Oryza sativa japonica (Japanese rice): 4342997
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Entry
4342997 CDS
T01015
Name
(RefSeq) calcium-dependent lipid-binding protein
KO
K28063
extended synaptotagmin
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4342997
Membrane trafficking [BR:
osa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
4342997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
Motif
Other DBs
NCBI-GeneID:
4342997
NCBI-ProteinID:
XP_015646953
UniProt:
Q0D720
A0A0P0X533
LinkDB
All DBs
Position
7:join(12902790..12902894,12903037..12903138,12904961..12905011,12905839..12905959,12907245..12907363,12907461..12907559,12908170..12908250,12908331..12908413,12909663..12909888,12912758..12912925,12914894..12915286)
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AA seq
515 aa
AA seq
DB search
MGLISGMVMGMVVGVALMAGWSRVMQRRSRKRIAKAADIKVLGSLGRDDLKKLCGDNFPE
WISFPQYEQVKWLNKHLSKLWPFVDQAATAVVKESVEPLLDDYRPPGIKSLKFSKFSLGT
VSPKIEGIRIQNIQPGQIIMDIDLRWGGDPSIILAVDAVVASLPIQLKDLQVYTIVRVVF
QLSEEIPCISAVVVALLAEPEPKIQYTLKAIGGSLTAVPGLSDMIDDTVNSIVSDMLKWP
HRLVVPLGVNVDTSELELKPQGRLTVTVVKATSLKNKELIGKSDPYVILYVRPMFKVKTK
VIDDNLNPEWNETFPLIVEDKETQSVIFEVYDEDRLQQDKKLGVAKLAVNSLQPEATSEI
TLKLQQSLDSLKIKDTKDRGTLHLQVTYHPFSKEEQMEALESEKRAIEERKRLKEAGVIG
STMDALGGAASLVGSGVGLVGTGIVGGVGLVGSGIGAGVGLVGSGVGLVGSGIGAVGSGL
GKAGKFMGKTVAGPFSMSRKNGSSSTAPQAEQPSA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggggctgatctcggggatggtgatggggatggtggtcggcgtcgcgcttatggccggg
tggagccgtgtgatgcagcggcgcagcaggaagcgcatcgctaaggctgcggatatcaag
gtccttgggtctctcggtagggacgatctcaagaagctgtgcggcgacaatttccccgag
tggatatccttcccgcagtatgagcaggtgaaatggctgaacaagcatctcagcaaactc
tggcctttcgttgatcaagctgccactgcagtagtcaaggaatctgttgagccactgcta
gatgattatcgacctccaggaataaaatctctgaagttcagcaaattctctcttggaact
gtttcaccaaagatagaaggtattcgcattcaaaatattcagccaggccaaatcataatg
gatatagatcttcgttggggtggtgatccaagcataatccttgctgttgatgctgttgtt
gcatcacttcctattcagctcaaagatcttcaagtctacaccattgtccgtgttgtattt
caactatcagaggagatcccttgcatctctgctgttgttgttgctcttcttgcagagcca
gagccgaaaatacaatacactttgaaggctattggaggaagtctgaccgctgttccagga
ctctccgacatgattgatgacactgtcaattcaattgtttctgacatgctcaagtggcca
cacaggcttgttgttccacttggtgtcaatgttgatacaagtgagctggagcttaaacct
cagggaagacttactgttactgtagtaaaagcaacttcattgaagaataaggagttgatt
ggtaaatcagatccatatgtgatactatatgtgcgtccaatgttcaaggtcaaaacaaaa
gtcatagatgataacctaaatcctgaatggaatgaaacattccctctgattgttgaagac
aaagaaacccagtctgtcatttttgaggtatatgatgaagacagacttcagcaagacaaa
aagcttggtgtagctaaactagcagtgaacagtcttcaacctgaggctaccagtgaaatc
actttgaaacttcagcaatcactagattctcttaaaattaaggacaccaaggatagagga
acattacatcttcaggtcacatatcacccattttcaaaggaagaacagatggaagcccta
gagtctgaaaagagagctatcgaggagagaaagcgactcaaggaggctggggttattggt
agtacaatggatgctcttggtggtgctgcttcactagttggttctggtgttggacttgtg
ggcactggcattgtcggcggggttggacttgttggatcaggaattggtgctggtgttggg
cttgttggttcgggtgttgggcttgttggttcgggtattggcgctgtcggcagcggcctc
ggtaaagctgggaaattcatgggcaagactgtggccgggcctttcagtatgtcccggaag
aacggtagcagctcaactgctccccaggctgaacaaccttctgcgtga
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integrated database retrieval system
