KEGG   Oryza sativa japonica (Japanese rice): 4340610
Entry
4340610           CDS       T01015                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    4340610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:osa03400]
    4340610
Enzymes [BR:osa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     4340610
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     4340610
 Prokaryotic type
     4340610
SSDB
Motif
Pfam: HhH-GPD zf-Vps39_C USP47_C
Other DBs
NCBI-GeneID: 4340610
NCBI-ProteinID: XP_015641912
UniProt: Q67VC2
LinkDB
Position
6:complement(join(7338848..7339090,7339181..7339237,7339990..7340193,7340271..7340600))
AA seq 277 aa
MTRKPKRKPPPSPEPYHDHPSPSPAQCLAVRDALLAFHGFPDEFAPFRRRRRRLGLDTSP
DPEEDTDGDPSPPPTVLDGLVTTLLSQNTTDAISRRAFAALKAAFPTWDQVVDEEEGKRL
EDAIRCGGLAATKAARIRAMLRGVRERRGKICLEYLRDLSVDEVKTELSRFKGIGPKTVA
CVLMFYLQKDDFPVDTHVLRITNAIGWVPATASRERAYLHLNSKIPDDLKFDLNCLFVTH
GKLCQSCSKKLGGQKTTGSNSMCPLASYCCTEEKMKQ
NT seq 834 nt   +upstreamnt  +downstreamnt
atgacccggaagcccaagcggaagcctccgccctcgccggagccgtaccacgaccacccc
tccccttcccccgcccaatgcctcgccgtccgcgacgccctcctcgccttccacggcttc
cccgacgagttcgcgcccttccgccgccgccgccgccgcctcggcctcgacacatccccg
gacccggaggaggacacggatggcgatccgtctccgccgcccaccgtcctcgacggcctc
gtcacgaccctcctctctcagaacaccaccgacgccatctcgcgccgcgccttcgccgcc
ctcaaggccgcgttccccacctgggaccaggtggtggatgaggaggaggggaagaggctg
gaggacgccatccggtgcggggggcttgcggcgacgaaggcggcgaggataagggcgatg
ctgaggggcgtccgggagaggcgaggcaagatttgcctcgagtatttgcgggatctgtcc
gtggatgaggtgaagactgagctatctcggttcaaagggatcgggccaaagactgtggcg
tgtgtgctgatgttctatcttcagaaggatgattttccagtagatactcatgtactccgt
attacaaacgctattggttgggttcctgcaacagctagcagagagagggcatatcttcat
ctgaacagcaaaattcctgatgatctaaaatttgatctgaattgtctatttgtaactcat
ggaaagctctgtcaatcatgttccaaaaagttaggaggccagaaaaccaccggttcaaat
tctatgtgccccctagcaagttattgttgcactgaagaaaagatgaagcaatag

KEGG   Oryza sativa japonica (Japanese rice): 9268162
Entry
9268162           CDS       T01015                                 
Name
(RefSeq) endonuclease III homolog 1, chloroplastic isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    9268162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:osa03400]
    9268162
Enzymes [BR:osa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     9268162
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     9268162
 Prokaryotic type
     9268162
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S Ogg-HhH
Other DBs
NCBI-GeneID: 9268162
NCBI-ProteinID: XP_015617926
UniProt: Q2R7H4
LinkDB
Position
11:join(9658880..9659000,9660199..9660326,9660690..9660747,9660848..9660889,9661471..9661589,9661980..9662046,9662409..9662500,9662819..9662956,9663035..9663139,9663243..9663326,9663492..9663626)
AA seq 362 aa
MPLALLARAALSSTSSSIAMATTRSSSSRVLRASRAELNPGAKEVKRESSVSFDLTKTEA
VASMRSKNVKRVLEVTGENIKKEVDIVPDIEDFRYGKASPSLVRLEKKVRVSSAIKVGAP
ENWEAILKGIKNMRLSGEAPVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAA
VERLSEKGLLDPDAIVRTDEATLANLIKPVGFYQRKAKFIKEASKICLERFGGDIPDSLN
ELLALKGVGPKMAHLVMSIAWKNTQGICVDTHVHRISNRLGWVFREGTKQKTTTPEQTRM
SLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCDMCGINNICPSAFKESSSPNPKQKKMR
SS
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcccctcgctctcctcgcccgcgccgctctctcctccacctcctcctccatcgccatg
gccaccacgcgctcctcctcctccagggtgcttcgtgcctcccgtgcggagctcaaccca
ggtgctaaagaagtgaaacgtgaatccagtgtttcttttgacttgaccaaaactgaagcg
gttgcttccatgagaagcaaaaatgtgaaacgggtgcttgaagtaactggggaaaatatt
aagaaagaggttgatatcgttcctgacattgaagattttcgatatggcaaggcatcgcca
tctttagttaggttggagaaaaaggtgagagtttcatctgctataaaagttggagctcca
gaaaattgggaggcaatccttaagggtattaaaaacatgaggttatctggcgaggcccct
gtagatacaaagggctgtgaaaaagctggttctcttcttccacccaaggaaaggagattc
gcagttttgatatcaaccatgatgtcaagccaaacaaaagatgaagttacacatgctgct
gttgaacgtctatctgagaaaggtttacttgatccggatgctattgtccgaacagatgag
gccacactagcgaatcttatcaaacctgttggattctatcagaggaaggccaaattcata
aaagaagcttctaaaatttgccttgaacgttttggaggggatattccagattctctgaat
gagcttcttgctctgaaaggagttggtcctaaaatggctcatctggtgatgagcattgca
tggaagaatactcagggaatttgcgttgacactcatgtacatcgcatatctaaccgtctt
gggtgggttttccgagagggaacaaaacagaaaactacaacacccgagcaaacaagaatg
tctcttgagaagtggctaccaaaggatgagtgggaacctatcaacccattactggttgga
tttgggcaaacaatctgtactccacttaggcccaaatgtgacatgtgcggcataaacaac
atctgcccttcagctttcaaggaatcatcaagcccaaatccaaagcaaaagaaaatgagg
tcatcttag

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