KEGG   Oryza sativa japonica (Japanese rice): 4336098
Entry
4336098           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K14827  pre-rRNA-processing protein IPI1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    4336098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4336098
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    4336098
SSDB
Motif
Pfam: TPR_TEX10 Ipi1_N TOR1L1_N HEAT_GCN1 HEAT_MROH2B_C MC7
Other DBs
NCBI-GeneID: 4336098
NCBI-ProteinID: XP_015636295
UniProt: Q0JCJ0 A0A0P0WB84
LinkDB
Position
4:complement(join(23814248..23814382,23814693..23815016,23815549..23815680,23815758..23815906,23816069..23816203,23816294..23816428,23816530..23816623,23816732..23816851,23817629..23817715,23817806..23817919,23818053..23818181,23818499..23818803,23819493..23819556,23819724..23819870,23820169..23820327,23820581..23820750,23820888..23821010,23821122..23821194,23821298..23821390))
AA seq 895 aa
MGRPKGGAAASSSSSKKPKAKPKQRGGVDFKKYKHKVGRKLPPPKNATDTEIKSRAIVLP
EQSMASERAGMAVNKRGLTLRELLQQTGHYNANVRRAALNGIKDLVAKHPSELKLHKVAI
VEKLQERICDTDKVVRESLFSILQSLVFPSLKEDNAISTRSTLFLLMANILNGMTHLSMD
IQLMSFRFLELVVINFPSSFPGYAEQVFNNFLAVLSNDRIHLQDKSKLNSVLSGLGQCLS
QVAYATENGDASNRLVHNLSGRELWKCTLDEDNSGSRAFAMSNILMKLQNLFQILVNSVE
VSVSELFAKSTIDAQSSEALLSALHCLDLICNICIQEVKKPQMKFGRSKIQVGPEWLKSS
VLVYAKKLWGVNRSFHEKGDDRYYVFNLKIAEIFLCLSACMDNTIFPADEFCQFVSSLLA
KAKTLRNKDTMEKHLSPLITFIPDLVSNAPDDSKGYLLEAFTDAFWDCKVDCKLIFPYLD
AVGKMLFPEKTGILFVENDSGSEYHGVWVKELPGILLQSIDKAPSVTKVVLELLLRIGQY
FPTMEFGNLRSFIKLFGVKSSSGTIELGPFVNLPRDCQELAISCLYYFSNLLPDTMELLA
SCCLSDVLEPTILFRIIEVLQSTYKAGNLHITEQLSFLSLLMARFRVHPGSFSTQDNSQK
GSNMNTFKSLNRLILNSLSEMGDGSLVLELMWDNLSKEIAQIPSLHNMNGLFRIIVTLDA
GTCKLMNEDAIKIIAGYLIDAAMDLSKTIELGFQSDRTRLFQYFIKPCIIIFCQNEKVLC
CALEMLKSFATGDDHVLSSASKLNYPGELSHRICVVTTILIFLCNDGKLHKNLSLGKCVI
KGILQHTRHLMDSNVLDVTYEDKQKLRFAFEQLKTKALQLNCWDRSELEGFSSTT
NT seq 2688 nt   +upstreamnt  +downstreamnt
atggggaggccgaagggcggcgccgcggcgtcctcctcctcgtcgaagaagcccaaggcg
aagccgaagcagcgcggcggcgtcgacttcaagaagtacaagcacaaggtggggcggaag
ctgccgccgccgaagaatgccaccgacacggagatcaagtccagagcgatcgtgctgccg
gagcagagcatggcgtcggagagggctggcatggccgtgaacaagcgcgggctcacgctg
cgggagctcttgcagcagacgggccactacaatgccaatgtgcgccgagctgcgctgaat
gggataaaggatcttgttgctaagcatccatcagagcttaaacttcacaaggttgcaatt
gttgagaagctacaggaaagaatatgtgacactgacaaggtggttcgtgaatccttgttc
agtatactgcagtctctcgtcttcccatctttgaaagaggacaatgcaatatcgacacgc
agtacactgtttctgctgatggccaatattttgaacggaatgacccatctatccatggat
atccagttaatgtctttcagatttttggagcttgttgttattaatttcccatcctccttt
ccaggatacgctgaacaggtcttcaacaactttcttgctgtactgagcaatgacaggatt
catctccaggataagagtaaacttaacagtgtccttagtgggctcgggcagtgtctttct
caggttgcttatgcaacagaaaatggtgatgcatcaaatcgactggttcataatctttct
ggtagggaactttggaaatgtactcttgatgaagataactcaggaagtagagcatttgcg
atgtccaatatattaatgaagcttcaaaacctcttccagattctcgttaattctgtagag
gtctcagtttcagaactttttgcaaagtcaactattgatgctcagtcaagtgaagcatta
ttatcagctcttcactgtctggatctaatatgtaacatatgtattcaagaggtaaagaaa
cctcagatgaaatttggaagatccaaaattcaggttggacctgaatggttgaaaagttcc
gtgttagtatatgcaaagaaattgtggggagtaaaccgttcattccacgaaaagggagat
gacagatattatgttttcaatctgaagattgctgaaatatttttgtgcttgagtgcatgt
atggacaacaccatatttccagctgatgaattttgccagtttgtatcttctctacttgca
aaggcaaaaacacttcgcaataaggataccatggaaaagcatttgagcccacttataact
ttcataccagatcttgtatccaatgccccagatgactcaaaaggatatttattagaggca
tttacagatgcattctgggattgcaaggtggattgcaagctgattttcccatatttggat
gcagtgggaaaaatgctgtttcctgaaaaaacaggaatattatttgtggaaaatgattca
ggctctgaataccatggtgtgtgggtaaaagagctacctggaattctactacaatcaatt
gacaaagccccctcagtaacaaaggttgttttggagctacttctaagaattggacagtac
ttccccacaatggagtttggaaatctgcgttccttcattaagttatttggtgttaaatca
tcatcaggaaccatagagcttggtccattcgttaaccttccacgtgattgccaagaactt
gccatttcatgcctttattacttctccaacctgcttcccgacacaatggagctgttggct
tcttgttgcttaagtgatgtgctggaacccaccatattgtttagaattattgaggttcta
cagtcaacatacaaggctgggaatttacatataacagagcaactcagtttcttgtcattg
ctaatggcacgattcagagttcatcctgggtctttctctacccaggataattcccagaag
ggctcaaatatgaatacttttaaatcattgaaccgcctaattttaaattctctatctgaa
atgggtgatggctccctggttcttgagttaatgtgggataatttatctaaagagattgca
cagataccatctttacataacatgaatggattgtttagaattattgtcacacttgatgca
ggaacttgtaagctcatgaacgaagatgctataaaaattatagctggctacttgattgat
gctgctatggatttgtctaaaaccattgagcttggctttcaatctgataggacaagacta
tttcaatactttataaagccttgcataatcatattttgccagaacgagaaggttctttgc
tgcgcattggagatgcttaaatctttcgcaacaggagatgaccacgtgctttcatctgca
tccaagttaaactacccaggagagctttcacatcgaatttgtgttgtcacaactatactc
atattcttatgcaatgatggaaaactccataaaaacctttctttgggcaaatgtgttatt
aaaggtatcctgcaacatacaaggcatctcatggattctaatgttcttgatgtaacatat
gaggacaagcagaagttaagatttgcatttgagcaactaaagacgaaagcattgcagttg
aactgctgggacagaagtgagctggaagggttttcaagcaccacgtaa

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