Oryza sativa japonica (Japanese rice) (RefSeq): 4343080 Help Entry 4343080           CDS       T01015                                  Name (RefSeq) tyrosine decarboxylase 1   KO K01593   aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00350   Tyrosine metabolism osa00360   Phenylalanine metabolism osa00380   Tryptophan metabolism osa00950   Isoquinoline alkaloid biosynthesis osa00965   Betalain biosynthesis osa01100   Metabolic pathways osa01110   Biosynthesis of secondary metabolites Module osa_M00936   Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09105 Amino acid metabolism    00350 Tyrosine metabolism     4343080    00360 Phenylalanine metabolism     4343080    00380 Tryptophan metabolism     4343080   09110 Biosynthesis of other secondary metabolites    00901 Indole alkaloid biosynthesis     4343080    00950 Isoquinoline alkaloid biosynthesis     4343080    00965 Betalain biosynthesis     4343080  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:osa04147]     4343080 Enzymes [BR:osa01000]  4. Lyases   4.1  Carbon-carbon lyases    4.1.1  Carboxy-lyases     4.1.1.28  aromatic-L-amino-acid decarboxylase      4343080     4.1.1.105  L-tryptophan decarboxylase      4343080 Exosome [BR:osa04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    4343080 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyridoxal_deC Aminotran_5 Motif Other DBs NCBI-GeneID:  4343080 NCBI-ProteinID:  XP_015644906 UniProt:  Q7XHL3 LinkDB All DBs Position 7:14667967..14676618 Genome browser AA seq 497 aa AA seqDB search MEGVGGGGGGEEWLRPMDAEQLRECGHRMVDFVADYYKSIEAFPVLSQVQPGYLKEVLPD SAPRQPDTLDSLFDDIQQKIIPGVTHWQSPNYFAYYPSNSSTAGFLGEMLSAAFNIVGFS WITSPAATELEVIVLDWFAKMLQLPSQFLSTALGGGVIQGTASEAVLVALLAARDRALKK HGKHSLEKLVVYASDQTHSALQKACQIAGIFSENVRVVIADCNKNYAVAPEAVSEALSID LSSGLIPFFICATVGTTSSSAVDPLPELGQIAKSNDMWFHIDAAYAGSACICPEYRHHLN GVEEADSFNMNAHKWFLTNFDCSLLWVKDRSFLIQSLSTNPEFLKNKASQANSVVDFKDW QIPLGRRFRSLKLWMVLRLYGVDNLQSYIRKHIHLAEHFEQLLLSDSRFEVVTPRTFSLV CFRLVPPTSDHENGRKLNYDMMDGVNSSGKIFLSHTVLSGKFVLRFAVGAPLTEERHVDA AWKLLRDEATKVLGKMV NT seq 1494 nt NT seq  +upstreamnt  +downstreamnt atggagggagttggcggcggcggcggcggtgaggagtggctgcggccgatggacgcggag cagctgcgggagtgcgggcaccggatggtggatttcgtcgccgactactacaaatccatc gaggccttccccgtcctcagccaagtccagccaggatatctgaaggaagttcttccagat tcagccccaagacaacctgatactttggattccctttttgatgatattcaacaaaaaata ataccaggagtaacgcactggcaaagtccaaattattttgcttactatccttcaaatagc agcactgctggattcctgggggagatgcttagtgctgcctttaacattgttggcttcagt tggataacctctcctgctgctactgagctagaggttatagtcttagactggtttgcaaaa atgctccagcttccaagccagtttctgtcaactgctcttggtggaggagtaatacaaggt actgccagtgaagctgttcttgttgcactattggctgcacgagatagagctttaaagaag catgggaagcattcccttgaaaagttagtagtttatgcatctgaccagacacattctgct ctacaaaaggcatgccagattgcaggaattttctcagagaatgttagggttgtaattgct gattgtaataagaactacgccgttgcccctgaggcagttagtgaggcgctttccatagac ctgtcatctggtttgataccatttttcatctgtgcaacagtaggtacaacatcatcatca gctgtggaccccctgcctgaactaggacagatagcaaagtccaatgacatgtggttccat attgatgccgcatatgctggaagtgcttgtatatgcccagagtaccgacaccacctcaat ggagtggaagaagctgattcgtttaatatgaatgcccacaaatggttcctcactaacttc gattgttccttgctatgggttaaggacaggagttttctcatacaatcattgtctacgaat ccagagtttctcaaaaacaaggcttcccaagctaattcagttgttgatttcaaagattgg caaattccacttggacgacgctttagatcacttaagctatggatggtcttgagactttat ggtgtggacaacctacaaagctatatccggaaacacatacatttggctgaacattttgag caacttttattatctgattcaagatttgaggtagtgactccaaggactttttcacttgtt tgtttccgacttgtgcctcccacttctgaccatgaaaatggacgtaaattgaattacgat atgatggatggtgtaaattcaagtggaaagatcttcctatctcacacggttctttcaggt aagttcgtcttgagatttgcagtaggagcgccacttacagaggagcgacacgtggatgcc gcttggaagcttctacgagatgaggccaccaaggtcttggggaaaatggtgtag

Oryza sativa japonica (Japanese rice) (RefSeq): 4344636 Help Entry 4344636           CDS       T01015                                  Name (RefSeq) aromatic-L-amino-acid decarboxylase   KO K01593   aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00350   Tyrosine metabolism osa00360   Phenylalanine metabolism osa00380   Tryptophan metabolism osa00950   Isoquinoline alkaloid biosynthesis osa00965   Betalain biosynthesis osa01100   Metabolic pathways osa01110   Biosynthesis of secondary metabolites Module osa_M00936   Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09105 Amino acid metabolism    00350 Tyrosine metabolism     4344636    00360 Phenylalanine metabolism     4344636    00380 Tryptophan metabolism     4344636   09110 Biosynthesis of other secondary metabolites    00901 Indole alkaloid biosynthesis     4344636    00950 Isoquinoline alkaloid biosynthesis     4344636    00965 Betalain biosynthesis     4344636  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:osa04147]     4344636 Enzymes [BR:osa01000]  4. Lyases   4.1  Carbon-carbon lyases    4.1.1  Carboxy-lyases     4.1.1.28  aromatic-L-amino-acid decarboxylase      4344636     4.1.1.105  L-tryptophan decarboxylase      4344636 Exosome [BR:osa04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    4344636 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyridoxal_deC Aminotran_1_2 SepSecS Motif Other DBs NCBI-GeneID:  4344636 NCBI-ProteinID:  XP_015648701 UniProt:  Q6ZJK7 Structure PDB LinkDB All DBs Position 8:2256007..2257904 Genome browser AA seq 514 aa AA seqDB search MGSLDTNPTAFSAFPAGEGETFQPLNADDVRSYLHKAVDFISDYYKSVESMPVLPNVKPG YLQDELRASPPTYSAPFDVTMKELRSSVVPGMTHWASPNFFAFFPSTNSAAAIAGDLIAS AMNTVGFTWQASPAATEMEVLALDWLAQMLNLPTSFMNRTGEGRGTGGGVILGTTSEAML VTLVAARDAALRRSGSDGVAGLHRLAVYAADQTHSTFFKACRLAGFDPANIRSIPTGAET DYGLDPARLLEAMQADADAGLVPTYVCATVGTTSSNAVDPVGAVADVAARFAAWVHVDAA YAGSACICPEFRHHLDGVERVDSISMSPHKWLMTCLDCTCLYVRDTHRLTGSLETNPEYL KNHASDSGEVTDLKDMQVGVGRRFRGLKLWMVMRTYGVAKLQEHIRSDVAMAKVFEDLVR GDDRFEVVVPRNFALVCFRIRAGAGAAAATEEDADEANRELMERLNKTGKAYVAHTVVGG RFVLRFAVGSSLQEEHHVRSAWELIKKTTTEMMN NT seq 1545 nt NT seq  +upstreamnt  +downstreamnt atgggcagcttggacaccaaccccacggccttctccgccttccccgccggcgagggtgaa accttccagccgctcaacgccgatgatgtccggtcctacctccacaaggcggtggacttc atctcggactactacaagtccgtggagtccatgccggtgctgcccaatgtcaagccgggg tacctgcaggacgagctcagggcctcgccgccgacgtactcggcgccgttcgacgtcacc atgaaggagctccggagctccgtcgtccccgggatgacgcactgggcgagccccaacttc ttcgcgtttttcccctccacgaatagtgcggccgccattgccggcgacctcatcgcgtcg gcgatgaacacggtcgggttcacgtggcaggcgtcgccggcggccaccgagatggaggtg ctcgcgctggactggctcgcgcagatgctcaacctgccgacgagcttcatgaaccgcacc ggcgaggggcgtggcaccggcggtggggttattctggggacgaccagcgaggcgatgctc gtcacgctcgttgccgcgcgcgacgccgcgctgcggcggagcggcagcgacggcgtggcg ggactccaccggctcgccgtgtacgccgccgaccagacgcactccacgttcttcaaggcg tgccgcctcgccgggtttgatccggcgaacatccggtcgatccccaccggggccgagacc gactacggcctcgacccggcgaggctgctggaggcgatgcaggccgacgccgacgccggg ctggtgcccacctacgtgtgcgccacggtgggcaccacgtcgtccaacgccgtcgacccg gtgggcgccgtggccgacgtcgcggcgaggttcgccgcgtgggtgcacgtcgacgcggcg tacgccggcagcgcgtgcatctgcccggagttcaggcaccacctcgacggcgtggagcgc gtggactccatcagcatgagcccccacaaatggctgatgacctgcctcgactgcacctgc ctctacgtgcgcgacacccaccgcctcaccggctccctcgagaccaacccggagtacctc aagaaccacgccagcgactccggcgaggtcaccgacctcaaggacatgcaggtcggcgtc ggccgccgcttccgggggctcaagctctggatggtcatgcgcacctacggcgtcgccaag ctgcaggagcacatccggagcgacgtcgccatggccaaggtgttcgaggacctcgtccgc ggcgacgacaggttcgaggtcgtcgtgccgaggaacttcgctctcgtctgcttcaggatc agggccggcgccggcgccgccgccgcgacggaggaggacgccgacgaggcgaaccgcgag ctgatggagcggctgaacaagaccggcaaggcgtacgtggcgcacacggtggtcggcggc aggttcgtgctgcgcttcgcggtgggctcgtcgctgcaggaagagcatcacgtgcggagc gcgtgggagctcatcaagaagacgaccaccgagatgatgaactaa

Oryza sativa japonica (Japanese rice) (RefSeq): 4344637 Help Entry 4344637           CDS       T01015                                  Name (RefSeq) aromatic-L-amino-acid decarboxylase   KO K01593   aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00350   Tyrosine metabolism osa00360   Phenylalanine metabolism osa00380   Tryptophan metabolism osa00950   Isoquinoline alkaloid biosynthesis osa00965   Betalain biosynthesis osa01100   Metabolic pathways osa01110   Biosynthesis of secondary metabolites Module osa_M00936   Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09105 Amino acid metabolism    00350 Tyrosine metabolism     4344637    00360 Phenylalanine metabolism     4344637    00380 Tryptophan metabolism     4344637   09110 Biosynthesis of other secondary metabolites    00901 Indole alkaloid biosynthesis     4344637    00950 Isoquinoline alkaloid biosynthesis     4344637    00965 Betalain biosynthesis     4344637  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:osa04147]     4344637 Enzymes [BR:osa01000]  4. Lyases   4.1  Carbon-carbon lyases    4.1.1  Carboxy-lyases     4.1.1.28  aromatic-L-amino-acid decarboxylase      4344637     4.1.1.105  L-tryptophan decarboxylase      4344637 Exosome [BR:osa04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    4344637 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyridoxal_deC SepSecS Aminotran_1_2 Motif Other DBs NCBI-GeneID:  4344637 NCBI-ProteinID:  XP_015648768 UniProt:  Q0J832 Q6YZ18 LinkDB All DBs Position 8:complement(2268447..2270606) Genome browser AA seq 523 aa AA seqDB search MGSLDANPAAAYAAFAADVEPFRPLDADDVRSYLHKAVDFVYDYYKSVESLPVLPGVEPG YLLRLLQSAPPSSSAPFDIAMKELREAVVPGMTHWASPNFFAFFPATNSAAAIAGELIAS AMNTVGFTWQAAPAATELEVLALDWLAQLLGLPASFMNRTVAGGRGTGGGVILGTTSEAM LVTLVAARDAALRRSGSNGVAGITRLTVYAADQTHSTFFKACRLAGFDPANIRSIPTGAE TDYGLDPARLLEAMQADADAGLVPTYVCATVGTTSSNAVDPVGAVADVAARFAAWVHVDA AYAGSACICPEFRHHLDGVERVDSISMSPHKWLMTCLDCTCLYVRDTHRLTGSLETNPEY LKNHASDSGEVTDLKDMQVGVGRRFRGLKLWMVMRTYGAGKLQEHIRSDVAMAKTFEDLV RGDDRFEVVVPRNFALVCFRIRPRKSGAAIAAGEAEAEKANRELMERLNKTGKAYVAHTV VGGRFVLRFAVGSSLQEERHVRSAWELIKKTTTEIVADAGEDK NT seq 1572 nt NT seq  +upstreamnt  +downstreamnt atggggagcttggacgccaacccggccgccgcctacgccgcgttcgccgccgacgtcgag cccttccgcccgctcgacgccgacgacgtccgctcctacctccacaaggccgtcgacttc gtctacgactactacaagtcggtggagtcgctcccggtgctccctggcgtcgagccgggc tacctcctgcggctgctgcagtcggcgccgccgtcgtcgtcggcgccgttcgatattgct atgaaggagctcagggaggcggttgtccccgggatgacccactgggcgagcccgaatttc ttcgcgttctttccggcgacgaatagcgccgccgcgatcgccggtgagctcatcgcgtcg gcgatgaacaccgtcggattcacgtggcaggcggcgccggcggcgaccgagctggaggtg ctcgcgctggattggctcgcgcagctgctcgggttgccggcgagtttcatgaaccgcacc gtcgccggtgggcgcggcaccggcgggggcgtcattctggggaccaccagcgaggcgatg ctcgtcacgctcgtcgccgcgcgcgacgccgcgctgcggcggagcgggtccaatggcgtg gcgggcatcacgcggctgacggtgtacgccgccgaccagacgcactccacgttcttcaag gcgtgccgcctcgccgggttcgatccggcgaacatccggtcgatccccaccggggccgag accgactacggcctcgacccggcgaggctgctggaggcgatgcaggccgacgccgacgcc gggctggtgcccacctacgtgtgcgccacggtgggaaccacgtcgtccaacgccgtcgac ccggtgggcgccgtggccgacgtcgcggcgaggttcgcggcgtgggtgcacgtcgacgcg gcgtacgccggcagcgcgtgcatctgcccggagttccggcaccacctcgacggcgtggag cgtgtcgactccatcagcatgagcccccacaagtggctgatgacctgcctcgactgcacc tgcctctacgtccgcgacacccaccgcctcaccggctccctcgagaccaacccggagtac ctcaagaaccacgccagcgactccggcgaggtcaccgacctcaaggacatgcaggtcggc gtcggccgccgcttccgggggctcaagctctggatggtcatgcgcacctacggcgccggc aagctgcaggagcacatccggagcgacgtcgccatggccaagacgttcgaggacctcgtc cgcggcgacgaccggttcgaggtcgtggtgccgaggaacttcgcgctcgtctgcttcagg atcaggccgaggaaatccggcgccgccatcgccgccggcgaggcggaggccgagaaggcg aaccgcgagctgatggagcggctgaacaagaccggaaaggcttacgtggcgcacacggtg gtcggcggcaggttcgtgctgcgcttcgcggtggggtcgtcgctgcaggaggagcggcac gtgcgaagcgcgtgggagctcatcaagaagacgaccaccgagatcgtcgccgacgccgga gaagacaagtag

Oryza sativa japonica (Japanese rice) (RefSeq): 4348564 Help Entry 4348564           CDS       T01015                                  Name (RefSeq) tyrosine decarboxylase 1   KO K01593   aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00350   Tyrosine metabolism osa00360   Phenylalanine metabolism osa00380   Tryptophan metabolism osa00950   Isoquinoline alkaloid biosynthesis osa00965   Betalain biosynthesis osa01100   Metabolic pathways osa01110   Biosynthesis of secondary metabolites Module osa_M00936   Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09105 Amino acid metabolism    00350 Tyrosine metabolism     4348564    00360 Phenylalanine metabolism     4348564    00380 Tryptophan metabolism     4348564   09110 Biosynthesis of other secondary metabolites    00901 Indole alkaloid biosynthesis     4348564    00950 Isoquinoline alkaloid biosynthesis     4348564    00965 Betalain biosynthesis     4348564  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:osa04147]     4348564 Enzymes [BR:osa01000]  4. Lyases   4.1  Carbon-carbon lyases    4.1.1  Carboxy-lyases     4.1.1.28  aromatic-L-amino-acid decarboxylase      4348564     4.1.1.105  L-tryptophan decarboxylase      4348564 Exosome [BR:osa04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    4348564 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyridoxal_deC Beta_elim_lyase Aminotran_5 Aminotran_1_2 DUF3289 Motif Other DBs NCBI-GeneID:  4348564 NCBI-ProteinID:  XP_015613814 UniProt:  Q338J0 LinkDB All DBs Position 10:complement(13523613..13525968) Genome browser AA seq 515 aa AA seqDB search MGSLPLDALQPLDPDTFAADSSAVVDFLAGYYRDVDKYPVRAADLEPGRLRRLLPEAAPE FGEPAERILADVRRDVLPGLTHWQSPSFFAYFPMNASAAGFAGEMLSVGLNVVPFMWVAS PAAVELEAVVVDWMARLVGLPDRFLFSGSGGGGGGGGGGVLQGSTCEAVVCTLAAARDRA LGRIGHEGIVKLVVYASDQTHATFQKGARLVGITPANFRVVPTAAASGYALTGAAVRAAV EGDVARGLVPLYLCATVGTTGIGAVDPVRELGEVARRHGMWLHVDAAYAGSAAICPEYQG YLDGAELADSVSMNPHKWFLTNMDCCCLWVASPAALTAALSTDPEYLKNAGGGKPQAAAG AGAIDYKDWQISLSRRFRAMKLWFVLRRYGAAGMRAHIRRHVAMAEWFERAVSADERFEV VAKRRFSLVCFRLRGGGGGGDAMNRELLAAVNASGRAFMTHFVVEGKFVIRLAVGGAMTE MRHVGDAWELVQRTAEQLLQRRGTRKNEDENPLPW NT seq 1548 nt NT seq  +upstreamnt  +downstreamnt atgggtagcttgccactcgacgcgctccagccactggacccggacaccttcgccgccgac tcctccgccgtcgtcgacttcctcgccggctactaccgcgacgtcgacaagtaccccgtc cgcgccgccgacctcgagcctggccgcctccgcaggctcctcccggaggccgcgccggag ttcggggagccggcggagcggatcctcgctgacgtgcgccgcgacgtgctcccggggctc acgcactggcagagccccagcttcttcgcctacttcccgatgaacgccagcgccgccggg ttcgccggcgagatgctctccgtggggctcaacgtcgtgccgttcatgtgggttgcgtcg ccggctgccgtggagctggaggccgtcgtggtggactggatggctaggctggtgggcttg cctgatcgcttcctcttctccggctccggcggcggcggcggcggcggtggcggtggtgtt ctgcaggggagcacctgcgaggccgtggtgtgcacgctcgccgccgcgcgggaccgcgcg ctggggaggattgggcacgagggcatcgtgaagctggtggtgtacgcctccgaccagacg cacgccacgttccagaagggcgcgcggctggtcggcatcacgccggcgaacttccgcgtc gtcccgacggcggcggcgtcggggtacgcgctgacgggcgccgccgtgcgcgccgcggtg gagggcgacgtggcgcgcgggctggtcccgctgtacctgtgcgccactgtgggcaccacg gggatcggcgccgtcgaccccgtccgcgagctcggcgaggtggcgcgccgccacggcatg tggctccacgtcgacgccgcgtacgccggcagcgcggcgatctgcccggagtaccagggc tacctcgacggcgccgagctcgccgactcggtgagcatgaacccgcacaagtggttcctc accaacatggactgctgctgcctctgggtggcgagccccgccgcgctcaccgccgcgctg tccaccgacccggagtacctcaagaacgccggcggcgggaagccccaggccgccgccggc gccggcgccatcgactacaaggactggcagatctcgctgtcgcggcggttccgcgccatg aagctctggttcgtgctgcggcggtacggcgctgcgggcatgcgcgcgcacatccggcgc cacgtcgccatggccgagtggttcgagcgcgcggtgagcgccgacgagcggttcgaggtg gtggcgaagaggaggttctccctcgtgtgcttccgcctccgcggcggcggcggcggcggc gacgcgatgaaccgcgagctcctggcggcggtgaacgcgagcgggcgggcgttcatgacg cacttcgtggtggagggcaagttcgtgatccggctcgccgtcggcggcgccatgacggag atgaggcatgtcggcgacgcgtgggagctggtgcagcgcacggcggagcagctgctgcag cgccgggggacacgtaaaaacgaggatgaaaatccacttccctggtag

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