Oryza sativa japonica (Japanese rice) (RefSeq): 4337536
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Entry
4337536 CDS
T01015
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4337536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4337536
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
4337536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
SOAR
DUF1319
CorA
Prefoldin
Motif
Other DBs
NCBI-GeneID:
4337536
NCBI-ProteinID:
XP_015637649
UniProt:
Q9FW24
A0A0P0WH83
LinkDB
All DBs
Position
5:174443..177544
Genome browser
AA seq
232 aa
AA seq
DB search
MKKIFGAKKNQEPPPSIQDATDRISKRGDSVDDKIKKLDAELARYKDQIKKTRPGPAQEA
IKARAMRVLKQRRMYEGQRDMLYNQTYNLDQVAFASEGLKDAQQTMTAMKAANKELKGMM
KTVKLEDIDSLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEELMGELDALEADMDFESN
SVPSYLQPDKESDLDSELNLPAAPTGHTPAPPNRQQEDELGLPTVPQASIRS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcttcggcgccaagaagaaccaggagcccccgcccagcatccaggatgcc
accgatcggatcagcaagaggggcgactccgtggacgacaagatcaagaagctggacgct
gagctcgcccgctacaaggaccagatcaagaagaccaggccaggccccgcccaggaggcc
atcaaggcacgcgccatgagggtcctcaagcagcgcagaatgtacgaagggcagcgtgac
atgctgtacaaccaaacatataaccttgaccaagttgcttttgcatcagagggacttaaa
gatgctcagcaaacgatgactgcaatgaaggcagccaataaagagctgaaaggaatgatg
aaaactgtcaagcttgaagatatagatagcttgcaagacgagatgatggatcttatggat
gtgagcaatgaaatacaggaaactctcggaagaagctacaatgtccctgatgacattgac
gaggaagaacttatgggggagcttgatgctttggaagccgacatggactttgaatcaaat
tcagtcccctcgtaccttcaaccagataaggaatcagatctagattctgagcttaacttg
cctgctgcaccaacgggtcacacacccgccccaccaaaccggcagcaggaggacgaattg
ggattgccgacagtgccacaagcatcgatccgtagttga
Oryza sativa japonica (Japanese rice) (RefSeq): 9266052
Help
Entry
9266052 CDS
T01015
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9266052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
9266052
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
9266052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Prefoldin
DUF948
SOAR
Motif
Other DBs
NCBI-GeneID:
9266052
NCBI-ProteinID:
XP_015617267
UniProt:
Q9FTZ4
C7IW85
LinkDB
All DBs
Position
1:complement(170743..173188)
Genome browser
AA seq
295 aa
AA seq
DB search
MKSNPINGMPDRAFPGPIHSRIQHGAQPPVPHSPSPSHLTPNTLSPRCRCRRRRRRRRTH
APEMKKIFGAKKSKDPPPSIQDATERINKRGESVDDKIKKLDEELGRYKEQIRKTRPGPS
QDAIKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELK
GMMKTVKIEDIDNMQDEMTDLMDVSNEIQESLGRSYNIPDDVDEEELMGELDALEADMEF
ESSAVPSYLQPDKESDFDAELNLPAAPTAPAAVPVSRQQVDELGLPAVPRASIRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaatccgattaatggtatgccggatagggccttccctggcccaatccacagc
agaattcagcatggagcccaacctcccgtcccccattccccttctccatctcatctcact
cccaacactctctctcctcgctgccgctgccgccgccgccgccgccgccgccgcacacac
gcgccggaaatgaagaagatctttggagccaagaagagcaaggacccgcccccatccatc
caggacgctaccgaacgaatcaacaagaggggggagagcgtggacgacaagatcaagaag
ctggacgaagagctcggccgttacaaggagcagatcaggaagacacgccctggaccctcc
caggacgccattaaggcccgcgccatcaggcttctcaagcacaagcgcatgtacgaagaa
cagcgcaacatgctctacaaccagacctataatctcgaccaagtcgctttcgctgccgat
ggcctcaaagacgctcagcagaccatgaatgccatgaaggccgccaataaagagctcaag
ggaatgatgaagacagtcaagattgaggacatcgataatatgcaagatgaaatgactgac
ctgatggatgtgagcaacgaaatacaagaatcccttggtagaagctacaacatccctgac
gatgttgatgaggaagaactaatgggagaactggatgctttggaggctgatatggagttt
gagtcaagtgcagtcccatcgtatcttcaaccagacaaggaatccgatttcgatgcagag
cttaatttgccagctgcacctaccgctcctgcagcagtcccagtaagcaggcagcaggtg
gatgagctaggattgccagcagtccctcgagcatcaatccgcagttag
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integrated database retrieval system
