KEGG   Oryza sativa japonica (Japanese rice): 4343241
Entry
4343241           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4343241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4343241
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     4343241
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4343241
  Multi subunit Ring-finger type E3
   ERAD complex
    4343241
   LMBR1L-GP78-UBAC2 complex
    4343241
SSDB
Motif
Pfam: CUE zf-RING_2 zf-rbx1 zf-C3HC4 zf-ANAPC11 zf-RING_11 zf-RING_UBOX zf-C3HC4_2 zf-RING_16 zf-C3HC4_3 zf-RING_5 E3_UbLigase_EDD
Other DBs
NCBI-GeneID: 4343241
NCBI-ProteinID: NP_001409086
LinkDB
Position
7:complement(join(17910324..17910383,17910471..17910831,17914134..17914340,17915023..17915090,17915176..17915313,17915402..17915559,17916114..17916219,17916440..17916536,17918088..17918209,17918287..17918373,17919218..17919295,17920686..17920916))
AA seq 570 aa
MAAVNSLYVAAASTAASAAALQWWAGSLLDGDADAAGGGGGGGGGDWLGTVLGSHVTVAL
LANLAAHVFLVLILSLKTLFFVQLTSSETRKVLEHIINYVLYKGTFLPLVVPPNSQQIIL
WSSWLGLLCSLKMFQSLARERLEQLNASPSATPSKYFRVYSALLLVLSADVLWIKLCVGF
CKSCNSQLFWLMFFEPLSIGFETLQSIMVHGFQLFDIWQRHQMDSGVDYLDFQKTYKQAA
GSFSEWRGRLVRNFGFVIDLISLLMSLGHYSMIFWLRGMAFHLVDAVLLLNLRALIASFW
KRIKTYAKLRKALSSLDGALPDATYDEICAYDDECAICRGPMARAKKLSCNHLFHLACLR
SWLDQGLMDGYSCPTCRRPLFLSSQGHTRSTAEVGNVQLIAEQLNAGLNQQRVPGHEHPI
EHQNPADAVWRGAGLDSSWAPPWSSPGMDNPSSSSAVTSVGLSGVQMMMRQLTSVTDNYG
HPDATWSLWPEPVAGSSVVPSSSSRPDGASAAGLRFRGTARPANGSMSEVLSMVDRVREV
LPHIPDELIIEDLMRTNNINATVNNLLLMQ
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggcggcggtgaacagcctctacgtcgccgcggcatccaccgcggccagcgccgcggcg
ctgcagtggtgggcggggtccctcctcgacggggatgccgacgcggcgggcgggggagga
ggaggaggaggaggggactggctcggcacggtgctgggctcgcacgtgaccgtcgcgctc
ctggcgaatctggcggcgcacgtgttcctcgtcctcatcctctccctcaagacactattt
tttgttcaattaacctcttctgagactagaaaggtgttggaacacatcattaactatgtg
ctttacaagggaacttttctcccactggttgtgcctcctaattctcaacaaataatcctt
tggtcaagttggttgggccttctttgttccctgaagatgtttcaatcattggctagagaa
cgccttgaacagctcaatgcttcaccatcagcgactccatcaaaatactttcgtgtatat
tctgcactattgctggttctatcggctgatgtactatggataaagctttgtgttgggttc
tgcaagtcgtgtaattctcaactattttggcttatgttttttgagccacttagtattggc
tttgagacactgcagtcaatcatggtgcatggatttcagttgtttgacatatggcaacga
catcaaatggacagtggtgtggactatcttgatttccaaaaaacttataagcaagcagca
ggatctttttctgagtggagaggcagactagtcagaaattttggttttgtcattgacttg
ataagcttattgatgtcacttggtcattactcaatgatcttctggctccgtggtatggcg
tttcatctggttgacgctgttctcctattgaacttgcgcgctcttatagcttcattttgg
aagcggataaaaacttatgccaagttacgaaaggcacttagttcactcgacggagcactt
ccagatgctacatatgatgaaatctgtgcatacgacgatgagtgtgccatctgtagggga
ccaatggctcgagctaaaaagttatcctgcaaccatctatttcatctagcttgcttgcga
tcatggttggaccaaggattaatggatggttactcatgtccaacttgtcgaagacctctc
tttctgtcatctcaaggtcacacaagatctacagcagaggtaggaaacgtccagttaatt
gcagaacaacttaatgcggggttgaatcagcagagggttcctggtcatgaacatcctatt
gaacatcagaatcctgcagatgctgtttggagaggtgctggtcttgattctagctgggca
ccaccatggtcgagccctgggatggacaatcccagttcttccagcgccgtgacatcagtg
gggcttagtggagttcagatgatgatgaggcagttgacttcagtgactgataattatggg
catccagatgccacctggagtctatggcctgagccagttgcaggatcttcggttgttcca
tcctcttcctcgaggcctgatggtgcttcagctgctggcttgcggttccgaggcactgca
agacccgcgaatggtagcatgtcggaggttctctccatggtagatagagtacgagaagtt
ttaccccatatccctgacgagctaattattgaggatctgatgagaacaaataatataaac
gctactgtaaataatcttctgctgatgcaataa

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