Oryza sativa japonica (Japanese rice) (RefSeq): 4334917
Help
Entry
4334917 CDS
T01015
Name
(RefSeq) arginine decarboxylase 2
KO
K01583
arginine decarboxylase [EC:
4.1.1.19
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00330
Arginine and proline metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
4334917
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
4334917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Motif
Other DBs
NCBI-GeneID:
4334917
NCBI-ProteinID:
XP_015633833
UniProt:
Q7XRA1
LinkDB
All DBs
Position
4:463662..467284
Genome browser
AA seq
623 aa
AA seq
DB search
MAKKNYGQVYNILGWGDPYFTVNSHGHLAVKPHGRDTMSGQDIDVHSVIHRALATTITTN
DGDKKPQFPMILRFPDVLKNRLDSLHAAFHGAVDSTGYASRYQGVFPIKVNQNKAVVQDL
VTFGHGYSYGLEAGSKPELLIAMSCLAKAKPGAYLVCNGYKDADYVALALSARAMGLNAI
IVLEMEEELDIVVEQSARLGVEPVIGVRAKLLTKIPGHFGSTAGKHGKFGMLADKIYEVA
GKLKKMGKLHWLKLLHYHVGSMIPTTDIVYNAAAEAAGIYCALVKEHGATGMTTLDCGGG
LGVDYDGTRSGSSDMSVAYGLEQYASSIVQAVRLTCDDNGVPHPVLCTESGRAMASHHSM
IILEALSAIPEPQDEEDTHHRLLSKIQDLSSKQPRTAHTVNGGGGVDAMHSHAVELKKHG
IEMYKLAKKLSKRVTGDANGIYNYHMNLSVFSLVPDFWGIGQLFPMMPVSRLNEKPTING
TLVDITCDSDGKVEKFIRDAVTLPLHPLDDAAAEHGGYYVAALLSGAYQEALACKHNLFS
GPTLVRVESAGGGGAFKIVSVELGPTAEEVIGTMRYDVKNDISDVIEKVATENGVWPMVE
PLMKKGLTTMPYLNDYKPPKTTF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagaactacggtcaagtgtacaacatcctcgggtggggcgacccctacttc
accgtgaactcccatggccacctcgccgtcaagccccatggccgcgacaccatgtccggc
caggacatcgacgtccactccgtcatccacagagctctcgccaccaccatcaccaccaac
gacggcgacaagaagccccagttcccgatgatcctccgcttccccgacgtgctcaagaac
cgcctcgactccctccacgccgccttccatggcgccgtcgacagcaccggctacgcgtcc
aggtaccagggcgtgttccccatcaaggtgaaccagaacaaggccgtcgtccaggacctc
gtcaccttcggccatggctacagctacggcctcgaggctggctccaagccggagctgctc
atcgccatgagctgcctcgccaaggccaagcccggagcttacctggtctgcaatggctac
aaggacgccgactacgtcgcgctcgcgctctccgcgcgcgccatgggcctcaacgccatc
atcgtgctggagatggaggaggagctcgacatcgtcgtcgagcagagcgccaggctcggc
gtcgagccggtcatcggcgtccgcgccaagcttctcaccaagattccgggacacttcggc
tccacggccggcaagcacggcaagttcgggatgctcgccgacaagatctacgaggtggcc
ggcaagctgaagaagatggggaagctgcactggctgaagctgctgcactaccatgtcggc
tccatgatcccgaccaccgacatcgtgtacaacgcggcggccgaggccgcaggaatctac
tgcgcgctggtgaaggagcacggcgcgacggggatgaccacgctggactgcggcggcggg
ctcggcgtcgactacgacgggacgcggtcgggcagctccgacatgtcggtggcgtacggg
ctcgagcagtacgcgtccagcatcgtgcaggcggtgcggctcacgtgcgacgacaatggc
gtcccccacccggtgctctgcaccgagagcggccgcgccatggcgtcgcaccactccatg
atcatcctcgaggcgctctcggcgatcccggagccgcaggacgaggaggacacccatcac
cggctgctcagcaagatccaggacctctcctccaagcagccaagaactgctcataccgtc
aatggcggcggcggcgtggacgccatgcactcgcacgccgtggagctgaagaagcacggg
atcgagatgtacaagctggcgaagaagctgtccaagagggtgaccggcgacgccaacggc
atctacaactaccacatgaacctctccgtcttctccctcgtccccgacttctggggcatc
ggccagctcttcccgatgatgccggtgagccggctgaacgagaagccgaccatcaacggc
acgctggtcgacatcacctgcgacagcgacggcaaggtagagaagttcatccgcgacgcc
gtgacgctgccgctgcacccactcgacgacgcggcggcggagcacggcggctactacgtg
gcggcgctgctgtcgggggcgtaccaggaggccctggcgtgcaagcacaacctgttcagt
ggccccacgctcgtgcgcgtcgagagcgccggcggcggcggcgcgttcaagatcgtctcc
gttgagctcggcccgacggcggaggaggtcatcggcacgatgaggtacgacgtgaagaac
gacattagcgatgtgatcgagaaggttgcgacggagaatggcgtgtggccgatggttgag
ccgctgatgaagaaagggctgaccaccatgccctacctcaacgattacaagccccccaaa
accaccttttaa
Oryza sativa japonica (Japanese rice) (RefSeq): 4340008
Help
Entry
4340008 CDS
T01015
Name
(RefSeq) arginine decarboxylase 1
KO
K01583
arginine decarboxylase [EC:
4.1.1.19
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00330
Arginine and proline metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
4340008
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
4340008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Motif
Other DBs
NCBI-GeneID:
4340008
NCBI-ProteinID:
XP_015643038
UniProt:
Q9SNN0
LinkDB
All DBs
Position
6:complement(1674319..1677424)
Genome browser
AA seq
702 aa
AA seq
DB search
MPALAVDAAAPVAHAFACDAARFPAPLLGPAAAAAAVAEKPDAAAWSADLSSALYNVDGW
GAPYFFVNDDGDVAVRPHGAATLPGQEIDLAKVVAKAAGPRSGGGLGLPLPLLVRFPDVL
RHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGLEAGSKPE
LLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELDIVVDASR
RLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCLQLLHF
HIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQTDMSVAY
SLEEYAAAVVAAVGRVCDRKGVAHPIICSESGRALVSHHSVLVFEAFSASAPGRIDPATG
YLLDELTDDCHADYRNLMAAAVRGDFDTCALYADQLKRRCADQFKDGVLGLEHLAAVDSL
CEIVARGMGAAEPPRTYHINLSVFTSLPDMWAIGQMFPIIPIQRLGERPAVDGVLSDLTC
DSDGKVDHFIGGRHSLPLHELPVHGTRGYYLGMFLGGAYQEALGGLHNLFGGPSVVRVSQ
SDGPHCFAVTRAAAGPSCADVLRSMQHEPEVMFEVLKQRTDGATAAALARAFGAMPYLSF
DPEAAAMASGESSGMSSDSEGSAAGAAEEDDDEWEFMRGLTV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgctcgccgtggacgccgctgcacctgtcgcgcacgccttcgcgtgcgacgcg
gcgcgcttccccgcgccgctgctgggccccgccgccgcggctgcggcggtggcggagaag
ccggacgcggccgcgtggtcggccgacctctcgtccgcgctgtacaacgtggacggctgg
ggcgcgccgtacttcttcgtcaacgacgacggcgacgtcgccgtgcgcccgcacggcgcc
gcaaccctgcccgggcaggagatcgacctcgccaaggtggtggccaaggccgccggcccg
cgctccggcggcgggctcggcctgccgctccccctgctggtgcggttccccgacgtgctc
cgccaccgcgtggaggccctgaacgcggcgttcgactacgccgtgcgctccaccggctat
ggcgggaggtaccagggcgtgtaccccgtcaagtgcaaccaggaccgccacgtcgtggag
gacattgtggagttcggcgagccgttccgcttcggcctggaggccggctccaagcccgag
ctgctgctcgccatgagctgcctcgccgcgcgcggcaacccggacgccctgctcatctgc
aacggctacaaggacgacgagtacgtctcgctcgcgctcatcgcgcgcaccatggggctc
aacacggtcatcgtgctcgagcaggaggaggagctcgacattgtggtcgacgctagccgc
cgcctcggcgtgcgcccggtggtcggcatgcgcgccaagctgcgcaccaagcacgccggc
cacttcggctccacgtccggggagaagggcaagttcggcctcaacgccgcgcagattctc
tccgtcgtcgccaagctcaagacccttggtatgctcgactgcctccagctcctgcacttc
cacattggctcccagatcccgaccactgctctgctcggcgatggcgtcggggaggccgcg
cagatctactgcgagctcgcccgcctgggcgcggccatgcgcgtcatcgacgttggtgga
ggcctcggcattgactacgacgggagtcactcggcgcagaccgacatgtccgtggcatac
agcttggaggagtacgcggcggccgtggtggccgccgtcggccgcgtctgtgaccgcaag
ggcgtcgcgcatcccatcatctgcagcgagagcggccgcgcgctggtgtcgcaccactct
gtcctggtgttcgaggccttctcggcttcggcgcccggccgcattgacccggccacgggc
tacctgctcgacgagctcaccgacgactgccacgccgactaccgcaacctcatggccgcc
gcggtgcgcggcgacttcgacacctgcgctctgtacgccgaccagctgaagcggcgctgc
gccgatcagttcaaggacggcgttcttggcctggagcacctcgccgcggtggacagcctc
tgcgagatcgtcgcccgcggcatgggcgccgccgagccgccgcgcacgtaccacatcaac
ctgtccgtgttcacctccctgccggacatgtgggcgatcgggcagatgttcccgatcatc
ccaatccagcgcctcggtgagcgccctgcggtcgacggcgtcctctccgacctcacctgc
gacagcgacggcaaggtcgaccacttcatcggcgggaggcacagcctgccgctgcacgag
ctccccgtccacggcacccgcggctactacctcggcatgttcctcggcggcgcctaccag
gaggccctcggcggcctccacaacctgttcggcgggccgagcgtggtgcgcgtgtcgcag
agcgacgggccgcactgcttcgccgtcacgcgcgcggcggcggggccgtcgtgcgccgac
gtgctccgctcgatgcagcacgagcccgaggtgatgttcgaggtgctcaagcagaggacc
gacggcgccaccgccgccgcgctcgccagggcgttcggcgcaatgccgtacctgtcgttc
gacccggaggccgcggcgatggccagcggggagagcagcggcatgagcagcgactcggag
gggtcggccgccggcgcggcggaggaggatgacgacgagtgggagttcatgcgggggctc
accgtgtga
DBGET
integrated database retrieval system