Oryza sativa japonica (Japanese rice): 4333045
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Entry
4333045 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K12816
pre-mRNA-processing factor 17
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4333045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4333045
Spliceosome [BR:
osa03041
]
Complex C
Other components
Step II factors
4333045
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
4333045
NCBI-ProteinID:
XP_015632968
UniProt:
Q84MU4
Q0DRC2
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All DBs
Position
3:join(16419398..16421112,16422223..16422229)
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AA seq
573 aa
AA seq
DB search
MDLLQSSYTPDDEDDDEQQPLSSPDASPLRLPAKSAAPAVDDTALALSAAAASTSRPLDP
SLHLVPFNPTADQLWAPVLGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDEQYNTFH
RFGYAADPSGLHIVGDAQPSAEPDTVYNLAPSEHKRRRLQSKDEEGANQEPLPPEAKNPA
SDEWILRNKQSPWAGKKEAPPAELTEEQRQYAEAHAAKKAEKEARGEGKGEKSDMVAKST
FHGKEERDYQGRSWITPPKDAKASNERCYIPKRCVHEWVGHTKGVSAIRFFPKYGHLLLS
ASMDCKIKIWDVLESRTCMRTYMGHSKAVRDISFSNDGTKFLSAGYDRNIQYWDTETGQV
ISTFSTGKVPYVVKLNPDEDKQHVLLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITF
VDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNSNWLAAQSLDNQIL
IYSTKERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTL
KCHNGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccagtcgtcctacacgccggacgacgaggacgacgacgagcagcagccc
ctctcctcgccggacgcctcgccgctccgcctccccgccaagtcggccgcccccgccgtc
gacgacacggcgctcgcgctctccgccgccgccgcgtccacctcccgcccgctcgacccc
tccctccacctcgtcccctttaaccccaccgccgaccagctctgggcgcccgtcctcggg
ccccagcacccccacgcccccatctcctccgcctccggcaaccgcaaccacaagctcggc
cacgtcgaggacgccgccgtcctccccttcctcttcgacgagcagtacaacaccttccac
cgcttcggctacgccgccgacccctccggcctccacatcgtcggcgacgcccagccctcg
gccgagcccgacaccgtctacaacctcgccccctccgagcacaagcgccgccgcctgcag
tccaaggacgaggagggcgccaaccaggagcccctaccgccggaggccaagaacccggcg
tccgacgagtggatcctccgcaacaagcagagcccctgggccggcaagaaggaggcacca
cccgcggagctcactgaagagcagcgtcagtatgcggaggcgcacgctgccaagaaggcc
gagaaggaggcgcgcggcgaagggaagggcgagaagtctgatatggttgccaagagtact
ttccatgggaaggaggagagggattaccaaggacggtcatggatcacaccgcccaaggat
gccaaggcgagcaacgagcgctgctatattcccaagaggtgtgtgcacgagtgggttggg
cacaccaagggggtctcggcgattaggtttttccccaagtatggacaccttttgctgtct
gcgagtatggattgtaagattaagatctgggatgtgctcgagtcgaggacatgtatgcgg
acgtacatggggcactctaaggcggtcagagatatatcgttttctaatgatgggactaag
ttcttgagtgctgggtatgacaggaatatacagtattgggatactgagaccgggcaggtg
atctcgaccttctctactggcaaggtcccttatgtagtgaagctcaacccggatgaggat
aagcagcatgttctcctcgctgggatgagtgacaagaagattgtgcagtgggatatgaag
tcagggcagataacccaagagtacgaccagcacttgggagcagtcaataccatcactttt
gtagataataataggaggtttgtgacatcaagcgatgacaagtcgcttcgtgtgtgggag
ttcggcatcccagtggtgattaagtatatcagtgaaccacacatgcattcaatgccatca
atatcactgcacccgaattccaactggctggcagcacagagcttggacaatcagatattg
atatacagtaccaaggagaggtttcaacttaacaagaagaagcggtttgcgggtcacatt
gtggcaggttacgcttgtcaagtgaacttctcaccagatgggaggttcgtgatgtcagga
gatggtgaaggtagttgctggttctgggactggaaaagctgcaggagatttaagacgttg
aagtgccacaatggagtttgcattggatgtgagtggcatcccttggagactagcaaggtt
gcaacatgtggatgggatggcgtaattaagtactgggattga
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