Oryza sativa japonica (Japanese rice): 4333574
Help
Entry
4333574 CDS
T01015
Name
(RefSeq) GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
4333574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osa03009
]
4333574
Ribosome biogenesis [BR:
osa03009
]
Eukaryotic type
Pre-60S particles
GTPases
4333574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
PRTRC_E
Motif
Other DBs
NCBI-GeneID:
4333574
NCBI-ProteinID:
XP_015627927
LinkDB
All DBs
Position
3:complement(join(25927318..25927376,25927806..25928923,25929022..25929101,25929733..25929789,25930107..25930200,25930553..25930639,25930728..25930817,25930928..25931214))
Genome browser
AA seq
623 aa
AA seq
DB search
MGGGGGGGGRKDRGEGLGRALTRQRNKAAAAAKERGHALALARRARQPLESVIEVSDIDA
VLQRAAEEYLLLGGGGGDGAGDVALSASLGSGLIDLDGTVETEEERRWLREEQEALHAGS
LKVPRRPPWTPQMTVEELDANEKRAFLEWRRNLARLEENEKLVLTPFEKNIDIWRQLWRV
LERSDLLVMVVDARDPLFYRCPDLEVYAQEIDEHKRTLLLVNKADLLPLNVRQRWAEYFK
QHDILYLFWSAKAATADLEGKKLSSYSMENWNTADLDTKIYGRDELLVRLQGEAEYIVNQ
KGALRAEEGHESSRSDSVSTRPKHVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTK
HFQTLVISEELILCDCPGLVFPSFSSSRHEMVACGVLPIDRMTKHRGAIQVVANRVPRNV
LEQIYKITLPKPKAYEQLSRPPTAAELLRAYCTSRGHVSHAGLPDETRAARQILKDYLDG
KIPHFELPPGDTDSETDPEETTDLEGSDTAVGATADHCASDEQDEEISQADPNISHVLSD
LESFDLASEVSKNSTKKKKEASYKHHKKPQRKKDRSWRVGNDGADGSAVVRVFQKPAVNF
ATVTVCRHMKAVAKTNSGDCLQY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggcggcggcggcggcgggaggaaggaccgcggcgaggggctcggccgcgcg
ctgacccggcagcggaacaaggccgcggcggcggccaaggagaggggccacgcgctcgcc
ctcgcccgccgcgcgcgccagccgctcgagtccgtcatcgaggtcagcgacatcgacgcc
gtgctccagcgcgccgcagaggaatacctcctcctcggtggtggtggcggcgacggtgcc
ggcgacgtcgccctctccgcctcgctcggctccgggcttatcgatctggatgggacggtg
gagacggaggaggagaggcggtggctgcgggaggagcaggaggcccttcacgcgggcagc
ctcaaggtgccccgccgaccgccatggactccccagatgacggtggaggagctcgacgcc
aacgagaagcgggccttcctggagtggcggaggaacctcgcaagattggaagagaacgaa
aaacttgtccttaccccttttgagaagaacattgatatctggagacagctctggagagta
cttgaacgcagtgatctgctggtcatggtagttgatgctcgagatcccttgttctaccgc
tgccctgatcttgaggtatacgcacaggaaattgatgagcacaagagaacactgcttctt
gtaaacaaggctgatcttttaccactgaatgtcagacagagatgggcagaatactttaag
caacacgatatcctttatctgttctggtctgccaaagctgctactgctgatttagaggga
aagaagttgagcagctattccatggaaaactggaatacagcagatcttgacaccaagata
tatggccgggatgaactcttggtgagattgcagggtgaagctgagtatattgtgaaccaa
aagggagcattaagagctgaagagggtcatgaatctagtcgttcagattctgtctcaaca
cgacccaagcatgtggttgttggatttgtaggctatccaaatgttgggaagagttcaacc
atcaatgctttggtaggccagaagagaactggtgtaacctctacacctggcaagaccaag
cattttcagacattggtaatctcagaagaactcattctctgtgattgtccaggtctggtc
ttcccttccttttcaagctcaaggcatgagatggtagcctgtggtgtcttgccaattgat
aggatgacaaagcataggggcgctattcaagtggtggcaaatcgtgtgccaagaaatgtt
ctagaacagatttataaaatcaccctgccaaagcccaaggcatatgaacaactgtcccga
ccaccaactgccgctgagttgctgcgggcgtactgcacatctcgagggcatgtcagtcat
gctgggctgcctgatgagactagggctgctagacagattctgaaggattacttagatgga
aagatcccacactttgagcttccccctggtgatacagattctgaaactgacccagaggaa
accactgaccttgaaggctcagatactgcagtaggtgccacagcagatcattgtgcttct
gatgaacaagatgaggaaatcagtcaagctgatccaaacattagtcatgtactaagtgac
cttgaatctttcgacctggccagtgaagtgtccaagaactctacaaagaagaagaaagag
gcatcctataagcatcacaagaaaccccagaggaagaaggatcgttcatggagggttgga
aatgatggcgctgatggatctgctgttgttcgggtgttccagaaacctgccgtcaatttt
gctaccgttacagtttgcagacacatgaaggcagtggctaaaacgaacagcggggattgc
ctgcagtactga
DBGET
integrated database retrieval system
