| Entry |
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| Name |
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
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| KO |
| K14325 | RNA-binding protein with serine-rich domain 1 |
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| Organism |
osa Oryza sativa japonica (Japanese rice)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4337561
03015 mRNA surveillance pathway
4337561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:osa03019]
4337561
Messenger RNA biogenesis [BR:osa03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
4337561
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:join(325160..325329,325423..325511,325895..325941,326035..326115,326241..326409,326611..326830,326909..326974,327424..327540,327635..327707,327821..327858,327962..328034)
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| AA seq |
380 aa
MATKPRRRSPSLSSSSSTSYSRSPASPSSSPSRSRSPPRPAGGARSPSPPPPPPPPRKAS
PPPESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADA
EKALLYLDGGQIDGNVVKVRFALPPQQQRAAASPKALHPSPKRDVVDHNKVGPSAEKATK
QQPRKPASPQRKPAPSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRRPGS
PIRRRSPSPPPRRLRSPRHLSPRRDRGSPIRRRSPLPRRRLTPPRRMWSPPRRPQSLRHR
SRSPIHRPIRSPSRSISPRRGRGPPVRRGRSSSSYSDSPTPPRRGPRRVLRSRSPRRPLR
GRSASSYSRSSSSSGSPIRN |
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| NT seq |
1143 nt +upstreamnt +downstreamnt
atggccaccaagccccgccgccgctccccgtcgctctcctcctcctcctcaacatcctac
tcgcgctcccccgcatcgccctcctcctccccgtcgcgcagccgctcccctccccgcccc
gcggggggggcccgctcgccttcgccgccgccgccaccgcctcctcccaggaaagcgtct
ccgccccctgagtccaccgtcctccatgttgaccatctctccaggaacgtcaatgaggat
catctcaaggagatttttgaaaattatggtgaagtcgtcaatgtggagctctccatggat
agggtggtcaatcttccccgtgggtatggatatgttgagttcaagaatagagctgatgca
gagaaggctcttctttacttggatggtggccaaattgatggaaatgttgttaaagtcaga
ttcgcgcttccaccacagcagcaaagagctgctgcttctccaaaagctcttcacccttca
ccaaaaagggatgtggttgatcataataaagttggtcctagtgctgaaaaggccaccaaa
cagcagcccaggaaaccagcatctcctcaaagaaagccagctccatctccaagaaggcga
tctcctccaagtcgaagagttgaatcacctaggtgtaggcctgattctcctccaattcgc
cgtcgaacagctccttctccaatcaggcatggtggaactcctagcaggagaccaggatcc
ccaatcagaaggcgctcaccctctccgccccctcgaagactaagatcaccaaggcaccta
tcaccaagaagagatcggggcagtccaatccgcaggcgctccccattgcctcgtagaagg
ctgactcctccaaggaggatgtggagtcctcccagaagaccacagtcacttcgccatcgc
agtagatctcccattcaccgaccaattcgctccccttccagatcgatttctccacgcagg
ggtcggggtcctcctgtgcgccgtggacggtcatcctcatcgtattctgattcacctact
cctccaagaaggggaccaagaagggtgctcagaagtcgcagtcctagaaggcctttaaga
ggaagaagtgcctctagctacagccgtagtagcagcagctcaggttcccctatccgcaat
taa |
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