Entry |
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Name |
(RefSeq) E3 ubiquitin protein ligase RIN2
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KO |
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Organism |
osa Oryza sativa japonica (Japanese rice)
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Pathway |
osa04141 | Protein processing in endoplasmic reticulum |
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Brite |
KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
4343241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:osa04121]
4343241
Enzymes [BR:osa01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
4343241
Ubiquitin system [BR:osa04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4343241
Multi subunit Ring-finger type E3
ERAD complex
4343241
LMBR1L-GP78-UBAC2 complex
4343241
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
7:complement(join(17910324..17910383,17910471..17910831,17914134..17914340,17915023..17915090,17915176..17915313,17915402..17915559,17916114..17916219,17916440..17916536,17918088..17918209,17918287..17918373,17919218..17919295,17920686..17920916))
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AA seq |
570 aa
MAAVNSLYVAAASTAASAAALQWWAGSLLDGDADAAGGGGGGGGGDWLGTVLGSHVTVAL
LANLAAHVFLVLILSLKTLFFVQLTSSETRKVLEHIINYVLYKGTFLPLVVPPNSQQIIL
WSSWLGLLCSLKMFQSLARERLEQLNASPSATPSKYFRVYSALLLVLSADVLWIKLCVGF
CKSCNSQLFWLMFFEPLSIGFETLQSIMVHGFQLFDIWQRHQMDSGVDYLDFQKTYKQAA
GSFSEWRGRLVRNFGFVIDLISLLMSLGHYSMIFWLRGMAFHLVDAVLLLNLRALIASFW
KRIKTYAKLRKALSSLDGALPDATYDEICAYDDECAICRGPMARAKKLSCNHLFHLACLR
SWLDQGLMDGYSCPTCRRPLFLSSQGHTRSTAEVGNVQLIAEQLNAGLNQQRVPGHEHPI
EHQNPADAVWRGAGLDSSWAPPWSSPGMDNPSSSSAVTSVGLSGVQMMMRQLTSVTDNYG
HPDATWSLWPEPVAGSSVVPSSSSRPDGASAAGLRFRGTARPANGSMSEVLSMVDRVREV
LPHIPDELIIEDLMRTNNINATVNNLLLMQ |
NT seq |
1713 nt +upstreamnt +downstreamnt
atggcggcggtgaacagcctctacgtcgccgcggcatccaccgcggccagcgccgcggcg
ctgcagtggtgggcggggtccctcctcgacggggatgccgacgcggcgggcgggggagga
ggaggaggaggaggggactggctcggcacggtgctgggctcgcacgtgaccgtcgcgctc
ctggcgaatctggcggcgcacgtgttcctcgtcctcatcctctccctcaagacactattt
tttgttcaattaacctcttctgagactagaaaggtgttggaacacatcattaactatgtg
ctttacaagggaacttttctcccactggttgtgcctcctaattctcaacaaataatcctt
tggtcaagttggttgggccttctttgttccctgaagatgtttcaatcattggctagagaa
cgccttgaacagctcaatgcttcaccatcagcgactccatcaaaatactttcgtgtatat
tctgcactattgctggttctatcggctgatgtactatggataaagctttgtgttgggttc
tgcaagtcgtgtaattctcaactattttggcttatgttttttgagccacttagtattggc
tttgagacactgcagtcaatcatggtgcatggatttcagttgtttgacatatggcaacga
catcaaatggacagtggtgtggactatcttgatttccaaaaaacttataagcaagcagca
ggatctttttctgagtggagaggcagactagtcagaaattttggttttgtcattgacttg
ataagcttattgatgtcacttggtcattactcaatgatcttctggctccgtggtatggcg
tttcatctggttgacgctgttctcctattgaacttgcgcgctcttatagcttcattttgg
aagcggataaaaacttatgccaagttacgaaaggcacttagttcactcgacggagcactt
ccagatgctacatatgatgaaatctgtgcatacgacgatgagtgtgccatctgtagggga
ccaatggctcgagctaaaaagttatcctgcaaccatctatttcatctagcttgcttgcga
tcatggttggaccaaggattaatggatggttactcatgtccaacttgtcgaagacctctc
tttctgtcatctcaaggtcacacaagatctacagcagaggtaggaaacgtccagttaatt
gcagaacaacttaatgcggggttgaatcagcagagggttcctggtcatgaacatcctatt
gaacatcagaatcctgcagatgctgtttggagaggtgctggtcttgattctagctgggca
ccaccatggtcgagccctgggatggacaatcccagttcttccagcgccgtgacatcagtg
gggcttagtggagttcagatgatgatgaggcagttgacttcagtgactgataattatggg
catccagatgccacctggagtctatggcctgagccagttgcaggatcttcggttgttcca
tcctcttcctcgaggcctgatggtgcttcagctgctggcttgcggttccgaggcactgca
agacccgcgaatggtagcatgtcggaggttctctccatggtagatagagtacgagaagtt
ttaccccatatccctgacgagctaattattgaggatctgatgagaacaaataatataaac
gctactgtaaataatcttctgctgatgcaataa |