Oryza sativa japonica (Japanese rice): 4341638
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Entry
4341638 CDS
T01015
Symbol
CHMP1, OsJ_22129
Name
(RefSeq) eSCRT-related protein CHMP1
KO
K12197
charged multivesicular body protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03272
Virion - Hepatitis viruses
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
4341638 (CHMP1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4341638 (CHMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4341638 (CHMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4341638 (CHMP1)
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
4341638 (CHMP1)
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4341638 (CHMP1)
Exosomal proteins of other body fluids (saliva and urine)
4341638 (CHMP1)
Exosomal proteins of colorectal cancer cells
4341638 (CHMP1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Ist1
DUF5798
CRCB
Motif
Other DBs
NCBI-GeneID:
4341638
NCBI-ProteinID:
NP_001389825
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All DBs
Position
6:27079527..27080144
Genome browser
AA seq
205 aa
AA seq
DB search
MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR
KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDN
FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP
AAKEKEKAVDEDDLSRRLAELKARG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggggaacccggagaagctgatgacccagatcttcgacctcaagttcacctccaagtcg
ctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagctcaaggtgaag
aaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgagaacgccatccgc
aagcgcaccgagcacatgaactacctccgcctcgcctcccgcctcgacgccgtcgtcgcg
cgcctcgacacccaggcgaagatgcaggtcatcggcaagtccatggccaacatcgtcaag
tcgctcgactccgcgctcgccacggggaacctgcagaagatgtccgagaccatggacaac
ttcgagcgccagttcgtcaacatggaggtccaggccgagttcatggagggcgccatggcc
ggctccacctcgctctccacgcccgagaccgaggtcaacagcctcatgcagcaagtcgcc
gacgactacggccttgaggtctccgttgggttgccgcaggccgccgctcacgccatacca
gctgccaaggagaaggagaaggctgttgatgaagacgacctctcccgccgcctggctgag
cttaaggcccgcggctga
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