Oryza sativa japonica (Japanese rice): 4338303
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Entry
4338303 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4338303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4338303
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
4338303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
4338303
NCBI-ProteinID:
XP_015640793
UniProt:
Q0DJF8
A0A0N7KKG7
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All DBs
Position
5:join(12933155..12933274,12933385..12933573,12933702..12933869,12933950..12934004,12934128..12934186,12935266..12935391,12937763..12937891,12937968..12938022,12938115..12938290,12938385..12938468,12939084..12939107)
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AA seq
394 aa
AA seq
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MASSNVSTVYISVIDDVISKVRDDFISYGVGDAVLNELQALWEMKMLHCGAISGTIDRSK
AAPAPSAGTPGAGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQTPLPGTDAG
MYNIPTGPSDYAPSPISDVRNGMAMNGADPKTGRPSPYMPPPSPWMTQRPLGVDVNVAYV
ENREDPDRTGQPPQLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGSADQIVEFVVSKD
NAQQLWSSIVNKQGTATKESSTKETIIAPTIPQRDGMDDYNDPFYFQGVPTEDYNTPGES
SEYRAPTPAVGTPKPRNDVGDDDEPPLNEDDDDDDELDDLEQGEDEPNTQHLVLAQFDKV
TRTKNRWKCTLKDGIMHLNGRDVLFNKATGEFDF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcaacgtctccacggtctatatctccgtcatcgacgacgtcatctccaag
gtccgcgacgacttcatctcgtacggcgtcggcgacgctgtcctcaacgagctccaggcg
ctctgggagatgaagatgctgcactgcggcgcaatctccgggaccatcgaccgctccaag
gcggctcccgcgccgtccgcaggcacccccggcgctggaaccaccccgccggtacacgac
ctaaacgtgccctacgaggccacctcggaggagtacgccacccccacagcggacatgctg
ttccccccgacgccgctacaaaccccgatccagacccctcttccaggaacagatgcaggg
atgtacaacattcccactgggccttcagactatgccccttccccgatcagtgacgtgagg
aatggcatggccatgaatggagctgatccaaagactggtcgcccgagtccctacatgcct
ccaccctctccctggatgactcagaggccgctgggcgttgatgtgaatgtcgcttatgtg
gagaaccgtgaggacccagataggaccggacagcctccgcaactaactaaggattttcta
atgatgtcctctgggaaacgcaagagggatgaatatcctggtcagctcccttctggttct
tttgtgccacaacaagatggaagtgcagatcagatagttgaatttgttgtctcaaaggac
aacgcacaacaactttggagttccattgtgaacaagcaaggaacagcaacaaaagaatct
tccacaaaggaaacaataattgctccaacgattcctcaacgggatgggatggatgactat
aatgatccattttacttccaaggagttccaactgaggattacaatacccctggagaatcg
tcggaataccgagctcccacaccggctgttggaacaccaaaaccgagaaatgatgtaggc
gatgatgatgagcctccgcttaatgaagatgacgatgatgatgatgagttagatgacctt
gagcaaggggaggatgagcctaacacacagcaccttgtcctcgcacagtttgacaaagtg
acaaggacaaagaaccgctggaaatgcactttgaaggatggaatcatgcatttaaatggc
cgagatgttctattcaacaaggctaccggcgaatttgatttttga
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