Oryza sativa japonica (Japanese rice): 4344572
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Entry
4344572 CDS
T01015
Symbol
OsJ_25904
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4344572 (OsJ_25904)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4344572 (OsJ_25904)
Spliceosome [BR:
osa03041
]
Complex C
Other components
Step II factors
4344572 (OsJ_25904)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
4344572
NCBI-ProteinID:
NP_001390314
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All DBs
Position
8:join(1596778..1596793,1597070..1597233,1597336..1597448,1597693..1598242,1598357..1598656,1599233..1599449,1599826..1599929,1600020..1600166)
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AA seq
536 aa
AA seq
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MATASVSFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNADKP
SLKHQRNWKSDPNYTKSWYDRGAKLFQANKYRKGACENCGAMTHDKKSCMERPRSVGAKW
TNINIAPDEKVESFELDYDGKRDRWNGYDPSTYTRVIADYEAREEARKKYLKEQQLKKLE
EKDGEEGDENVASEEEDEEDGLKIDEAKVDESAQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNDKFYVGDNQNRLSGQALEFKQLNI
HAWEAFDKGQDIHMQAAPSQAELLFKSFKIKKEKLKSENKDKIMEKYGNAASEEPIPREL
LLGQSEKEIEYDRTGRIIKGQDVALPKSKYEEDVFINNHTTVWGSWWKDHQWGYKCCKQT
IRNSYCTGLAGIEAAEASADLMKANMARKEAAEDEPVRHEEKRLATWGTDVPNDIVLDKK
LLDEALKKEGARRKEEMDERKRKYNVKWNDEVTAEDMEAYRMKRIHHDDPMRDFLH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcttcggtgtcgtttaagtctagagaggatcaccggaagcagctcgagctc
gaggaggcgaggaaggctgggctcgcgcccgccgaggtcgacgaggatggaaaggagatc
aatccccatatcccccagtacatgtcctcagccccatggtatcttaacgctgataagccg
agtttgaagcatcaacggaattggaaatcggacccgaactacaccaagtcatggtacgat
aggggtgctaagctttttcaggctaacaagtacaggaaaggagcttgtgagaactgtgga
gccatgactcatgacaagaagtcatgcatggaacgacctcgcagtgtgggagctaaatgg
actaacatcaatatagcaccagatgagaaagtggagtcatttgaactggattatgatgga
aagcgtgatcgctggaacggttacgacccatcgacgtacacccgtgttattgcagattat
gaagctagagaagaggctaggaaaaagtatctgaaagagcaacagctcaagaaacttgag
gagaaggatggtgaggagggtgacgagaacgtggctagtgaggaggaggatgaagaagat
ggtttgaagatagatgaggctaaagttgatgagagtgctcaaatggattttgctaaggta
gagaagcgtgtacgtacaacaggtggtggaagcactggaactgtgaggaatttgcgtatt
agggaagacactgcaaagtatcttctgaaccttgatgtgaactctgcatactatgatcca
aaaacccgctccatgcgtgaagatccattgccagatgcagaccccaatgataaattctat
gtgggtgataaccaaaatcgacttagcggacaagctctggagttcaagcaactcaacata
catgcgtgggaagcttttgataagggacaggatattcacatgcaagctgccccatctcaa
gctgaacttctattcaagagttttaagatcaaaaaggagaaattgaaatctgaaaacaaa
gataagattatggagaagtatgggaatgctgcatctgaagaaccaatccctcgggagctt
cttcttggacaaagtgaaaaagagattgaatatgaccgaactggtcgaataatcaaagga
caggatgtagcccttcccaagagcaaatatgaagaggatgttttcattaataaccataca
accgtatggggctcatggtggaaagatcatcagtggggctacaaatgctgcaagcagact
atccgaaatagctactgcactggcttagctggaattgaggctgctgaagcatcggctgat
ttgatgaaggcaaatatggcccgcaaggaagctgcagaagatgagcctgtacgacatgaa
gaaaagcgactggccacctggggaactgatgtgcctaatgatattgttcttgacaagaag
ctgcttgatgaagccctaaagaaggagggtgcgaggaggaaagaggagatggatgaaagg
aagaggaagtacaatgtgaaatggaatgatgaggtcaccgcggaagacatggaggcttac
cgcatgaagagaattcaccatgatgatcctatgagggatttcctccattag
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integrated database retrieval system
