Oryza sativa japonica (Japanese rice): 4334588
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Entry
4334588 CDS
T01015
Symbol
cfi, CHI
Name
(RefSeq) chalcone--flavanone isomerase
KO
K01859
chalcone isomerase [EC:
5.5.1.6
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00941
Flavonoid biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
4334588 (cfi)
Enzymes [BR:
osa01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.6 chalcone isomerase
4334588 (cfi)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chalcone
Motif
Other DBs
NCBI-GeneID:
4334588
NCBI-ProteinID:
NP_001405881
LinkDB
All DBs
Position
3:complement(join(35367799..35368017,35368099..35368322,35368399..35368560,35368658..35368754))
Genome browser
AA seq
233 aa
AA seq
DB search
MAAVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVP
ALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKA
AGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAI
ENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVSA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgtcggaggtggaggtcgacggcgtcgtgttcccgccggtggcccgcccg
ccgggctccggccacgcccacttcctcgccggcgcaggtgtgaggggagtggagatcgcc
ggcaacttcatcaagttcacggccatcggcgtgtacctggaggagggcgcggccgtgccg
gcgctggccaagaagtgggccggcaagtccgccgacgagctcgccgccgacgccgccttc
ttccgcgacgtcgtcaccggcgatttcgagaagttcacgagggtgacgatgatcctgccg
ctcaccggcgagcagtactcggacaaggtgacggagaactgcgtcgcggcgtggaaggcc
gccggcgtgtacacggacgccgagggcgcggccgcggacaagttcaaggaggccttcaag
ccccacagcttccctccgggcgcgtccatcctcttcacccactccccgcccggcgtcctc
accgtcgcgttctccaaggactcgtcggtgccagagggcgccgtggcggcggcggcgatc
gagaacagggcgctctgcgaggcggtgctggattccatcatcggcgagcacggggtctcg
ccggcggcgaagcggagcatagcggcccgcgtctcgcagctcctgaaggcggaatccacc
ggcgacgtggcggcggcggagcccgcgccggtgtccgcgtga
Oryza sativa japonica (Japanese rice): 4349607
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Entry
4349607 CDS
T01015
Name
(RefSeq) chalcone isomerase-like protein 2 isoform X2
KO
K01859
chalcone isomerase [EC:
5.5.1.6
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00941
Flavonoid biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
4349607
Enzymes [BR:
osa01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.6 chalcone isomerase
4349607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chalcone
Chalcone_2
Cupin_1
Motif
Other DBs
NCBI-GeneID:
4349607
NCBI-ProteinID:
XP_015616444
UniProt:
Q2RBC7
Q0IV33
LinkDB
All DBs
Position
11:complement(join(771813..771974,772084..772310,772596..772754,772852..772941,774803))
Genome browser
AA seq
212 aa
AA seq
DB search
MGTEIATVEVEGIPFPQEITVSKPLSLLANGITDIEIHFLQIKYNAIGVYLEKDNVLAHL
ESWKGKKAEELVQDDGFFQALVSAPVEKLLRIVVIKEIKGSQYGVQLESSVRDRLVSVDK
YEEDEEEALEKVTEFFQSKYFKPNSVITFHFPTTPGIAEISFVTEGKGEAKLTVENKNVA
EMIQKWYLGGESAVSPTTVKSLADQFAALLSA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagagatagccaccgtggaggtggagggcatcccatttcctcaggagataacc
gtcagtaagccattgtcactgcttgctaatggcatcacagacattgagatccatttcctt
cagatcaaatacaacgccatcggggtgtatcttgaaaaggacaatgtgctagcgcatttg
gagagttggaagggcaagaaggccgaggagcttgtgcaggatgatggcttctttcaggcc
ctagtttctgctccggtggagaaattgttgaggatagtggtgatcaaggagatcaaagga
tcacaatacggcgtgcagctggagagttcagtgcgtgaccgtctcgtgtcagtagacaag
tacgaggaggatgaagaagaggctctggagaaggtcaccgaattctttcagtccaagtat
ttcaagcccaactccgtcatcaccttccactttcctaccacccctggaattgcagagata
tcatttgtgacagaaggcaagggcgaggcgaagctgacagtggagaacaagaatgtggcc
gagatgattcagaagtggtacctgggtggagaatctgcagtttctccgacgactgtgaag
agcctggcagatcaattcgcagcactgctctctgcatga
Oryza sativa japonica (Japanese rice): 4351321
Help
Entry
4351321 CDS
T01015
Name
(RefSeq) chalcone isomerase-like protein 2 isoform X1
KO
K01859
chalcone isomerase [EC:
5.5.1.6
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00941
Flavonoid biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
4351321
Enzymes [BR:
osa01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.6 chalcone isomerase
4351321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chalcone
Chalcone_2
Cupin_1
Motif
Other DBs
NCBI-GeneID:
4351321
NCBI-ProteinID:
XP_015619943
LinkDB
All DBs
Position
12:complement(join(790906..791067,791177..791403,791679..791837,791942..792036,792403..792563))
Genome browser
AA seq
267 aa
AA seq
DB search
MLSFTNKTHCPTPHALSIFLLSSLFLSSTITASQGAKAVSVSAPLLINLPLQKNSVGTEM
ATVEVEGIPFPQEITVSKPLSLLAHGITDIEIHFLQIKYNAIGVYLEKDNVLGHLESWKG
KKAEELVQDDGFFQALVSAPVEKLFRIVVIKEIKGSQYGVQLESSVRDRLVSVDKYEDEE
EESLEKVTEFFQSKYFKPNSVLTFHFPNTPGIAEISFVTEGKGEAKLTVENKNVAEMIQK
WYLGGESAVSPTTVKSLADQFAALLSA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccttcaccaataaaacacattgccctactcctcacgctctttcgatcttcctc
ctctcctctctatttctctcatcaacaattaccgcatcacaaggagcaaaagcagtttca
gtttcggctccattgcttattaatttacctctacagaagaattcagtgggcacagagatg
gccaccgtggaggtggagggcatcccatttcctcaggagatcaccgtcagtaagccgtta
tcactgctagcccatggcattacagacattgagattcatttccttcagatcaaatacaac
gccatcggggtgtatcttgaaaaggacaatgtactagggcatttggagagttggaagggc
aagaaggcagaggagcttgtgcaggatgatggcttctttcaggccctagtttctgctcct
gtggagaaactattcaggatcgtggtgatcaaggagatcaaaggatcacagtacggcgtg
cagctggagagctcagtgcgcgaccgtctcgtgtcagtggacaagtacgaggatgaggag
gaagagtctctggagaaggtgactgaattctttcagtccaagtatttcaagcccaactcc
gtcctcaccttccactttcctaacacccctggaattgcagagatatcatttgtgacagaa
ggcaagggcgaggcgaagctgacagtggagaacaagaatgtggccgagatgattcagaag
tggtacctgggtggagaatctgcagtttctccgacgactgtgaagagcctggcagatcaa
ttcgcagcactgctctctgcatga
DBGET
integrated database retrieval system