Oryza sativa japonica (Japanese rice): 4345946
Help
Entry
4345946 CDS
T01015
Name
(RefSeq) pre-mRNA-splicing factor CWC25 homolog
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4345946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4345946
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
4345946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CWC25
Cir_N
Motif
Other DBs
NCBI-GeneID:
4345946
NCBI-ProteinID:
NP_001409545
LinkDB
All DBs
Position
8:complement(join(24841421..24842464,24842610..24842771,24843448..24843595,24844036..24844223))
Genome browser
AA seq
513 aa
AA seq
DB search
MGMKFLNKKGWHTGSLRNIERVWVAEEKEKEEQRKIQELKKQQDEEREKAAFRKLQEDAG
LKPRQERLDFLYESGLAVGKGSSEGFQALQPSAPAAAAAASSSAQASAGSSKAAAPGALF
EDKPQSANDAWRKLHTDPLLLIRQREQDAIARIKNNPIKMAEIKKSVEAEKKQKEEKKEK
RKHKKRHHHKSKSKRHHSSENSDSEESDGRDERRKSVQASEHKREEKRSRHDKKDHGQDS
EDDERRKRRHATSEDDEPRKSQKEKKGQREDSEDDKPKKSRKDRRRHDSEDEEPRRKHQR
SEDDEPKRRQSEVSGDDEPRRRRQEMPKHDEYSRRGRSDADDRRGRHYTPSDDRRGRHYT
PSDHNSAYPKHDSSDSRHRRPEYGRGNSTSELGSEGQRRQESQQGRNGPTFNRRRGVQHM
SEEEREARLRQMQADAEVHEEQRWSRLKKAADDDAKEAASVNANQFRGKNFLEEEKKSIF
GTEKGGSATIEESIRRRAYYSQRNAHESNAFRR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaaatttctgaacaagaaggggtggcacacggggagccttcggaacatcgag
cgcgtgtgggtggccgaggagaaggagaaggaggagcagcggaagatccaggagctgaag
aagcagcaggacgaggagcgggagaaggccgccttccgcaagctccaggaggacgccggc
ctcaagccgaggcaagagagattggacttcctctacgagtcagggttggctgttggcaag
gggagctccgagggattccaagcgctgcaaccatctgccccagcagctgctgccgccgcc
tcttcttctgcccaagcgagtgccggctcttccaaggcagctgctccaggtgcattattt
gaggataagccccaatctgcaaatgatgcatggagaaaactccacactgatcctcttcta
ctaataaggcagcgggagcaggatgccattgcaagaataaaaaataatccaatcaagatg
gctgagataaagaaatcagtggaagctgagaaaaagcaaaaggaagaaaagaaagagaag
agaaagcacaagaagcgccatcatcacaaatcaaagagtaagaggcatcactcaagtgag
aactcagattcagaggaaagtgatggcagggatgagagaagaaagagtgttcaggcctca
gagcataagagagaagagaaaaggtcaagacatgataagaaggatcacggacaagattca
gaagacgatgaacgaaggaaaagacggcatgcaacgtcagaagatgatgagccaaggaag
tcacagaaggagaagaaaggacagagggaagattcagaagatgacaagccaaagaagtca
aggaaagaccgcagaagacatgattcagaagatgaagaaccaaggagaaaacaccagagg
tcagaagatgatgaaccaaaaagaagacaatctgaggtttccggagatgatgaaccaagg
agaagaaggcaggagatgccaaagcatgacgaatattcacgacggggtcgttcggatgct
gatgataggagagggagacactatactccgtcagatgataggagagggagacactatact
ccgtcagaccacaacagtgcttatccaaagcacgacagttcagattcaaggcataggcga
ccggaatatggacgcggcaattccacttctgaactaggttcagaaggccaacgaaggcag
gaaagccagcagggcaggaacggccctacattcaaccgtcgacggggtgtccagcacatg
tcagaggaagaaagggaagctcgacttcgtcaaatgcaggctgacgcagaggtccacgaa
gaacaaagatggagcaggctcaagaaagctgcagacgacgatgccaaggaggcggcatct
gtgaacgcaaaccaattcagagggaagaacttcttggaagaagaaaagaagagcatattt
ggaaccgagaagggcggaagcgccacgatcgaagagagcatccggcgccgtgcgtattat
tcgcagcgtaatgcccatgagagcaatgcattcaggcggtga
DBGET
integrated database retrieval system
