Oryza sativa japonica (Japanese rice) (RefSeq): 4341663
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Entry
4341663 CDS
T01015
Name
(RefSeq) homogentisate geranylgeranyltransferase, chloroplastic
KO
K09833
homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:
2.5.1.115
2.5.1.116
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00130
Ubiquinone and other terpenoid-quinone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01240
Biosynthesis of cofactors
Module
osa_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
4341663
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
osa01006
]
4341663
Enzymes [BR:
osa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.115 homogentisate phytyltransferase
4341663
2.5.1.116 homogentisate geranylgeranyltransferase
4341663
Prenyltransferases [BR:
osa01006
]
Compound prenylation
HGA prenyltransferase
4341663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
4341663
NCBI-ProteinID:
XP_015641999
UniProt:
Q0DAK7
LinkDB
All DBs
Position
6:complement(26435189..26439393)
Genome browser
AA seq
404 aa
AA seq
DB search
MQASSAAAAAACSAIKPAAHQHTVQVQEDKRGSEFRARFGTRKLSWGGKLSVENSALHQC
QSLTRSIRRQKRQHSPVLQVRCYAIAGDQHESIATEFEEICKEVPQKLGAFYRFCRPHTI
FGTIIGITSVSLLPMRSLDDFTMKALWGFLEALSSSLCMNIYVVGLNQLYDIQIDKVNKP
SLPLASGEFSVATGAVLVLTSLIMSIAIGIRSKSAPLLCALFISFFLGSAYSVDAPLLRW
KRNAFLAASCILFVRAVLVQLAFFAHMQQHVLKRPLAPTKSVVFATLFMCCFSSVIALFK
DIPDIDGDRHFGVESLSVRLGPERVYWLCINILLTAYGAAILAGASSTNLCQMIITVFGH
GLLAFALWQRAQHCDVENKAWITSFYMFIWKLFYAEYFLIPFVQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctcatcggcggcggcggcggcggcgtgctcggctatcaagccggcggcgcat
cagcacaccgtgcaagtccaggaagataagaggggatcggaattcagggctcggtttgga
acgaggaaactgtcctggggaggtaaattgtcggtggaaaattctgctctacaccagtgt
caaagtctcacaagaagcataaggaggcaaaaaagacaacattctccagtcctccaagtg
agatgctatgccattgctggtgatcagcacgaatccatcgccactgagtttgaagaaatt
tgcaaagaagttccccagaaactgggagctttttatcggttttgccgaccccacacaatt
tttggcactataataggaatcacttcagtttctctcctgccaatgaggagcctagatgat
tttactatgaaagcattatggggatttcttgaggctttatcctcttctttatgtatgaat
atctatgttgtaggcctgaatcaactatatgacatccagattgataaggtcaataagccc
agccttccgttggcgtcaggagaattttcagtggcaactggagcagtgttagtactcacg
tccttgatcatgagcattgccattggaatcagatccaaatcagctcctttgttatgtgct
ttgtttatcagtttctttcttggaagtgcatactctgttgatgctccgttactccggtgg
aaaaggaacgcgtttctcgctgcatcttgtatactatttgtaagagctgtcttagttcag
ctagctttctttgcacatatgcagcaacatgttctgaagaggcccttggcaccaacaaag
tcggtggttttcgcaacattattcatgtgttgcttttcttcagttatagctttattcaag
gatattccagatattgatggtgacagacattttggcgtcgaatccctgagcgtacgtttg
ggtccagaaagagtgtattggctctgcataaacatactattaacagcatatggggctgcc
attttggctggagcatcatctacaaatctatgtcaaatgattatcaccgttttcggccat
ggcctgcttgcctttgcactttggcagagagcacagcactgtgacgttgaaaacaaggcg
tggatcacatcattttacatgttcatttggaagttgttctacgctgagtatttccttata
ccatttgtgcagtga
Oryza sativa japonica (Japanese rice) (RefSeq): 4341727
Help
Entry
4341727 CDS
T01015
Name
(RefSeq) probable homogentisate phytyltransferase 1, chloroplastic
KO
K09833
homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:
2.5.1.115
2.5.1.116
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00130
Ubiquinone and other terpenoid-quinone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01240
Biosynthesis of cofactors
Module
osa_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
4341727
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
osa01006
]
4341727
Enzymes [BR:
osa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.115 homogentisate phytyltransferase
4341727
2.5.1.116 homogentisate geranylgeranyltransferase
4341727
Prenyltransferases [BR:
osa01006
]
Compound prenylation
HGA prenyltransferase
4341727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
4341727
NCBI-ProteinID:
XP_015644510
UniProt:
B7FA90
LinkDB
All DBs
Position
6:27087460..27093035
Genome browser
AA seq
404 aa
AA seq
DB search
MDSLRLRPSLLAARAPGAASLPPLRRDHFLPPLCSIHRNGKRPVSLSSQRTQGPSFDQCQ
KFFGWKSSHHRIPHRPTSSSADASGQPLQSSAEAHDSSSIWKPISSSLDAFYRFSRPHTV
IGTALSIVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKP
TLPLASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRW
KRSAVVAALCILAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFK
DIPDIEGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGH
AILAAILWNRSRSIDLTSKTAITSFYMFIWKLFYAEYLLIPLVR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggattcgctgcgcctccggccgtcgctcctcgccgcgcgggcccccggcgcggcctcg
ctgccgcctctccggcgagatcactttctaccacctttatgttctatccatagaaatggt
aaacggccagtttctttgtccagccaaaggacccaaggtccttccttcgatcaatgtcag
aaattctttggttggaaatcctcccaccacaggataccacatcgaccaacatctagttcc
gctgacgcttcgggacaacctctacaatcttcagctgaagcacatgattcatcaagtata
tggaagccaatatcatcttctctggatgcattttacaggttttctcggccacatactgtc
ataggaacagcacttagcatagtctcagtttcgctgctagctgttgagaatttgtccgat
gtgtctcccttgttcctcactggtttgctggaggcagtggtagcagctcttttcatgaac
atctatatcgttggattgaatcagttgttcgacattgagatagataaggttaacaagcca
actcttccattagcatctggggaatattctcctgcaactggagttgcacttgtatcagcc
ttcgctgctatgagctttggccttggatgggctgttggatcacagcctctgttcctggct
cttttcattagctttattcttggaacagcatattcgattaatctgccattcctgagatgg
aagagatctgctgttgttgcagcactttgcatattagcagtccgtgcagtgattgttcag
ctggcattttttctccacattcagacattcgtattcagaagaccagcagtctttaccagg
ccattgatttttgcaactgcattcatgacctttttctccgttgtaatagcattgttcaag
gatatacctgatattgaaggagaccgtatttttggtatcaaatctttcagtgttcgatta
ggtcaaaagaaggttttctggatttgtgttggtctgctcgagatggcttattgtgttgca
atattgatgggagctacttctgcctgtttgtggagcaaatacgcaactgtggtgggacat
gcaatccttgcggcaatcctatggaaccgctcacggtcgattgatctgacaagcaaaact
gcaatcacttctttctacatgtttatctggaagctgttctacgcggaataccttctcatt
cctcttgtaaggtga
DBGET
integrated database retrieval system