KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4334384
Entry
4334384           CDS       T01015                                 
Name
(RefSeq) 25.3 kDa vesicle transport protein isoform X1
  KO
K08517  vesicle transport protein SEC22
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130  SNARE interactions in vesicular transport
osa04145  Phagosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    4334384
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    4334384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4334384
Membrane trafficking [BR:osa04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    4334384
SSDB
Motif
Pfam: Longin Synaptobrevin DUF5713
Other DBs
NCBI-GeneID: 4334384
NCBI-ProteinID: XP_015632975
LinkDB
Position
3:complement(32911222..32915188)
AA seq 237 aa
MGSFGILVQFAVVSGLLDKMVKLTMVARVTDGLPLAEGLDDGRDQKDADFYKQQAKLLFK
NLSKGQHEASRMSIETGPYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNG
SQIETAARPYAFIKFDTFIQKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNVQEVLGVG
EKLDQVTEMSTRLTSDTRMYADKAKDLNRQALIRKYAPVAIVIGVVLMLFWLKNKIW
NT seq 714 nt   +upstreamnt  +downstreamnt
atgggttcatttggtattctggtgcagtttgcagtggtttctggccttcttgacaaaatg
gtgaagctgacaatggtagcacgtgtcactgatggccttccactggcagaagggttggat
gatggacgggatcagaaggacgctgacttttacaagcagcaagctaaacttcttttcaaa
aacttatcaaaggggcaacatgaagcctcgcggatgtcaattgagactgggccatacttt
tttcattacatcattgaggggcgagtatgttatctgacaatgtgtgaccgttcttatcca
aagaaacttgcattccagtacctagaagatctgaaaaacgaatttgaaagagtcaatggc
agtcaaatcgaaacagctgcaaggccatatgcctttattaagtttgacacattcattcag
aagactaagaaactttatttggacactagaacccagaggaatcttgcgaaattgaatgat
gagctctatgaggtgcatcagattatgactcgcaatgttcaagaagttcttggtgtcggt
gaaaagctagaccaggtcactgaaatgtcaactaggttgacttctgacacaagaatgtat
gcagataaggctaaggatctcaatcgccaggccttgattcggaagtatgcccccgttgcc
attgtgatcggtgtagttttgatgctcttttggttgaagaacaagatatggtaa

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 9270655
Entry
9270655           CDS       T01015                                 
Name
(RefSeq) 25.3 kDa vesicle transport protein isoform X1
  KO
K08517  vesicle transport protein SEC22
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130  SNARE interactions in vesicular transport
osa04145  Phagosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    9270655
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    9270655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    9270655
Membrane trafficking [BR:osa04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    9270655
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 9270655
NCBI-ProteinID: XP_015621696
LinkDB
Position
1:complement(7438797..7443247)
AA seq 199 aa
MVKLTMIARVTDDLPLVEGLDDGRDLKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPY
LFHYIIEGRVCYLTMCDCSYPKKLAFQYLEDLKNEFERVNGNQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNFQEVLGVGEKLDHEFAFAPYLCYAASF
IIVFSTMDLSMISVHMRLT
NT seq 600 nt   +upstreamnt  +downstreamnt
atggtgaagctgacaatgatagcacgtgttactgatgaccttccgttagtggagggatta
gatgatggtcgggatctgaaggatgctgacttctacaagcagcaagctaaactgttgttc
aagaacttatcgaaagggcaacatgaagcatcaaggatgtcaattgagactgggccatac
cttttccattacatcatcgagggccgtgtgtgctatttgacaatgtgtgactgctcttat
ccgaagaaacttgctttccagtacttagaagatctcaaaaatgaatttgagagggtcaat
ggcaaccaaattgaaactgctgcaagaccatatgcttttattaagtttgacactttcata
cagaagacgaagaagttgtatttggataccagaacccaaaggaacctggccaagttgaat
gatgagctttatgaggtgcaccagattatgactcgcaattttcaagaagttctcggtgtt
ggtgaaaaactagatcatgagtttgcctttgcaccttatctgtgttatgctgcatcgttc
atcatagtttttagcacgatggacttgtcaatgatttctgtgcatatgagattaacttga

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 9271327
Entry
9271327           CDS       T01015                                 
Name
(RefSeq) 25.3 kDa vesicle transport protein
  KO
K08517  vesicle transport protein SEC22
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130  SNARE interactions in vesicular transport
osa04145  Phagosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    9271327
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    9271327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    9271327
Membrane trafficking [BR:osa04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    9271327
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 9271327
NCBI-ProteinID: XP_015644474
UniProt: B9FRZ8
LinkDB
Position
6:complement(5012402..5016666)
AA seq 218 aa
MVKLTMIARVTDGLPLAEGLDDGRDQKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPY
YFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLRNEFERVNGSQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVTEMSTRLTSDTRI
YADKAKDLNRQALIRKYAPVAIVIGVVLMLFWLKNKIW
NT seq 657 nt   +upstreamnt  +downstreamnt
atggtgaagctgacaatgatagcacgtgttactgatggccttccactggcagaagggttg
gatgatggacgggatcagaaggacgctgacttttacaagcagcaagctaaacttctattc
aaaaacttatcaaaggggcaacatgaagcctcgcggatgtcaattgagactgggccatac
tattttcattacatcattgaggggcgagtatgctatctgactatgtgtgaccgttcttat
ccaaagaaactcgcattccagtacctagaagatctgagaaatgaattcgaaagagtcaac
ggcagtcaaatcgaaacagctgcaaggccgtatgcgtttattaagtttgacacattcatt
cagaagactaagaaactctatttggatactagaacccagaggaatcttgcgaaattaaat
gatgagctctatgaggtgcatcaaattatgactcgtaatgttcaagaagttcttggtgtc
ggtgaaaagctagaccaggtcactgaaatgtcaactaggctgacttctgacacaagaatc
tatgcagataaggctaaggatctcaatcgccaggccttgattcggaagtatgcccctgtt
gccattgtgatcggtgtagttttgatgctcttttggttgaagaacaagatatggtaa

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