KEGG   Oryza sativa japonica (Japanese rice): 4341638
Entry
4341638           CDS       T01015                                 
Symbol
CHMP1, OsJ_22129
Name
(RefSeq) eSCRT-related protein CHMP1
  KO
K12197  charged multivesicular body protein 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03272  Virion - Hepatitis viruses
osa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    4341638 (CHMP1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4341638 (CHMP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4341638 (CHMP1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4341638 (CHMP1)
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    4341638 (CHMP1)
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4341638 (CHMP1)
  Exosomal proteins of other body fluids (saliva and urine)
   4341638 (CHMP1)
  Exosomal proteins of colorectal cancer cells
   4341638 (CHMP1)
SSDB
Motif
Pfam: Snf7 Ist1 DUF5798 CRCB
Other DBs
NCBI-GeneID: 4341638
NCBI-ProteinID: NP_001389825
LinkDB
Position
6:27079527..27080144
AA seq 205 aa
MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR
KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDN
FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP
AAKEKEKAVDEDDLSRRLAELKARG
NT seq 618 nt   +upstreamnt  +downstreamnt
atggggaacccggagaagctgatgacccagatcttcgacctcaagttcacctccaagtcg
ctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagctcaaggtgaag
aaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgagaacgccatccgc
aagcgcaccgagcacatgaactacctccgcctcgcctcccgcctcgacgccgtcgtcgcg
cgcctcgacacccaggcgaagatgcaggtcatcggcaagtccatggccaacatcgtcaag
tcgctcgactccgcgctcgccacggggaacctgcagaagatgtccgagaccatggacaac
ttcgagcgccagttcgtcaacatggaggtccaggccgagttcatggagggcgccatggcc
ggctccacctcgctctccacgcccgagaccgaggtcaacagcctcatgcagcaagtcgcc
gacgactacggccttgaggtctccgttgggttgccgcaggccgccgctcacgccatacca
gctgccaaggagaaggagaaggctgttgatgaagacgacctctcccgccgcctggctgag
cttaaggcccgcggctga

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