Oryza sativa japonica (Japanese rice): 4338508
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Entry
4338508 CDS
T01015
Name
(RefSeq) importin subunit beta-1
KO
K14293
importin subunit beta-1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4338508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osa03009
]
4338508
03036 Chromosome and associated proteins [BR:
osa03036
]
4338508
Ribosome biogenesis [BR:
osa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
4338508
Pre-60S particles
4338508
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
4338508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IMB1
HEAT_EZ
HEAT
IBN_N
HEAT_GCN1
TPR_IPO5
CEP104-like_TOG
PDS5
HEAT_RRP12_N
HEAT_GCN1_C_2
TPR_SYO1
TPR_DNAAF5
Vac14_Fab1_bd
GNC1_N
MMS19_N
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
4338508
NCBI-ProteinID:
XP_015639277
UniProt:
B9FH83
Q9ZWR5
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All DBs
Position
5:join(16795402..16797812,16797910..16798105)
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AA seq
868 aa
AA seq
DB search
MNITQILLSAQSADGNLRVVAEGNLKQFQEQNLPNFLLSLSVELSDNEKPPESRRLAGII
LKNSLDAKDSAKKELLIQQWVSLDPSIKQKIKESLLITLGSSVHDARHTSSQVIAKVASI
EIPRREWQELIAKLLGNMTQQGAPAPLKQATLEALGYVCEEISPEHLEQDQVNAVLTAVV
QGMNQTELSPEVRLAAVKALYNALDFAESNFANEMERNYIMKVICDTAVSKEVEIRQAAF
ECLVAIASTYYVHLDPYMQTIFNLTANAVKGDEEAVALQAIEFWSTICDEEIELQEEYEG
SDDANSTVNYRFIEKALPSLVPMLLETLLKQEEDQDQDDNVWNISMSGGTCLGLIARTVG
DAIVPLVMPFVEGNITKPDWHCREAATFAFGSILEGPSVEKLAPLVQAGFDFLLNTTKDP
NSQVRDTTAWTLGRVFELLHSPASANPIITSANLTRIMTVLLESSKDVPNVAEKVCGAIY
FLAQGYEDAESISSVLTPFLPNLIAALLSAADRADTTHFRLRASAYEALNEIVRVSNISE
TSGIIGQLLQEIMRRLNLTFDLHILSSGDKEKQSDLQALLCGVLQVIIQKLSSSDAKSII
AQTADQLMFLFLHVFACHSSTVHEEAMLAIGALAYATGTDFVKYMPEFFKYLEAGLQNYE
EYQVCSISVGVVGDICRALEDKILPFCDGIMTVLLKDLSNSMLNRSVKPPIFSCFGDIAL
AIGDNFEKYLPYAMPMLQGAAELLAVLDHTDEDMVDYGNQLRRGIFEAYSGILQGIKGAK
AQLMIPYASHLLQFTEAVYKDRSRDESVTKAAVAVLGDLADTLGSSSKDLFKSNLFHVEF
LRECHDLDDEVRDTASWAQGMINQALVS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgggtagta
gcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctctccttg
tcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggtattatc
cttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcagcaatgg
gtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacgctagga
tcttcggtgcatgatgctaggcatacctcatcacaagtcattgccaaggttgcatccatt
gagatcccccggcgtgaatggcaagaactcattgccaaattattgggcaacatgacacaa
cagggtgcacctgctccactaaagcaagcaactctagaggccttagggtatgtctgtgag
gagatttctcctgaacacttggagcaggatcaggtgaatgctgttctaactgctgttgtc
cagggaatgaaccagacagagctaagccctgaagtccgtcttgcagcagttaaagcccta
tataatgctcttgattttgctgagagcaactttgcaaatgaaatggaaaggaattatatc
atgaaggtaatttgtgatactgctgtatcgaaggaagtggagatcaggcaggcagccttt
gaatgccttgttgcaattgcttccacatattatgtacacttggatccttatatgcaaacc
attttcaacctgacagctaatgctgtcaaaggagatgaggaagcagttgcacttcaagct
attgagttctggagcactatttgtgatgaagagattgagctccaagaagaatatgaggga
tctgatgatgctaattctactgtaaattatcgcttcattgagaaggccctcccttcactt
gttccgatgctgctagaaactctgttaaagcaagaggaagatcaagatcaggatgataat
gtatggaacatttccatgagtggtgggacatgccttgggctcattgctagaactgttggt
gatgcgattgtgcctcttgtgatgccttttgttgagggtaacatcacaaaaccagattgg
cattgtcgtgaggcagctacttttgcatttggttctatccttgaaggtccatctgtggag
aaacttgctcccctggtacaggctgggtttgacttcctgctgaacacaacaaaagacccg
aatagtcaggtaagggacaccactgcatggactcttgggagggtatttgagctcctgcat
tctccagccagtgcaaatccaattataacaagcgcaaaccttactcgtatcatgactgtc
ttgctggaaagtagtaaggatgttccaaatgtggctgagaaagtctgtggagccatatat
tttcttgcccaaggttatgaagacgcagagtcgatttcatctgtgcttacaccttttctt
cctaatctcattgctgctctcctttctgcggcggatcgtgctgataccacccacttcagg
cttcgtgcatcagcttatgaagcattgaatgagattgtgagagtcagcaacatatctgaa
acgtcaggcattataggtcagttactgcaggagatcatgaggagattgaatctgacgttt
gatctccatatactttcatctggtgacaaggaaaagcaaagtgatcttcaggcattactg
tgtggtgtactgcaggtcatcattcagaaattgagcagctcggatgctaagtcaataatt
gcccagactgctgatcagttgatgtttctgtttctgcatgtttttgcttgccacagctct
actgtacacgaagaagcgatgcttgccatcggtgctcttgcttatgccactggtacagat
tttgtgaaatacatgcctgagtttttcaagtatctggaagctggcttgcagaattatgaa
gagtaccaagtctgttccatctctgttggagtggtgggtgatatttgccgtgccttggaa
gataaaattttgcccttctgtgatgggattatgactgttcttctcaaggacctgtcaaac
tcgatgcttaatcgttctgtgaagcctccgattttctcatgctttggagacattgctctt
gctattggtgataattttgagaaataccttccttatgctatgccaatgcttcaaggagct
gccgaacttcttgctgttttggaccatacagatgaggatatggttgattatggtaaccag
ctcagacggggaatctttgaagcttactctggcatactccagggtataaagggtgcaaaa
gctcagttgatgataccctatgcaagccatctattgcagttcactgaagctgtctacaag
gaccgcagcagggatgagagcgtgacaaaggctgcagttgctgtcctgggggatcttgcg
gacacactcggctcaagctcaaaggatctgttcaaaagcaacctcttccatgttgagttc
ctgagggagtgccacgatttggatgatgaagttagggacaccgcgtcatgggcccaggga
atgataaaccaagcactggtttcttaa
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