Oryza sativa japonica (Japanese rice): 4340093
Help
Entry
4340093 CDS
T01015
Name
(RefSeq) palmitoyl-acyl carrier protein thioesterase, chloroplastic
KO
K10781
fatty acyl-ACP thioesterase B [EC:
3.1.2.14
3.1.2.21
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00061
Fatty acid biosynthesis
osa01100
Metabolic pathways
osa01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
4340093
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
osa01004
]
4340093
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.2 Thioester hydrolases
3.1.2.14 oleoyl-[acyl-carrier-protein] hydrolase
4340093
3.1.2.21 dodecanoyl-[acyl-carrier-protein] hydrolase
4340093
Lipid biosynthesis proteins [BR:
osa01004
]
Fatty acid synthase
Component type
4340093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Acyl-thio_N
Acyl-ACP_TE
Acyl-ACP_TE_C
4HBT_2
Motif
Other DBs
NCBI-GeneID:
4340093
NCBI-ProteinID:
XP_015644420
UniProt:
A3B8B2
Q9SNP5
LinkDB
All DBs
Position
6:join(2433462..2433974,2434075..2434208,2435448..2435561,2435666..2435852,2435946..2436014,2436190..2436456)
Genome browser
AA seq
427 aa
AA seq
DB search
MAGSLAASAFFPVPGSSPAASARSSKNTTGELPENLSVRGIVAKPNPSPGAMQVKAQAQA
LPKVNGTKVNLKTTSPDKEDIIPYTAPKTFYNQLPDWSMLLAAVTTIFLAAEKQWTLLDW
KPKKPDMLADTFGFGRIIQDGLVFRQNFLIRSYEIGADRTASIETLMNHLQETALNHVKT
AGLLGDGFGATPEMSKRNLIWVVSKIQLLVERYPSWGDMVQVDTWVAAAGKNGMRRDWHV
RDYNSGQTILRATSVWVMMNKNTRRLSKMPDEVRAEIGPYFNGRSAISEEQGEKLPKPGT
TFDGAATKQFTRKGLTPKWSDLDVNQHVNNVKYIGWILESAPISILEKHELASMTLDYRK
ECGRDSVLQSLTAVSGECDDGNTESSIQCDHLLQLESGADIVKAHTEWRPKRAQGEGNMG
FFPAESA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctggttctcttgcggcgtctgcattcttccctgtcccagggtcttcccctgcagct
tcggctagaagctctaagaacacaaccggtgaattgccagagaatttgagtgtccgcgga
atcgtcgcgaagcctaatccgtctccaggggccatgcaagtcaaggcgcaggcgcaagcc
cttcctaaggttaatggaaccaaggttaacctgaagactacaagcccagacaaggaggat
ataataccgtacactgctccgaagacattctataaccaattgccagactggagcatgctt
cttgcagctgtcacgaccattttcctggcagctgagaagcagtggactctgcttgactgg
aagccgaagaagcctgacatgctggctgacacattcggctttggtaggatcatccaagac
gggctggtgtttaggcaaaacttcttgattcggtcctacgagattggtgctgatcgtaca
gcttctattgagacattaatgaatcatttacaggaaacagctctgaaccatgtgaaaact
gctggtctcttaggtgatggttttggtgctacgccggagatgagcaaacggaacttaata
tgggttgtcagcaaaattcagcttcttgttgagcgatacccatcatggggagatatggtc
caagttgacacatgggtagctgctgctggcaaaaatggcatgcgtcgagattggcatgtt
cgggactacaactctggtcaaacaatcttgagggctacaagtgtttgggtgatgatgaat
aagaacactagaagactttcaaaaatgccagatgaagttagagctgaaataggcccgtat
ttcaatggccgttctgctatatcagaggagcagggtgaaaagttgcctaagccagggacc
acatttgatggcgctgctaccaaacaattcacaagaaaagggcttactccgaagtggagt
gaccttgatgtcaaccagcatgtgaacaatgtgaagtatattggttggatacttgagagt
gctccaatttcgatactggagaagcacgagcttgcaagcatgaccttggattacaggaag
gagtgtggccgtgacagtgtgcttcagtcgcttaccgctgtttcaggtgaatgcgatgat
ggcaacacagaatcctccatccagtgtgaccatctgcttcagctggagtccggagcagac
attgtgaaggctcacacagagtggcgaccgaagcgagctcagggcgaggggaacatgggc
tttttcccagctgagagtgcatga
Oryza sativa japonica (Japanese rice): 4341431
Help
Entry
4341431 CDS
T01015
Name
(RefSeq) palmitoyl-acyl carrier protein thioesterase, chloroplastic
KO
K10781
fatty acyl-ACP thioesterase B [EC:
3.1.2.14
3.1.2.21
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00061
Fatty acid biosynthesis
osa01100
Metabolic pathways
osa01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
4341431
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
osa01004
]
4341431
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.2 Thioester hydrolases
3.1.2.14 oleoyl-[acyl-carrier-protein] hydrolase
4341431
3.1.2.21 dodecanoyl-[acyl-carrier-protein] hydrolase
4341431
Lipid biosynthesis proteins [BR:
osa01004
]
Fatty acid synthase
Component type
4341431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Acyl-thio_N
Acyl-ACP_TE
Acyl-ACP_TE_C
4HBT_2
Motif
Other DBs
NCBI-GeneID:
4341431
NCBI-ProteinID:
XP_015644302
UniProt:
A3BD96
LinkDB
All DBs
Position
6:join(24319625..24320137,24320218..24320351,24320846..24320959,24321157..24321340,24321440..24321508,24322547..24322804)
Genome browser
AA seq
423 aa
AA seq
DB search
MAGSIAASAFLPGSPAAAPPKSVLGERPDSLDVRGIAAKPGSSSSAAALRAGKTRTHAAI
PKVNGGSSALADPEHDTMSSSSSSAAPRTFYNQLPDWSMLLAAITTIFLAAEKQWTLLDW
KPKRPDMLTDTFGFGRMIHEGLMFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKS
AGLLGDGFGSTPEMSKRDLFWVVSQMQAIVERYPCWGDTVEVDTWVGAHGKNGMRRDWHI
RDSVTGHTILKATSKWVMMHKLTRRLARIPDEVRTEIEPYFFEHASIVDEDNQKLPKLPD
IEGANVAKYVRTGLTPRWADLDINQHVNNVKYIGWILESAPISILEKHELASIVLDYKRE
CGRDSVLQSHTTVYTDCNKHSGQTTLHCEHLLSLESGPTIVKARTMWRPKGTRPQESIIP
SSS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccggctcaatcgccgcctcggcgttcttgccggggtcgccggcggccgcgccgccc
aagagcgtcctgggcgagcgcccggacagcctggacgtccgcggcatcgccgcgaagccg
ggctcctcgtcgtcggccgccgccctgagggccggcaagacgcgcacccacgccgccatc
cccaaggtgaacggcggcagttcggcgctggcggatccggagcacgacacgatgtcctcc
tcctcctcctccgcggcgccgaggacgttctacaaccagctccccgactggagcatgctc
ctcgcagccatcacgaccatcttcttggccgcggagaagcagtggacgctgctggactgg
aagccgaagcggcccgacatgctcaccgacacgttcggtttcggcaggatgatacatgag
gggctcatgttcaggcagaacttctcgattaggtcctatgagatcggggccgataggacg
gcgtctatagaaacgctgatgaaccatttgcaggaaaccgcactgaatcatgtgaagagc
gctgggctgctaggagatggttttggctcaacgccagagatgagtaaacgagacttgttc
tgggttgtcagccaaatgcaggcaatcgttgagcgttatccgtgctggggtgatactgtc
gaagtagatacatgggttggtgctcatggtaaaaatggaatgcgcagagactggcatata
cgtgattctgtaacaggccatacaatattgaaggctacaagtaaatgggttatgatgcac
aagcttacaaggaggctagcaagaattcctgatgaagtacgtactgaaatagagccatac
ttttttgagcatgcttctattgtagatgaagacaaccagaaacttccaaaactgccagat
attgaaggtgctaatgtagccaaatatgtccggacaggcctgactccacgatgggccgac
cttgatatcaatcagcatgttaataacgttaaatacatagggtggatcctagagagcgca
ccaatctccattctggagaaacatgagctggcaagtattgtcctggattacaagagggag
tgtggccgagacagcgtgctgcaatcacacactaccgtgtacactgactgcaacaagcac
tctggacaaaccactttgcactgtgagcatttgctgagcctggaatcaggacctaccatc
gtcaaggccaggaccatgtggaggccaaaaggaaccaggccccaagagagtatcattccg
tcttcgtcgtga
Oryza sativa japonica (Japanese rice): 4351056
Help
Entry
4351056 CDS
T01015
Name
(RefSeq) palmitoyl-acyl carrier protein thioesterase, chloroplastic
KO
K10781
fatty acyl-ACP thioesterase B [EC:
3.1.2.14
3.1.2.21
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00061
Fatty acid biosynthesis
osa01100
Metabolic pathways
osa01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
4351056
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
osa01004
]
4351056
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.2 Thioester hydrolases
3.1.2.14 oleoyl-[acyl-carrier-protein] hydrolase
4351056
3.1.2.21 dodecanoyl-[acyl-carrier-protein] hydrolase
4351056
Lipid biosynthesis proteins [BR:
osa01004
]
Fatty acid synthase
Component type
4351056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Acyl-thio_N
Acyl-ACP_TE
Acyl-ACP_TE_C
4HBT_2
Motif
Other DBs
NCBI-GeneID:
4351056
NCBI-ProteinID:
XP_015617879
UniProt:
A3CDM0
Q2R045
LinkDB
All DBs
Position
11:complement(join(28429976..28430230,28430454..28430522,28430664..28430850,28430988..28431101,28432994..28433127,28433231..28433749))
Genome browser
AA seq
425 aa
AA seq
DB search
MAGSLAASAFFPGPGSSPAASARSSKNAAVTGELPENLSVRGIVAKPNPPPAAMQVKAQA
QTLPKVNGTKVNLKTVKPDMEETVPYSAPKTFYNQLPDWSMLLAAITTIFLAAEKQWTLL
DWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGADRTASIETLMNHLQETALNHV
RTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDW
HVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVRAEIGPYFNDRSAITEEQSEKLAKT
GNKVGDDATEQFIRKGLTPRWGDLDVNQHVNNVKYIGWILESAPISVLEKHELASMTLDY
RKECGRDSVLQSLTTVSGECTSIGADKQASAIQCDHLLQLESGADIVKAHTEWRPKRSHA
AAENA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtctcttgccgcctcagcattcttcccaggtccaggctcatctcctgcagca
tcagctagaagctccaagaatgctgctgttaccggcgaattgccggagaatttgagtgtc
cgtggcattgtcgcaaagcctaacccacctcctgcagccatgcaagtaaaggcacaggct
caaacccttcccaaggttaatggtacgaaggttaacctcaagacggtgaagcctgacatg
gaggaaacggtgccttacagtgctccaaagacgttctataaccaactgccggattggagc
atgcttcttgcggctattacaaccatcttccttgccgcagagaagcagtggacactgctt
gattggaagccaaagaaacctgacatgcttgttgacacatttggctttggtaggattatc
caggacggtatggtgtttaggcagaacttcatgattcggtcctacgagattggtgctgat
cgtacagcttctatagagacattgatgaatcatttacaggaaacagctcttaaccatgtg
aggactgctggtcttcttggagatggttttggggctacaccggagatgagcaaacggaac
ttgatatgggttgtcagcaaaatccagcttcttgttgagcaataccccgcatggggagat
acggttcaagttgacacatgggttgctgctgctggcaaaaatggcatgcgtcgagactgg
catgttcgtgactacaactctggccgaacaatcttgagagctacaagtgtttgggtgatg
atgcacaagaaaactagaagactttcaaaaatgccagatgaagttagagctgaaataggc
ccatatttcaatgaccgttcagctataacagaggagcagagtgaaaagttagccaagaca
ggaaataaagttggtgatgatgctacagagcaattcataagaaaggggctcactcctaga
tggggtgacctcgatgtcaatcagcatgtgaacaatgttaaatatattgggtggatcctt
gagagtgctccaatttcagtactggagaagcatgagcttgcaagcatgaccctggattac
aggaaggagtgtggtcgagacagcgtgctgcaatcacttaccaccgtgtcaggggaatgc
accagcattggcgccgacaagcaggcttctgccatccagtgcgaccatcttcttcagctt
gagtcaggagctgatattgtgaaggcacacacagagtggcgaccaaagcgatcgcacgca
gcagctgagaacgcgtaa
DBGET
integrated database retrieval system