Oryza sativa japonica (Japanese rice): 4333016
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Entry
4333016 CDS
T01015
Name
(RefSeq) small ribosomal subunit protein eS6
KO
K02991
small subunit ribosomal protein S6e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4333016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4333016
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Small subunit
4333016
Archaea
4333016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S6e
ATG14
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
4333016
NCBI-ProteinID:
XP_015630377
UniProt:
Q75LR5
A3AIN7
LinkDB
All DBs
Position
3:complement(join(15974986..15975212,15975446..15975718,15975814..15975922,15976009..15976066,15976825..15976889,15977013..15977018))
Genome browser
AA seq
245 aa
AA seq
DB search
MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG
FPMKQGVLTSGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSQDLSVINLVIVKKGD
NDLPGLTDTEKPRMRGPKRASKIRKLFNLAKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI
QRLVTPLTLQRKRARIAQKKQRIAKKKSEAAEYQKLLAQRLKEQRERRSESLAKRRSKLS
AATTA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgac
gaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatgct
cttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggt
ttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggggt
accccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgt
ggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgat
aatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggca
tctaagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaac
acttaccgcagaaccttcactaccaagaacggcaagaaggttagcaaggctcctaagatc
cagaggcttgtcactcccctgactcttcagaggaagagggcgagaatcgcccagaagaag
caaagaattgccaagaagaagtccgaggctgccgagtaccagaagctgcttgcccagagg
ctcaaggagcagagggaacgcaggagtgagagcttggcaaagaggaggtccaagctttct
gctgccaccaccgcataa
Oryza sativa japonica (Japanese rice): 4343945
Help
Entry
4343945 CDS
T01015
Name
(RefSeq) 40S ribosomal protein S6
KO
K02991
small subunit ribosomal protein S6e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4343945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4343945
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Small subunit
4343945
Archaea
4343945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S6e
BLOC1S3
ATG14
Motif
Other DBs
NCBI-GeneID:
4343945
NCBI-ProteinID:
NP_001390092
LinkDB
All DBs
Position
7:join(25949156..25949161,25949282..25949346,25950305..25950362,25950445..25950553,25950634..25950906,25951110..25951351)
Genome browser
AA seq
250 aa
AA seq
DB search
MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG
FPMKQGVLTAGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSQDLSVINLVIVKKGE
NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI
QRLVTPLTLQRKRARIADKKKRIAKKKSEAAEYQKLLAQRLKEQRERRSESLAKRRSKLS
SAAKAAATTA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgac
gaccagaagctgcgtgcattttttgacaagaggatctctcaggaggtcagtggcgatgct
ctgggcgaggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggt
ttccctatgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacaggggc
acaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtccgt
ggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggtgag
aatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagggcc
tccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtcaac
acctaccgcaggacattcactaccaagaatggcaagaaggtgagcaaggctcctaagatc
cagcgtcttgtgactcccctcaccctccagaggaagcgtgccagaatcgctgacaagaag
aagaggatcgccaagaagaagtcggaggctgctgagtaccagaagcttcttgcccagagg
ctcaaggagcagagggaacgccggagcgagagcttggcaaagaggaggtccaagctttct
tctgctgccaaggctgctgctaccaccgcctaa
DBGET
integrated database retrieval system
