Oryza sativa japonica (Japanese rice): 4337816
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Entry
4337816 CDS
T01015
Name
(RefSeq) PWWP domain-containing protein 1 isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00270
Cysteine and methionine metabolism
osa01100
Metabolic pathways
osa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
4337816
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
4337816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4337816
03032 DNA replication proteins [BR:
osa03032
]
4337816
03036 Chromosome and associated proteins [BR:
osa03036
]
4337816
Enzymes [BR:
osa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
4337816
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
4337816
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
4337816
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
4337816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
4337816
NCBI-ProteinID:
XP_015639812
LinkDB
All DBs
Position
5:join(2824955..2825870,2829520..2829603,2830071..2832376)
Genome browser
AA seq
1101 aa
AA seq
DB search
MPPIPSRSGPKLPKSPIPKSPKPKPKSRDPATKSRVSPPLRRMSDPAPAAAASTATATAA
AGSGAAASGSGAIVHPGGGGAWPRGVRFGDMVWGKVKSHPWWPGHVYSITLTSDGEVRRG
YRDGLVLVAFFGDSSYGWFEPHELLPFEEHFREKFAQPGGRNFPTAIDEAADEVARRAAL
AFLCPCHRPNAARPHELDPRYLLVDVPGFDTDAEYHPEQVAAEREKIDPRALLDYLKGAA
VEQLDAAELIGKPKRHIPAVQMSSMLEAYRLSRYALKDPTYAQAFGMDYDEAQAAKTALE
KKAREGKRRVWWDRKTQEEPQDDQGESSNTTPAGRPAKGRKKAAENPGGRRRKGSAASTA
ARLMEKIMPSAAAMKPRAKKKDQYLLKRRDDARAPPPPSMPDAFPAAPMAPALDDVPPGF
PSDPPTPPLPSSTLAADEEFLLQRRTPPPLLSAPPTPLALPPAAAGQVGDGGAPTDAATA
AAAPKKATKPKKAAARKREREEPADAAAAAAAGGVAGEPKKKKKKKLAELNGVAVAAAGK
PGLLPAKVDHDLKQVISELQSLPLVASYVAGRRSISDEARSFLLAFRSKSFKKSHENDPP
EDNKASKPNAATAADGQKPPAKKKPAARPGDTTAASAKVAGVKRAPSDRQEELATKKKAK
LNKIKTLATDKKAAGLELAAAAPAAARKNDAIAARKKEKEPALAPAIKTPSPTALMMKFP
PKTTLPSVASLKARFARFGPLDVDGIRVYWKSHMCRVIYRFKSDADVALKYARANTTMFG
QVAPNYYLRGVESDGDLAADAAPPPPQQRSELRLMETAPFRPGTSGGNCAPLPLSRAVPA
RAVVGQQPKSILKKTVTDDGAPSAAALRDAPRVKFMLDAGDSKLEPPPPAAPASGGGDAA
APLAKSATKSVGFAPPPLQPPARPAQHPHLQPPARPAQQPPRPPVTQPLPPPPPLHQHQP
YQPRHTDALPLPLPLPPPPPPPFSVQQQQLPPPPPYHLRHSIDGMHHQLPGPPLPPSYQH
RAAGGVVFPGQHQQQPYRPNNDTQLGLPGAGAAAGDVTPAWKRGGREFDEELMRVMRGIA
KMVEPLTDKNGNFPYHLFTSA
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgatcccctcccgttcggggcccaagctcccgaaatcccccatccccaaaagt
cccaaacccaagcccaaatcgagagaccccgcaaccaaatctagggtttcgcctcctctc
cgcaggatgtccgatcccgcccccgccgccgccgcctccaccgccacggccacggccgcc
gccggctccggcgccgcggcgtccggctccggcgccatcgtgcaccccggaggcggcggc
gcgtggccgcgcggcgtccggttcggcgacatggtctggggcaaggtcaagtcccacccg
tggtggcccggccacgtctacagcatcaccctcaccagcgacggggaggttcgccggggc
taccgcgacggcctcgtcctcgtcgccttcttcggcgactcgagctacggctggttcgag
ccgcacgagctcctccccttcgaggagcacttccgggagaagttcgcccagccgggtggc
cgcaacttccccaccgccatcgacgaggccgccgacgaggtcgcccgccgcgccgccctc
gcgttcctctgcccctgccaccgccccaacgccgctcgcccccacgagctcgacccgagg
tacctcctcgtcgacgtgcctggattcgacaccgacgccgagtaccaccccgagcaggtt
gccgcggagcgggagaagatcgatccgcgggcgctgctggactacctgaagggtgccgcc
gtggagcagctggacgccgccgagctgatcggcaagcccaagcggcacatcccggcggtc
cagatgagctccatgcttgaggcctaccgcctatccagatacgcgctgaaggatcccacc
tacgcccaagctttcgggatggactacgacgaggcgcaagcggcgaaaacagcgttggag
aagaaagctcgagaaggcaagagacgtgtttggtgggaccggaaaacacaggaggaaccc
caggatgatcagggcgagtcttcaaatacaactcctgcaggtcgtccggcgaagggccgc
aagaaggcggcggagaatcccggcggccgccgccggaagggcagcgcggccagcacggcg
gcgaggctcatggagaagatcatgcccagcgcggcggcgatgaagcccagggccaagaag
aaggaccagtacctgctcaagcgccgcgacgacgcgcgcgccccgccgccgccgtccatg
ccggacgccttcccggcggcgcccatggcccccgctctcgacgacgtcccgccggggttc
ccttccgatcccccgacgccgccgctccccagcagcaccctcgccgccgacgaggagttc
ttgctgcagaggcgcactccaccgccgctgctgtccgcgccacccaccccgctcgcgctt
cctcccgccgccgccgggcaggtcggcgacggcggcgcgcccacggacgccgccaccgcc
gccgcggcgccgaagaaggcgaccaagccgaagaaggcagccgcccgcaagcgcgagcgc
gaggaacccgctgacgccgccgccgctgccgccgcaggcggcgttgccggcgagcctaag
aagaagaaaaagaagaagctcgccgagctcaacggcgtggcggtcgccgccgccggcaag
ccggggttattgcctgctaaggtagaccatgatctgaagcaggtaatatccgagcttcaa
agccttcctctcgttgcctcctatgtcgccggccgccgcagcatctctgacgaagctcgc
tccttcctcctcgccttccgctccaagtctttcaagaagagccatgagaacgatccaccc
gaggacaacaaggcctctaagcccaatgccgccaccgccgccgacggccagaagccgccg
gcgaagaagaagccggccgcgaggcccggcgacaccaccgccgcctccgccaaggttgcc
ggcgtcaagcgcgccccgtctgatcgccaggaggagcttgccaccaagaagaaagccaag
ctcaacaagatcaagacgctcgccactgacaagaaggccgccggtctggagctcgccgcc
gcggcgcctgcggcggcgaggaagaatgatgcgatcgctgccaggaagaaggagaaggag
ccggctctggctccggcgatcaagacgccatcgccgacggcgctgatgatgaagttcccg
ccgaagaccacgctgccatcggtggcctccctcaaggcgaggttcgcgcggttcgggccg
ctcgacgtcgacggcatccgcgtctactggaagtcccacatgtgccgcgtcatctacagg
ttcaagtccgacgccgacgtcgcgctcaagtacgcgcgcgccaacaccaccatgttcggc
caggtcgcgcccaactactacctccgcggcgtcgagtcggacggcgacctcgccgccgac
gctgcacctccgcctccgcagcagcgctccgagcttcgcctcatggagacggccccgttc
aggcccgggacctccggcggcaactgcgcgccgctgccgctgtccagggccgtgccggcg
cgcgcggtggttgggcagcagcccaagtcgatcctcaagaagacggtcaccgacgacggc
gcgccgtcggcggcggcgctccgtgatgccccgcgggtgaagttcatgctcgacgccggg
gacagcaagctcgagccgccgccacctgcagcgccggcgagcggcggcggagacgccgcc
gcgccgctcgccaagagcgccaccaagtcggtcgggttcgcgccaccgcctctccagccg
ccggcgcgcccggcacagcacccccacctgcagccgccggcgcgtccagcgcagcagcct
cctcgcccgccggtgacccagccactccctccgccgccgcctctccatcagcaccagcca
taccaacctcgccacaccgacgcgctgccgctgccgctgccgctgccgccgccaccgccg
ccgccattctccgtgcagcagcagcagctccctccaccgccaccataccacctccgccac
agcatcgacggaatgcaccaccagctccccggaccaccgctgccgccgtcgtaccagcat
cgcgccgccggcggcgtcgtcttccccggacagcatcagcagcagccataccgccccaac
aacgacacccagctcggcctccccggcgccggcgccgccgccggtgacgtcacgccggcg
tggaagagaggagggagagagttcgacgaggagttgatgagggtgatgcggggaatcgcc
aagatggtggagccattgacggacaagaacggcaacttcccctaccacctcttcacctca
gcttga
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