccatttcgtggagattttgct
gaggttcttcttccaccttcaagatccatagcaatggcccgcaatcgtcttgagaagcta
ccatgtggtggcggttctcctttagctcacggccttagcacagctgtcagagtgggtttg
aatgctgaaaagagcggtgatgttggacgtatcatgattgttgcaatcaccgatggaaga
gctaatgtgtcactgaagaaatcgactgacccagaagccacttcagatgctccaagacct
tcttctcaagaattaaaggatgagatacttgaggtggctggcaaaatatacaaggctgga
atttcacttcttgttattgataccgagaacaagtttgtatccacaggatttgccaaggaa
attgcaagggtcgcccaaggtaaatactattacctgccgaatgcttcagacgctgttatt
tccgccgccaccaagactgcactctcggacctgaagagttcgtga
DBGET
integrated database retrieval system
