Oryza sativa japonica (Japanese rice): 4334639
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Entry
4334639 CDS
T01015
Symbol
OsC3H25
Name
(RefSeq) zinc finger CCCH domain-containing protein 25
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4334639 (OsC3H25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4334639 (OsC3H25)
Spliceosome [BR:
osa03041
]
Complex B
Other components
RES complex
4334639 (OsC3H25)
Complex C
4334639 (OsC3H25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
zf-CCCH_DUS3L
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
RRM_5
zf-CCCH_10
DUF1866
CTHRC1_C
Motif
Other DBs
NCBI-GeneID:
4334639
NCBI-ProteinID:
NP_001405899
LinkDB
All DBs
Position
3:join(35686122..35686294,35686397..35686506,35686626..35686813,35687573..35688040)
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AA seq
312 aa
AA seq
DB search
MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG
EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE
EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDRHH
EPPMSHKKFPSSAGEQRFPDRAKEENKSTGREGQSSRSEAYKDRDSRLRHSDRGSKDHDR
YRHDRSPERSRGDRQRNNDRYAQGRDEKSERYRSEVKHDEGDQKRSRRDTDSSGHYERRG
NEDSERYRKSRR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctctgacgcaggtgaagaggacgcaggtaatcaaccagaaggaagcgcttctg
ggcatcggcgaggacgggtcgtggcacgccaagttcaaggactccgcctacgtcttcgtc
ggcggcatcccctacgacctcaccgagggcgacctcctcgccgtgttcgcgcagtacggc
gaggtggtcgatgtgaacctcgtgcgcgacaagggcaccggaaaatccaagggatttgcg
tttcttgcgtacgaggaccagaggagcacgattcttgctgttgataatttgaatggagct
aaagttcttgggaggattgtaagagttgatcatgtgagcaaatacaagaaaaaggaggag
gaggatgaggaggagctgcagaagaagagggaggcccgtggcgtgtgctacgcgttccag
aaaggcgaatgcaaccgtggagcttcctgcagatattcccatgatgagcagaggaatgca
aacactggttggggttctaaggaggagagcaaagcaagatgggagcatgacagacaccat
gagccaccgatgagccacaagaagttcccttcgagtgctggggaacaaaggttccctgac
agagctaaagaggagaacaaatcaactggcagggaagggcagtcctcaagatcggaggca
tacaaagaccgtgattccaggcttaggcatagtgatagaggttcaaaagatcatgacagg
tataggcatgatagatcacctgagagatcaagaggtgataggcagagaaacaatgacaga
tatgcccaaggaagagatgaaaaatcagaaaggtacagatctgaagtgaaacatgatgaa
ggagaccagaagcgatcaaggcgggacactgattctagtggacattatgaaaggaggggt
aacgaagattcagaaaggtacaggaaatcacggagataa
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