KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4335637
Entry
4335637           CDS       T01015                                 
Name
(RefSeq) putative ribosome biogenesis GTPase RsgA 1
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00730  Thiamine metabolism
osa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    4335637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4335637
Enzymes [BR:osa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     4335637
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.-
     4335637
Ribosome biogenesis [BR:osa03009]
 Prokaryotic type
  GTPases
   4335637
SSDB
Motif
Pfam: RsgA_GTPase MMR_HSR1 AAA_16 ABC_tran AAA_29 AAA_23 AAA_22 Adeno_IVa2 AAA_21 Septin SMC_N AAA_18 Roc ATP-synt_ab Guanylate_kin AAA_30 ATPase_2 IIGP AAA_15 AAA_7
Other DBs
NCBI-GeneID: 4335637
NCBI-ProteinID: XP_015634817
UniProt: A0A0P0W9L9
LinkDB
Position
4:18702259..18707747
AA seq 515 aa
MFGKPRLSASLTPRHPHTAHRENSTRNHAKILDPPRNPPRHQKNPPPGVACVRAVRAAPH
PKTPRRAAAKCRSSPPPPPPPPPPATLPHLPLLLPRVLLPRRASSHHGPLHLRLLPAAAA
APLPPPPSSPDELLPDQATGLVAASQANFMRVIVGAAPRGVEGARPGGDLLCVVRALLKK
IRRRVLVGDRVLIGAVDWAGGRGVIEGVFERRAEVADPPVANVDRLVLLFALDQPQPEPA
TLTRFLVDAESTGIPFVLVFNKVELVDDKTISYWRDRMKSWGYDPLFLSVDQKSGLSALE
ETLEGQTTVIVGPSGVGKSSLINALRSNQNISEEDPIHKLVEQNSKWFGEQRVGTVSKKS
GKGKHTTRHVSLLPIAGGGFLADTPGFNQPSLMKVTKKGLAETFPEIRKMLAENEPSKCL
FNDCVHLGERGCVVKGDWERYPYYLQLLDEIKIRESFQLRTFGTKREGDVRYKTGVMGVK
QAEPRLQLKKHRRVSRKKINQSILDDIDDELDEDN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgtttggtaaaccacggttgtcagccagccttaccccacggcatccgcacaccgcacac
cgcgagaattccacgcgaaatcacgcgaaaatcctcgaccccccgcgaaaccccccgcgt
caccagaaaaatccgccccccggcgtcgcgtgcgtgcgtgcggtgcgcgccgcgcctcac
ccaaaaaccccccgccgcgccgccgcgaaatgccgctcctcccctccccctcccccgcca
ccgccgccgccggccacgctgccccacctccccctcctcctcccgcgcgtcctcctgcca
cgccgcgcttcctcccaccacggccccctccacctgcggctgctccccgcggcggcggcg
gcgcccctccccccgccgccgtcatccccggacgagctgctcccggaccaggcgacgggg
ctggtggcggcgtcgcaggccaacttcatgcgggtgatcgtcggcgccgcgccgcgcggg
gtggagggggcgcgcccgggcggggacctgctgtgcgtggtgcgcgccctcctcaagaag
atccgccgccgcgtcctcgtcggggacagggtgctcatcggggccgtcgactgggccggc
ggccgcggggtgatcgagggcgtcttcgagcgccgcgccgaggtggccgacccgcccgtc
gccaacgtcgaccgcctcgtcctcctcttcgccctcgaccagccccagcccgagcccgct
acgctcaccaggttcctcgtcgacgccgagtccaccgggatacctttcgtgctcgtcttc
aacaaggtcgagcttgtggacgacaagaccatatcatactggagagataggatgaagagt
tggggatacgatccactatttttaagtgttgatcagaaatcaggattatccgctcttgaa
gaaacattggaaggacagacaactgtaattgttggtccaagcggtgttggaaagtccagt
ctgatcaatgctttgagaagcaaccagaacatctcagaagaagatcccatacataaacta
gttgagcagaatagtaaatggtttggtgaacaacgggtcggtaccgtgtcgaagaaaagc
ggcaaaggaaagcacacaacacgtcatgtttcattgcttcctatagctggtggaggtttt
cttgctgatactccaggatttaaccagcctagcctgatgaaagtgaccaagaagggtctt
gcagaaacatttccagagataagaaagatgcttgcagagaatgagccctcaaaatgttta
tttaatgactgtgttcaccttggtgagcgtggatgtgttgtgaaaggtgactgggaaagg
tatccatactatctacagttgcttgatgaaatcaaaatcagagaatcattccagttaaga
acatttggaacaaaaagagagggtgatgtcagatacaaaacaggtgtcatgggtgtaaag
caagcagagcctcgtcttcaactcaaaaagcacagaagggtatcaagaaagaagattaac
cagtcaattcttgatgatattgatgatgagctcgacgaagacaactag

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4346355
Entry
4346355           CDS       T01015                                 
Name
(RefSeq) probable aminopyrimidine aminohydrolase, mitochondrial
  KO
K22911  thiamine phosphate phosphatase / amino-HMP aminohydrolase [EC:3.1.3.100 3.5.99.-]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00730  Thiamine metabolism
osa01100  Metabolic pathways
osa01240  Biosynthesis of cofactors
Module
osa_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    4346355
Enzymes [BR:osa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     4346355
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.99  In other compounds
    3.5.99.-
     4346355
SSDB
Motif
Pfam: TENA_THI-4
Other DBs
NCBI-GeneID: 4346355
NCBI-ProteinID: XP_015649966
UniProt: Q0J3L2 A0A0P0XID3
LinkDB
Position
8:complement(28347914..28351755)
AA seq 609 aa
MRGLLRRVYLRLPPFPPATSLYYWSRTRPAAAGPNHPIPRRMSTSSTAAAVVAEGSAARR
FWIAAASREAAFAAYTPFLVSLAAGALRLDSFRQYIAQDAYFLHAFARAYEMAEECADDD
DDKATIVVLRKAILRELNLHASVLQEWGVDPNKEIPPIPATTKYTDFLLATSTGKVDGGK
GSDKMVTPFEKTKIAAYTVGAMTPCMRLYAYLGKELAVFLKQDENHPYKKWIETYASSDF
ENNALQIEELLDKLSVSLTGEELEIIGKLYQQAMRLEVEFFSAQPVDQPVVAPLSRYCGP
KDKLLIFCDFDLTCTVVDSSAILAEIAILSHQKASQGGADSSLDRTKSADLRNSWNMLSN
QYMEEYEQCIASLLPPEEARSLDYDQLYKGLEVLSQFEKLANSRVVDSGVLRGMNLDDIR
KAGERLILQDGCKIFFQKIGKTRENLNLDVHILSYCWCADLIRSAFSSVGCLDGLNIHSN
EFAFEGSVSTGHINRQMESPLDKAEKFKSIKSDVGSTGTLLSVYIGDSVGDLLCLLEADI
GIVVGSSTTLRRVGKQFGVSFVPLFTGLVEKQRRIEKEESSIFKARSGILYTVSSWSEVQ
AFILGNDFS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcgcggcctcctccgccgtgtctacctccgcctcccccctttccctcctgccacctct
ctttattattggtcaagaacaagacctgcagctgcagggcccaaccaccccatccctagg
cgcatgtcgacgtcctctactgccgcggcggtcgttgccgagggctccgccgctcgccgc
ttctggatcgccgccgcctcgagggaggccgccttcgccgcctacacgcccttcctcgtc
tccctcgccgccggggccctccgcctggattccttccgccaatacatcgcccaggatgcc
tacttcctccacgccttcgcccgcgcctatgagatggccgaggagtgcgccgatgacgac
gacgacaaggccaccatcgtcgtcctcaggaaggccatcctccgcgagctcaacctccac
gcttccgtccttcaggaatggggagtcgatcccaacaaagaaatccctccaatcccagcc
acaactaagtacactgatttcttacttgcaacttccactggaaaggttgatggtgggaaa
ggttctgataaaatggtcacaccattcgagaagacgaaaattgctgcatacactgttggg
gctatgaccccatgcatgaggctttatgcgtatctgggcaaagaacttgcagttttcttg
aaacaggatgaaaatcacccatacaagaaatggattgagacttatgcatccagtgatttt
gagaataacgcactccaaatagaagagttgcttgataaactaagtgtctctctaactggc
gaggagcttgagattattgggaagctctaccagcaagctatgaggctggaagttgagttc
ttctctgctcagccagtagaccaacctgttgtagctccactctcaagatattgtggtccg
aaagataagctcttgatattttgtgattttgatttgacatgcactgttgttgattcatct
gccattttggcggagattgcaatcttgtcacaccaaaaggctagtcaaggtggggctgat
agttcccttgatcgtacaaaatcagcggacttgagaaattcatggaacatgctctcaaat
caatacatggaagagtatgagcaatgcatagcaagcttgcttcctccagaagaagcaagg
tcactagactatgatcaactgtataaaggtttggaggtgctatcgcagtttgagaaactt
gcaaactctagggtggttgattctggtgtcctgaggggaatgaatttagatgacatccga
aaagctggagagaggcttattctgcaagatggatgcaaaattttttttcaaaagattggc
aaaacaagggagaacctcaatttagatgtccatattctttcctattgctggtgcgcagat
cttataaggtcagctttttcatcagttggttgtctagacgggctgaacatacattcaaat
gagtttgcttttgagggatctgtttcaactggtcatattaacagacaaatggagtctcct
ctggacaaagctgaaaagttcaagagcatcaaaagcgacgtgggtagtacagggacatta
ttgtcagtctatattggggactcggttggagatttgctttgcttgttggaggcagatatt
ggtattgttgttggatcaagcacaaccttgcggagagtgggcaaacagtttggtgtttca
tttgttcctctgttcactgggttggtagagaagcagaggcgaatagaaaaggaagaatca
tccatcttcaaggcacggtctggaattctttatacggtttctagctggtcggaggtacag
gctttcatcctgggaaatgatttcagctga

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