Oryza sativa japonica (Japanese rice) (RefSeq): 4345136
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Entry
4345136 CDS
T01015
Name
(RefSeq) nuclear nucleic acid-binding protein C1D
KO
K12592
exosome complex protein LRP1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4345136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4345136
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
4345136
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sas10_Utp3
Motif
Other DBs
NCBI-GeneID:
4345136
NCBI-ProteinID:
XP_015648663
UniProt:
A0A0P0XEB0
Q6YX09
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Position
8:10329425..10335440
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AA seq
207 aa
AA seq
DB search
MAAAAAADSTSAVPPAVVSAAEDTLAAAESVGDHLAEMVAAAGEDPDAIAELPPLRRARA
FLAMAKAAASLFAVRLRCSGVDPDEHPIKKEFERLSLWEEKLNRFEDWDKAPLRPTTTVN
TQAAARFIGHSLPHLTTDQKRSMQAISRGEGGSYSGNKRKPQPPRPNKKSVRAATEEFLA
KAALELSGHNDSKVKGPIRLLSDEDED
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgccgccgattccacttcggcggtgccacccgccgtggtgtccgcc
gccgaggacaccctcgcggccgccgagtccgtcggggaccacctcgccgagatggtcgcg
gcggcgggcgaggaccccgacgccatcgccgagctcccgccgctgcgccgcgcgcgcgcg
tttctcgccatggcgaaggccgccgcctccctcttcgcagtgcggcttaggtgttcggga
gttgatccggatgaacaccctatcaagaaggagtttgagaggttaagcttgtgggaggaa
aagttaaatcgatttgaggactgggacaaggcaccattgcgcccaaccactacagtgaat
acacaggcagcagcaaggttcattggtcactcattgccccatttgacaactgatcagaag
aggagcatgcaggcaatcagtagaggagaaggagggagttactctgggaacaagagaaaa
ccacaaccaccgcggccaaataagaagtctgttcgtgctgccacggaagaattccttgca
aaagcagctctggagcttagtgggcataatgatagcaaggtgaagggccctattaggctc
ctctctgatgaagatgaggactaa
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