Oryza sativa japonica (Japanese rice): 4337585
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Entry
4337585 CDS
T01015
Name
(RefSeq) pumilio homolog 1
KO
K17943
pumilio RNA-binding family
Organism
osa
Oryza sativa japonica (Japanese rice)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
NABP
PUF_NOP9
DUF2524
Motif
Other DBs
NCBI-GeneID:
4337585
NCBI-ProteinID:
XP_015640341
UniProt:
B7F8F5
LinkDB
All DBs
Position
5:complement(join(527995..528038,528134..528308,528442..528636,529273..529383,529477..529689,530216..530323,530405..530546,530941..532202,532626..533024))
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AA seq
882 aa
AA seq
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MVTEMATRGEAAAAAAADRDMELFRSGSAPPTVEGAMASAAAAAGDVFLDDELRADPVYQ
SYYYSNAHLNPRLPPPLLSKEDWRSAQHRLRSSALGGIGDGRRQPAAAAQGDGLVGLPGI
DLDRQGSFSSIFQESSYQLDMGKQGADRNISDFLDSSRPQYALHRETSRAMGGLQSDSNI
QSLAEVQNNDSSAHTYASLLGSSLSRSASPDPELVRRVPSPCLPPIGVKVSADDKKNNGG
SSSFRRSSSAIGESDNLIAALSGMNLSSSGAASGQQTVTQSELYQDVDNVRKFLFDRQGD
QSNGNQQHSYMKHPEQGHFKAPDGYSANSPNSSMIRNQINAASFTSFDNLSAGSGFASPR
IGSRSPGGTLSSRQNLVGGSNFLNYNGIGSPNAATSLQTAIDPSYIQYLQAAEIAAQLAA
SCDDPLMASGHLGSSYMDLLGPQKAYASPLLQSQKNCGYYGNLGFGLGYSGSPLMSPVLP
SSPAAPGSPLRHGERSMRMQSGIRNFGGSFGSWNPDLGGKMNINMMPSLLEEFKSNKSKS
YELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQ
KFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMR
CVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQ
QIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVI
EKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQREAILTR
IKAHLNTLKKYTYGKHIVARVEKLVAAGEKRLGLQPACTSAA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggagatggcgacgcgcggggaggcggcggcggcggcggcggcggaccgggac
atggagctcttccggagcgggtccgcgccgccgacggtggagggcgcgatggccagcgcc
gccgcggccgccggcgacgtgttcctggacgatgagctccgggccgacccggtgtaccag
agctactactactccaatgcgcacctcaacccgcgcctcccgccgccgctgctctccaag
gaggactggcgctcggcgcagcaccgcctccgctcctccgccctcggcgggatcggcgac
ggcaggaggcagccggccgcggcggcgcagggggatgggctcgtggggttgcccgggatc
gacctcgatcggcaggggagcttctccagtatcttccaggagagctcgtatcagctggac
atgggtaagcagggcgccgaccgcaacattagtgactttctggattcttctcggccacag
tatgctctgcatcgtgagactagtagagctatgggtggtctgcagagtgacagcaatata
caaagcttggctgaagttcagaacaatgattcatcagcacatacatatgcctctctttta
ggatcatctctttctagaagcgcatctccagatcctgagcttgttaggagggtccccagt
ccttgcctccctccaattggtgtgaaagtcagtgctgatgataagaagaacaatggtggt
tcatcttccttccgtcgaagttcgtctgctattggtgaatctgataatctgatagctgct
ttatctgggatgaatttatcatcatctggagcagctagtggacagcaaactgtgacccag
tctgagctctaccaggatgttgataatgtccgtaagtttctatttgatcgtcagggtgat
caatcaaatggcaaccagcaacactcctatatgaaacatcccgaacaaggacattttaag
gcacctgatggttactctgcaaactcgcctaattcttctatgataagaaatcaaattaat
gctgctagtttcacatcgtttgacaatctgtctgctggatcaggctttgcttctcctagg
atcggttctaggtccccaggtgggactttatcttcaaggcagaatttggttggtggatct
aactttctgaattacaatggaattggaagtccaaatgcagcaacttctcttcaaacagcc
attgatccgtcatatattcagtaccttcaggcagctgagattgctgcccaactcgcagct
agctgtgatgatcctctcatggccagtggccatctgggaagttcttatatggatttactt
ggtcctcagaaagcttatgctagtccattgcttcagtcacagaagaactgtggctactat
ggaaaccttggatttggccttggttattctggaagtcctttgatgagtcctgttcttccc
tcttcccctgctgcacctggtagtccacttaggcatggtgaacgcagcatgcgcatgcaa
tcaggtataagaaactttggtggttcctttggttcatggaatcctgacctaggtggaaag
atgaacatcaatatgatgccttcactcctggaggaattcaagagcaacaaaagcaaatct
tatgagctctcagaaattgctggtcatgttgttgagttcagtgctgatcaatatggaagc
cgattcatacagcaaaagctagaaacggccagtactgaagagaaggacatggtcttttca
gaaatcatgcctcaagctctcacgttgatgaccgatgtatttggaaattatgttgttcag
aagttctttgagcacggaagccctacccagataaaggaattggccgaccagcttattgga
cgtgttcttgctctcagtcttcagatgtatggatgccgggttatacagaaggctatagag
gttgttggtttagatcagcagactaaaatggttgctgagctggatggacacgtcatgcgc
tgtgtacgtgatcaaaatgggaaccatgtaatacagaaatgcatagaatgcatccctcaa
catgctatccagttcattgtctcaacattctatggtcaagttgtgatgttatccactcat
ccatatggttgtcgggttatacagagggtgctggagcattgtgatgatcctacaacacag
caaataatgatggatgagattctccagtccgtttgcttgctggctcaagatcaatacggc
aactacgttgttcagcatgtactggagcacggaaaaccacatgagagatctgctattatc
gagaagttaattggacaaatagttcaaatgagccagcaaaagtttgcctcaaatgtcatt
gagaagtgcttagcctttgggaatcctgtagaacgacagattttgatcagtgaaatgctt
ggatccactaatgagagtgaacaccttgaggtaatgatgaaagatcagtttgcaaactat
gtggtgcagaaggtgctagagacttgtgatgatcagcagagggaggcgatccttacaagg
ataaaagcacatctgaacacgctgaagaagtatacctatgggaagcacatagtagcacgc
gtagagaagcttgttgctgctggagagaagcgactagggcttcaaccagcatgcaccagt
gccgcctga
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