Oryza sativa japonica (Japanese rice): 4333308
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Entry
4333308 CDS
T01015
Name
(RefSeq) small ribosomal subunit protein uS3y
KO
K02985
small subunit ribosomal protein S3e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4333308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4333308
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Small subunit
4333308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
UN_NPL4
Coilin_N
Motif
Other DBs
NCBI-GeneID:
4333308
NCBI-ProteinID:
XP_015632349
UniProt:
A3AJT6
Q75G91
LinkDB
All DBs
Position
3:complement(join(21955715..21955864,21955951..21956082,21956173..21956227,21957303..21957622,21957701..21957730))
Genome browser
AA seq
228 aa
AA seq
DB search
MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY
GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEEEELRPPVLIAEA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccagatcagcaagaagaagaagttcgtgagcgatggcgtgttctacgcggag
ctgaacgagatgctgacgcgggagctggccgaggacggctactccggcgtggaggtgcgc
gtgacgccgatgcgcacggagatcatcatccgggccacgaggacgcagaacgtgctcggc
gagaaggggcgcaggatcagggagctcacctccgtcgtgcagaagcgcttcaacttcccc
gagaacggcgtcgagctctacgccgagaaggtcgtcaaccgcggcctctgcgccatcgcc
caggccgagtccctccgctacaagcttcttggaggcctcgccgtccgcagggcttgctat
ggtgttcttcgctttgttatggagagtggtgccaagggttgcgaggtcattgtaagtgga
aagctcagggcccaaagagccaagtccatgaagttcaaggatggttacatgatctcatct
ggtcagccagtcaatgagtacattgactcggctgtgagacacgtgctcctgagacagggt
gttcttggcatcaaggtgaagatcatgctcgactgggaccccaagggcaaggttggcccg
accacccctctgccggatcttgtaaccatccatgctcccaaggaggaggaggagctgcgc
cctccggtgttgatcgctgaggcttaa
Oryza sativa japonica (Japanese rice): 4343869
Help
Entry
4343869 CDS
T01015
Name
(RefSeq) 40S ribosomal protein S3-1
KO
K02985
small subunit ribosomal protein S3e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4343869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4343869
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Small subunit
4343869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
UN_NPL4
Coilin_N
Motif
Other DBs
NCBI-GeneID:
4343869
NCBI-ProteinID:
NP_001409195
LinkDB
All DBs
Position
7:complement(join(25244831..25244989,25245083..25245214,25245301..25245355,25246158..25246329,25246433..25246580,25246677..25246712))
Genome browser
AA seq
233 aa
AA seq
DB search
MATHTQISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNV
LGEKGRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA
CYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLR
QGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEIPVAA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcacacgcagatcagcaagaagcgcaagttcgtggcggatggggtgttcttc
gcggagctgaacgagatgctgacgcgcgagctcgcggaggacggctactccggcgtcgag
gtccgcgtcacccccatgcgcaccgagatcatcatccgcgccacccgcacccagaacgtc
ctcggcgagaaggggaggaggatccgcgagctgacgtccgtggtgcagaagcggttcaac
ttcccggagaatggcgtcgagctctacgccgagaaggtgaacaaccgcggcctctgcgcc
atcgcccaggccgagtcgctccgctacaagctcctcggtggcctcgccgtcagaagggcg
tgctatggtgtgctcaggtttgttatggagagtggtgctaagggctgtgaggttattgtg
agtgggaagcttagggctcagcgtgctaaatccatgaagttcaaggacggatacatgatt
tcttctggttatcctgttaacttgtatattgactctgctgttagacatgttcttctgaga
cagggtgtgctgggtattaaggtcaagattatgcttgattgggatccgaagggcaagcaa
ggaccaatgactcctttaccggatcttgttaccatccatgcccctaaggatgaggatgag
ttttcaaagcctcttacagctgagatcccagttgctgcttaa
DBGET
integrated database retrieval system
