Oryza sativa japonica (Japanese rice) (RefSeq): 4338695
Help
Entry
4338695 CDS
T01015
Name
(RefSeq) isoamylase 2, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00500
Starch and sucrose metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
4338695
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
4338695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
4338695
NCBI-ProteinID:
XP_015637296
UniProt:
Q6AU80
LinkDB
All DBs
Position
5:complement(19155009..19157745)
Genome browser
AA seq
800 aa
AA seq
DB search
MASLPAPPTPLGSCPRGRGGGRVVARPRRAGLACAARSCYRFRTDDDGVVDVAVSGEDGD
GGGGGYAVSVEVPGTRGREGGLVLRASGSGEGVPLAPAAGGASLAAELSFDPTRAPFYLS
FLLTDASGAEIRTHRKTSFRVPVGVGPGSPAPLGMSISGDGAVNFAVYSKNANAVSLYLY
AAAVGGGGGDEPALEIDLDPYIHRTGNVWHVSLASVDGYVSYAFCCGGIRRPLLDPYAKV
IGDFVSSNSVYDEGVTAPSMRCFASLAIAPSYNWGRDRHPRLPLEKLVVYRANVALFTKD
RSSGLPDDAAGTFTGLSAKVEHFRSLGVNAILLEPVFPFHQVKGPYFPYHFFSPMNLYSS
KGLSVSAIKSMKDMVRVMHRNGIEVLLEVVFTHTAEGESECQTISMRGIDNSSYYIANGI
AGCKASILNCNHPVTQKLILDSLRHWVLDFHVDGFCFINAPFLVRGPGGEYLSRPPLLEA
ITFDPVLSMTKIIADPWSPLDISNVQFPFPHWKRWAEVNTRFSIDVRKFLKREALISDLA
TRLCGSGDLFSTRGPAFSFNHVSRNSGLSLVDLVSFSNDDLLSESSWNCGEEGPSENSAV
LQTRLRQIRNFLFILFVSLGVPVLNMGDECGHSAAGSVSYKDRGPLNWRGMKTTFVKEVT
GFISFLTALRSRRGDIFQRREFLKLENIHWYGSDLCEPGWDDPTSNFLCMHINAEVDEMA
ADSVRGDLYICFNANEESVSAALPALAEGSVWLRLVDTSLAFPGFFATESNPKVQQVPGL
SSYHVEAHTCVLFESKSALA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctccccgcgccgcccacgccgctcggctcctgcccccgcggccgcggcggc
ggaagagttgtagcgcggccccgtcgcgcgggtctcgcctgcgccgcgcggtcgtgctac
cgcttccggaccgacgacgacggcgtggtggacgtggccgtctccggggaggatggggac
ggcggcggcggggggtacgcggtgtccgtcgaggtccctggcactcgcgggcgggagggc
gggctagtgctccgcgcctcggggtccggcgagggcgtcccgctggcgccggccgccggc
ggcgcctccctcgcggccgagctctccttcgacccgacccgcgcgccgttctacctctcg
ttcctgctcacggacgcgtcgggggcggagatacggacgcaccgcaagacgagcttccgc
gtgcccgtcggcgtcgggccgggcagccccgcgccgctcggcatgtctatctcaggcgac
ggcgccgtcaatttcgcggtgtacagcaagaatgccaatgccgtttctctctacctctac
gccgccgccgtcggcggcggcggcggcgacgagcccgcgctggagatcgacctcgatccg
tacatccaccggactggcaacgtctggcatgtctctctggcgagcgtagatgggtacgtc
agctatgccttctgctgcggtggcatccgccgcccactgttggacccgtacgccaaggtg
atcggagacttcgtctccagcaactcggtttacgacgagggtgtcactgcgccgtcaatg
aggtgctttgcatcgttggcgattgcgccgagctacaactggggaagggacaggcacccc
cgtctgccattggagaagctggtggtgtaccgggcaaatgtggctttgttcacaaaggac
aggtcgagcgggctcccggatgacgctgccggcactttcaccgggctttctgctaaggta
gagcacttcaggagccttggtgtcaatgcaattttgctggaaccagtgttcccatttcat
caggtgaaaggaccttatttcccgtaccatttcttttcaccgatgaacttgtatagcagc
aaaggtttgagtgtttcagccatcaagtccatgaaggatatggtcagggtaatgcataga
aatggaatagaggtcctcttggaggtggtttttacacatactgctgagggagaatcagag
tgtcagacgatatcaatgcgtggcattgataattcctcgtattacattgccaatgggatc
gcaggatgcaaagcgagcatactgaattgcaaccatccggtgactcagaagctgattttg
gacagcctccgccattgggtgcttgacttccatgttgatgggttttgcttcatcaatgcc
cctttccttgtgagaggtcctggtggtgaatatttatctcgacctccccttcttgaggcg
ataacttttgacccggttctttccatgacaaagatcattgcagatccttggtctccactt
gacatatctaacgtgcaattcccattccctcattggaaaagatgggctgaggtgaacaca
agattctctattgatgtgcgcaaatttttgaagagagaagcacttattagtgatcttgct
acacgcctgtgcggcagtggggacctgttctcaaccagagggcctgcattttcattcaat
catgtatccaggaattcagggctttctcttgttgatctggtgagtttcagcaatgatgat
cttctttctgagtcgagctggaattgtggtgaagaaggtccatcagagaacagtgctgtc
cttcagacaaggctaaggcagatacgcaacttcttatttattctatttgtatcacttggt
gttcctgttctgaacatgggagatgaatgtgggcactctgctgctggttcagtatcatac
aaggatagagggcctctgaactggagaggcatgaagacaacatttgttaaggaagtgacc
ggattcatttcatttctaactgcactcaggagtcggcgaggcgatatctttcagagaagg
gaattcctaaaacttgagaatatacattggtatgggagcgatctatgtgagccaggttgg
gatgatcctaccagcaactttctttgcatgcacataaatgcagaggtagatgaaatggcg
gcagattcggtcagaggcgacctgtacatctgtttcaatgcaaacgaggaatcagtgagt
gctgccttgcctgctcttgcagaaggatccgtgtggttgcgcttggttgacacatcactt
gcatttccaggtttctttgcaaccgaatctaatcccaaggtgcaacaagtgccaggatta
tcctcttatcatgtggaagcgcatacttgtgttctatttgaatcaaagagcgctcttgcc
tag
Oryza sativa japonica (Japanese rice) (RefSeq): 4346068
Help
Entry
4346068 CDS
T01015
Name
(RefSeq) isoamylase 1, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00500
Starch and sucrose metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
4346068
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
4346068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
4346068
NCBI-ProteinID:
XP_015650242
UniProt:
D0TZF0
LinkDB
All DBs
Position
8:complement(25893656..25900723)
Genome browser
AA seq
803 aa
AA seq
DB search
MASLPHCLSARPLVVAAAPGRPGPGPGPWLRGGARRRNAAFSAGNAGRRVGLRRSVASAV
EVGVGEDEEEGVEEEEEEVEAVVMPERYALGGACRVLAGMPAPLGATALDGGVNFAVYSA
GASAASLCLFTPDDLEADEVTEEVPLDPLFNRTGNVWHVFIEGELHNMLYGYRFDGMFAP
HCGQYFDVSNVVVDPYAKAVISRGEYGVPGPGGDCWPQMAGMIPLPYSTFDWQGDLPLRY
PQKDLVIYEMHLRGFTKHSSSNVEHPGTYIGAISKLDYLKELGVNCVELMPCHEFNELEY
FSCSSKMNFWGYSTINFFSPMIRYSSGGIRNCGRDAINEFKTFVREAHKRGIEVIMDVVF
NHTAEGNEKGPILSFRGIDNSTYYMLAPKGEFYNYSGCGNTFNCNHPVVREFIVDCLRYW
VTEMHVDGFRFDLASIMTRGCSLWDPVNVYGSPVEGDMTTTGTPLATPPLIDMISNDPIL
GDVKLIAEAWDAGGLYQVGQFPHWKIWSEWNGKYRDIVRQFIKGTDGFAGGFAECLCGSP
HLYQAGGRKPWHSINFVCAHDGFTLADLVTYNKKYNSSNGEDNRDGENHNLSWNCGEEGE
FAGLSVKRLRKRQMRNFFVSLMVSQGVPMFYMGDEYGHTKGGNNNTYCHDHYVNYFRWDK
KEESSDLQRFCSLMTKFRKQCESLGLADFPTAQRLHWHGHQPGKPDWSETSRFVAFSTKD
ETKGEIYVAFNASHLPAVVGLPERPGYRWEPLVDTGKPAPYDFLTDDLPDRAHAVHLFSH
FLNSNLYPMLSYSSIILELQPDD
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctcccgcactgcctctccgcgcgcccgctcgtcgtcgcggcggccccgggg
cggcctgggccggggccggggccgtggctgcgcggcggggcgaggcggcggaatgcggcg
ttttcggcggggaacgcggggaggcgggtggggttgaggaggtcggtggcctcggcggtg
gaggtcggggtcggggaggatgaggaggagggtgtggaggaggaggaggaggaggtggag
gcggtggtgatgccggagaggtacgcgctgggtggcgcgtgcagggtgctcgccggaatg
cccgcgccgctcggggccaccgcgctcgacggcggggtcaatttcgccgtctactccgcc
ggcgcatccgccgcgtcgctctgcctcttcacccccgacgatctcgaggcggatgaggtg
actgaggaggttccgcttgatcctctgttcaatcggacggggaatgtgtggcacgtcttc
atcgaaggcgagctgcacaacatgctgtacgggtacaggttcgatggtatgttcgcccct
cactgcggccagtacttcgatgtctccaatgtcgtggtggatccttatgccaaggcagtg
ataagccgaggagagtatggtgtccccggtcctggtggcgattgctggcctcaaatggct
ggcatgatccctcttccgtacagtacgtttgattggcaaggtgacctacctctgagatat
cctcagaaggatcttgtaatctatgagatgcatttacgtgggtttacaaagcacagttca
agcaatgtagaacatccagggacttacattggggctatatcaaagcttgactatctgaag
gagcttggagttaactgtgtagagttgatgccctgccatgaattcaatgagctggagtac
ttcagctgctcttccaagatgaacttctggggatactccacgataaactttttttcacca
atgataagatattcatcaggtgggataagaaactgtggccgtgatgccataaatgaattc
aaaacttttgttagagaggctcacaaacggggaattgaggtgatcatggatgttgtcttc
aatcatacagccgagggtaatgagaaaggaccaatattatcatttagggggatagataat
agcacatactatatgcttgcccctaagggagagttttacaattattctggttgtgggaat
accttcaactgtaatcatcctgtggtccgtgaatttattgtagattgtttaagatactgg
gtgacagaaatgcatgttgatggttttcgttttgatcttgcatccataatgaccagagga
tgcagtctttgggatccagttaatgtgtatggaagtccagtagaaggtgacatgactacg
acagggacacctcttgctactccaccacttattgacatgatcagcaatgatccaattctt
ggagatgtcaagctcattgctgaagcatgggatgcgggaggcctctatcaagtaggtcaa
tttcctcactggaaaatttggtcagaatggaatggaaagtaccgggacattgttcgtcaa
ttcattaaaggcacagatggatttgctggtggtttcgctgaatgtttgtgtggaagtcca
catctataccaggcaggggggaggaaaccttggcacagtatcaactttgtgtgtgcgcat
gatggatttacgctggctgatttggtgacatataacaagaagtacaactcttcaaatggt
gaggataatagagatggagaaaatcataacctcagctggaactgtggggaggaaggagaa
tttgcaggtttgtcggtcaaaagattgaggaagaggcaaatgcgcaatttctttgtttct
ctcatggtttctcaaggtgttccgatgttctacatgggcgatgaatatggccatacaaaa
ggaggcaacaacaacacatactgccatgaccattatgtcaattatttccgctgggacaag
aaagaagaatcctctgacttgcaacggttctgctctcttatgaccaaattccgcaaacaa
tgcgagtcccttggcctcgcagacttcccaacagctcaacggttgcattggcatggccat
cagcctgggaaacctgactggtctgagacaagccgtttcgtggccttctccacgaaagat
gaaacgaaaggcgagatctacgtggccttcaacgccagccatttgccggcggttgttgga
ctcccagagcgcccaggctaccgctgggagccgctggtggacacaggcaagccagcgcct
tatgacttcctcaccgacgacctgcctgatcgtgctcacgccgtccacctgttctctcat
ttcctcaactccaatctctaccccatgctcagctactcctccatcatccttgaattgcag
cctgatgattga
Oryza sativa japonica (Japanese rice) (RefSeq): 4347328
Help
Entry
4347328 CDS
T01015
Name
(RefSeq) isoamylase 3, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00500
Starch and sucrose metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
4347328
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
4347328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
DUF5696
GHL10
Motif
Other DBs
NCBI-GeneID:
4347328
NCBI-ProteinID:
XP_015612255
UniProt:
B9G434
LinkDB
All DBs
Position
9:complement(17857338..17868663)
Genome browser
AA seq
782 aa
AA seq
DB search
MDSIGINRAPLGSSSSAAAVTARRGIALRPARRSVASTNRVGVATIGFGDASGLRACSEK
VRRFDSVRSTTARAQNGNAGRSMTEERGCTMSDTEMPFKYSSGKAFPLGVSQVEGGLNFA
LFSQHASSVILCLKLPGRGTEDEKGADVVEFVLDQQKNKTGDIWHVIVEGLPASGVLYGY
RVGGPQGWDQGHRFDSSTVLLDPYAKLVSGRKYFGVAEEKSSQHFGTYDFDSSPFDWGDD
YRLPNLPEADLVIYEMNVRAFTADESSGLDSTSRGSYLGLIDKIPHLLELGVNAVELLPV
FEYDELEFKRYPNPRDHMVNTWGYSTINFFAPMSRYASAGGGPVAASKELKQMVKELHKA
GIEVILDVVYNHTNEADDAHPYMTSFRGIDNKVYYMLDLNKNAELLNFSGCGNTLNCNHP
VVKELILDSLRHWVEEYHIDGFRFDLASVLCRGPDGCPLDAPPLIKEIAKDAVLSRCKII
AEPWDCGGLYLVGRFPNWDRWAEWNGKYRDDLRRFIKGDPGMKGVFATRVSGSADLYQVN
ERKPYHGVNFVIAHDGFTLCDLVSYNLKHNDANGEGGCDGCNDNFSWNCGVEGETNDLNV
LSLRSRQMKNFHVALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTCINNFQWEQLEQRRD
GHFRFFSEMIKFRHSNPILRRDRFLNKNDVTWHEDCWENQESKFLAFTVHDHNSGGDIYL
AFNAHDYFVDAVIPPPPHHKCWNRVVDTNLESPNDIVPEGVPFTGPKYRIAPYSSILLKA
KP
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggattccattggtataaatcgcgccccgctgggttcctcctcctccgccgccgccgtg
acagctcgtcgaggcatcgcgctccgcccggctcgccgctccgtcgcgagtacgaaccgt
gtgggtgtggcgacgatcggcttcggggacgcgtctgggctcagagcgtgttctgagaag
gttaggcgatttgattctgtacgaagcaccacggcgagagctcagaacgggaacgctggg
agaagcatgaccgaggaaagaggatgtacaatgtctgatactgaaatgccatttaaatat
tcctctggtaaagccttcccattaggagtgtctcaagttgaaggcgggctgaacttcgca
cttttctctcagcatgcttcttctgtcattctctgcttaaagcttcctgggaggggaact
gaagatgagaaaggtgcagatgttgtcgagtttgttttagaccagcagaagaacaaaact
ggggatatatggcatgtgatagtggagggcttgcctgcttctggtgttctttatgggtat
cgtgttggtggccctcaaggatgggaccaaggccatagatttgatagcagcactgttctt
ctggacccttatgcaaaattagtttctggtcgaaagtactttggggttgctgaagagaag
tcaagccagcattttggaacatatgattttgatagctctccttttgattggggtgatgac
tacaggcttccgaatttgcctgaggcagatctagtcatatatgaaatgaacgtccgtgct
ttcaccgcggatgagtcaagtggccttgattcgacttctcgtggaagctatcttggtctc
attgataaaatccctcatttgctggaacttggcgttaatgcagtggaactacttcctgtt
tttgagtatgatgagctggaattcaagaggtaccccaacccaagggaccacatggtcaat
acatggggctattctacgataaacttttttgcacccatgagccgttatgctagtgccggt
ggtggaccagtggctgcttccaaagagctcaagcagatggtcaaagaattgcataaagct
ggcatagaggttattctggatgttgtttacaaccatacaaatgaggcggatgatgctcac
ccgtatatgacttctttccgtggcattgataacaaggtctattacatgttagacctgaac
aaaaatgctgaactactgaacttctcaggctgcgggaatacactgaactgcaaccatcct
gttgtcaaggagctcattcttgacagcttgagacactgggttgaggagtatcacatagat
ggatttcgatttgaccttgcaagtgttctttgtcgtggaccagatggttgtcctcttgat
gcacctccactcatcaaggaaattgccaaagatgctgtattatctagatgtaagatcatt
gctgaaccttgggattgcggcggcctttatctcgtagggcgtttccctaactgggacagg
tgggctgaatggaacggcaaatacagagatgatcttcgaagatttattaagggtgaccct
ggtatgaagggggtgtttgcgactcgtgtgtctggatctgctgatctctatcaggtgaac
gagcggaagccttaccatggtgtaaattttgtgattgcacatgatggatttactttatgt
gaccttgtttcttacaacttaaagcacaatgatgctaatggagaaggtggctgtgatgga
tgcaatgacaactttagctggaactgtggtgttgaaggagaaacaaatgatctgaatgtg
ttaagtctgcgttcaagacaaatgaaaaacttccatgtagctttaatgatttctcagggc
accccaatgatgttgatgggcgatgaatatggtcatacacgttatgggaacaacaatagc
tatggacatgatacttgcattaataatttccaatgggaacagttggaacaaagaagagat
ggccatttcaggtttttctcagagatgataaagtttcgtcacagcaacccaatattaaga
cgagacaggtttcttaataaaaacgatgtcacctggcacgaggattgttgggagaaccag
gaaagcaaatttttggcattcacagtacatgatcacaactctggtggagatatctatttg
gcattcaatgcacatgactattttgtggacgctgtaattcccccaccaccacaccataaa
tgttggaaccgtgtggtggataccaacctggaatcaccaaatgatattgtaccagaaggg
gtgccatttacaggaccaaaatacagaattgctccatactcttccattctgctcaaggca
aagccttag
DBGET
integrated database retrieval system
