KEGG   Oryza sativa japonica (Japanese rice): 4344474
Entry
4344474           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4344474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4344474
Spliceosome [BR:osa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    4344474
 Complex B
    4344474
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    4344474
SSDB
Motif
Pfam: SMN_Tudor TUDOR Tudor_3 Agenet SGF29_Tudor Seryl_tRNA_N
Other DBs
NCBI-GeneID: 4344474
NCBI-ProteinID: XP_015650899
UniProt: Q6ZC63
LinkDB
Position
8:complement(join(519289..519456,519721..519849,520261..520446,521000..521075,521171..521253,521472..521579,522114..522191,523456..523521))
AA seq 297 aa
MEDLSVEELASNLSTYKEQLREVRKIIKEKNDDPGISEYLDMEKELQEVITLTEELLATA
NQSGNTQNDVGLSPPNYSSGLQSEALDDPSQSHEKFAVGTKVQAVWSEDGEWYNATIEEL
TENGYYVSFEGWGNKEEVDPANVRSLEEEAADALRQAEKEAEATKMAIKRKIEQAATSDF
QMRSLPTKLRIDPNDPEDVKATKRKKIHAFKSKARFEQLEFAQNKRQNAWQQFQTTKGKA
KKVGFFSGRKKESIFKSPDDHRGKVGVTGSGKGLTEFQRREKHLHLKDGSSDALDEE
NT seq 894 nt   +upstreamnt  +downstreamnt
atggaggatctgagcgtggaggagctcgcctccaatctctccacctacaaggagcagctc
cgcgaggttaggaagattatcaaggagaaaaacgatgatcctggaatttctgaatacctt
gatatggaaaaggaacttcaagaggttattacattaacagaagagcttttggcaactgca
aatcaaagtgggaacacccagaatgatgtaggtctatcaccgccaaattattcaagcgga
ctgcagtcagaggcactggatgacccttcgcaatcccatgagaagtttgcagttgggact
aaagtgcaagctgtgtggagtgaagatggggagtggtacaatgcaacaattgaagaactg
acagaaaacggctattatgtaagctttgagggctggggaaacaaagaggaggttgaccct
gctaatgtaagatcgcttgaggaagaagctgctgatgctttgcgtcaagctgaaaaggaa
gctgaagctaccaaaatggcaataaagaggaaaattgaacaggcagcaacatctgacttt
cagatgcgtagcttacccaccaaactccgtatcgatccaaatgatccggaggatgtgaaa
gccacaaagcgtaagaagatccatgcattcaagtcaaaagcccgctttgagcagctagaa
tttgcacaaaataagaggcagaatgcatggcagcagttccaaacgaccaaagggaaagcc
aaaaaggttgggttcttttccggtcgcaaaaaggagagcatcttcaagtcaccggatgat
cacagaggtaaggtcggtgtcactgggagcgggaaaggccttaccgagttccagagaagg
gagaagcacctccatctcaaggatggctcttccgatgcattggacgaggaataa

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