Oryza sativa japonica (Japanese rice): 4332793
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Entry
4332793 CDS
T01015
Name
(RefSeq) large ribosomal subunit protein eL18x
KO
K02883
large subunit ribosomal protein L18e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4332793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4332793
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4332793
Archaea
4332793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L18
Ribosomal_L27A
Motif
Other DBs
NCBI-GeneID:
4332793
NCBI-ProteinID:
XP_015631625
UniProt:
A0A8J8Y877
Q10LN7
LinkDB
All DBs
Position
3:complement(join(12771285..12771443,12772797..12772979,12773072..12773200,12773287..12773376,12773460..12773462))
Genome browser
AA seq
187 aa
AA seq
DB search
MGIDLVAGGRNKKTKRTAPKSDDVYLKLIVKLYRFLVRRTKSPFNAVILRRLFMSKTNRP
PLSLRRLVRFMEGKENQIAVIVGTVTDDKRVYEVPAMKVAALRFTETARARIVNTGGECL
TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFEKARGRR
NSKGFKV
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag
tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc
aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg
ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg
atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc
gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt
accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt
cctaagaacgccagggaagcagtgaagcactttggtcctgctcctggagtgccacacagc
aacaccaagccttacgtgcgctcaaagggaaggaagtttgagaaggcgagaggaaggagg
aacagcaaaggcttcaaggtctaa
Oryza sativa japonica (Japanese rice): 4337849
Help
Entry
4337849 CDS
T01015
Name
(RefSeq) 60S ribosomal protein L18-3
KO
K02883
large subunit ribosomal protein L18e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4337849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4337849
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4337849
Archaea
4337849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L18
Ribosomal_L27A
Motif
Other DBs
NCBI-GeneID:
4337849
NCBI-ProteinID:
NP_001407136
LinkDB
All DBs
Position
5:join(3248971..3248973,3249063..3249152,3249548..3249676,3249806..3249991,3250993..3251151)
Genome browser
AA seq
188 aa
AA seq
DB search
MGIDLVAGGRNKKTKRTAPRSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP
PLSLRRLAKFMEGKEENNIAVIVGTVTDDKRIQEIPKMKVTALRFTETARARIVNAGGEC
LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR
RNSRGFKV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgagg
tcggacgatgtctacctcaagctcctcgtcaagctgtaccgtttcctggtgaggagaacc
aagagtaacttcaatgccgtgatcctcaagaggctcttcatgagcaagaccaaccgcccg
ccgctctccctgcgccgcctcgccaagttcatggaaggcaaggaggagaacaacattgct
gtgattgttggtacagtcactgatgacaagaggatccaagagattccgaaaatgaaggtt
actgccctgaggttcacggagacggctagggcaaggattgtcaatgctggcggcgagtgc
ctcaccttcgaccagcttgctctccgtgctccgcttggggagaacacggtcctcttgagg
ggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcctggtgtgccgcac
agccacacgaagccatatgtgcgctccaagggaaggaagttcgagaaggcccgtggcagg
aggaacagccgtggattcaaggtctaa
Oryza sativa japonica (Japanese rice): 4344265
Help
Entry
4344265 CDS
T01015
Name
(RefSeq) large ribosomal subunit protein eL18x isoform X1
KO
K02883
large subunit ribosomal protein L18e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4344265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4344265
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4344265
Archaea
4344265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L18
Ribosomal_L27A
Motif
Other DBs
NCBI-GeneID:
4344265
NCBI-ProteinID:
XP_015644690
UniProt:
Q6ZDW5
Q0D3P2
LinkDB
All DBs
Position
7:join(28771304..28771306,28771386..28771475,28771574..28771726,28771810..28771992,28773372..28773530)
Genome browser
AA seq
195 aa
AA seq
DB search
MGIDLVAGGRNKKTKRTAPRSEDVYLKLIVKLYRFLVRRTKSHFNAVILKRLFMSKTNRP
PLSMRRLVRFMEGKVPDRHAISGDQIAVIVGTVTDDKRIYEVPAMKVAALRFTETARARI
INAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRK
FEKARGRRNSKGFKV
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccagg
tccgaggatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc
aagagccacttcaacgccgtgatcctgaagcggctcttcatgagcaagaccaaccgcccg
ccgctctcgatgcgccgtctcgtcaggttcatggaggggaaggtacctgatcgccatgcc
atttcgggggaccagatcgccgtgatcgtgggcaccgtcacagatgacaagaggatctat
gaggtgccggcgatgaaggtggctgctctcaggttcaccgagaccgcgagagcacggatc
atcaatgccggtggcgagtgcctcacgttcgaccagctcgctctccgcgccccgcttggc
cagaacacggtcctcctgaggggtcccaagaacgctagggaagctgttaagcactttggc
cctgctccaggagttccccacagcaacactaagccatatgttcgctcaaagggaaggaaa
tttgagaaggcaagaggaagaaggaacagcaagggcttcaaggtataa
DBGET
integrated database retrieval system