Oryza sativa japonica (Japanese rice) (RefSeq): 4338791
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Entry
4338791 CDS
T01015
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase I
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00900
Terpenoid backbone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
osa_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
osa_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
4338791
Enzymes [BR:
osa01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
4338791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
4338791
NCBI-ProteinID:
XP_015637711
UniProt:
Q6AUB0
A0A0N7KKS3
LinkDB
All DBs
Position
5:20210317..20213582
Genome browser
AA seq
293 aa
AA seq
DB search
MAAAARSLALLSTASASLGLGVARSSARPRSPFGRGLALRGLSSSSSSFAATAAVMGKAG
TAEAADAGMDAVQQRLMFEDECILVDEQDNVIGHDSKYNCHLMEKINSGHVLHRAFSVFL
FNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEDKSLGVRNAAQRKLFDELGI
QAEELPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFMVRDVELSPNPEEVADVKYVNRDE
LKELLKKADAGEGGIKLSPWFRLVVDNFLMRWWDHVEQGTLEEAIDMKTIHKL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgcgctccctcgcgctgctctcgaccgcctccgcgtccctcggcctc
ggcgtcgcgcgctcctccgcccgccctcggtccccgtttgggcggggcctcgccctccgc
ggcctgtcgtcgtcctcgtcctccttcgccgccaccgccgcggtgatggggaaggccggc
accgcggaagccgccgacgccgggatggacgccgtccagcagcggctcatgttcgaggac
gagtgtattttagtggacgaacaggacaacgtcattggccatgattccaagtataactgc
catctcatggaaaagataaattctggtcatgtcctccacagagcgttcagtgtttttctt
ttcaactccaaatatgaattgttacttcagcaaaggtctgctacaaaagtgacatttcca
cttgtctggacaaacacttgctgtagccaccctctataccgcgagtccgagctcattgaa
gataaaagcctaggggtcagaaatgcagcacagcggaagctattcgatgaactgggaata
caagctgaagaactacctgttgaccaattcattcctcttgggaggatgctttacaaggct
ccatctgatggaaaatggggcgaacatgaactggactacctcctattcatggttcgtgat
gtggagctcagcccgaatcctgaagaagtggccgacgtcaagtacgtgaatcgtgatgag
ctgaaggagttgctcaagaaggcagatgctggtgaaggcggcattaagctgtccccttgg
tttaggctggttgttgacaacttcctcatgagatggtgggatcatgttgagcaagggact
ctggaggaggccatcgacatgaaaacaattcataagttgtag
Oryza sativa japonica (Japanese rice) (RefSeq): 4343523
Help
Entry
4343523 CDS
T01015
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase I
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00900
Terpenoid backbone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
osa_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
osa_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
4343523
Enzymes [BR:
osa01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
4343523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
4343523
NCBI-ProteinID:
XP_015646798
UniProt:
A0A0P0X7B7
Q8GVZ0
LinkDB
All DBs
Position
7:21625606..21628798
Genome browser
AA seq
238 aa
AA seq
DB search
MAGAAAAVEDAGMDEVQKRLMFDDECILVDEQDNVVGHESKYNCHLMEKIESENLLHRAF
SVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIQENYLGVRNAAQRKLLD
ELGIPAEDVPVDQFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVVPNPDEVADVKYV
SREQLKELIRKADAGEEGLKLSPWFRLVVDNFLMGWWDHVEKGTLNEAVDMETIHKLK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgccgccgccgccgtggaggacgccgggatggacgaggtccagaagcggctc
atgttcgacgacgaatgcattttggtggatgaacaagacaatgttgttggccatgaatca
aaatataactgccatctgatggaaaaaatcgaatctgaaaatctacttcatagggctttc
agtgtattcctgttcaactcaaaatatgaactcctactccagcaacgatctgcaacaaag
gttacatttcctctagtttggaccaacacttgctgcagccatcctctgtaccgtgagtct
gagcttatacaggaaaactaccttggtgttagaaatgctgctcagaggaagctcttggat
gagctgggcatcccagctgaagatgtgccagttgaccaattcacccctcttggtcggatg
ctttacaaggccccatctgatggaaaatggggtgaacacgagcttgactacctgctgttc
atcgtccgcgacgtgaaggtagtcccgaacccggacgaagtggccgatgtgaaatacgtg
agccgtgagcagctgaaggagctcatccgcaaagcggacgccggagaggaaggcctgaag
ctgtctccctggttccggctggttgttgacaacttcctcatgggctggtgggatcacgtc
gagaaaggcaccctcaacgaggccgtggacatggagaccatccacaagctgaagtaa
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integrated database retrieval system