Oryza sativa japonica (Japanese rice) (RefSeq): 4346288
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Entry
4346288 CDS
T01015
Name
(RefSeq) peroxisome biogenesis protein 1
KO
K13338
peroxin-1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
4346288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4346288
Membrane trafficking [BR:
osa04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
4346288
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_2
AAA_14
AAA_22
Bac_DnaA
ATPase_2
AAA_5
AAA_29
DUF815
AAA_7
RNA12
IstB_IS21
NACHT
T2SSE
FtsK_SpoIIIE
Rad17
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
4346288
NCBI-ProteinID:
XP_015650573
LinkDB
All DBs
Position
8:27848939..27856233
Genome browser
AA seq
1098 aa
AA seq
DB search
MSGGGGMEVEVRVVGGARSCFAALPLHLIHALSRTSVSGDLPPVLALHLRAAATATAARW
SLAWSGAASRSSAIEVAQELAECISLPDGTVAQLSVARSLAKADSVCIEPFSEDDWEILE
SRADLAEETILTQVGVVYEGMKFPLWLDGHNIVKFVVTSSSPKKSLVQLVPGTEVAVAPK
KRRENSSQDVQKQSALKEEAQTKALLRVQAADRKYVHKFKYKGVELGVILSYAVLVHPDT
AARASISNLQLVTVSSKSSPKRLAQKGKEVTQKKGILLPKERVREVVVYILFSDSVSKGH
VMLPHSIRHYISADIHSWVYVKTFSANVKNDQPILTISPLHFKMQEKVAHDGSELGSQEA
NIWRKTSIPSENRDPFQEAHFGNNDDVLSTDVDNTSESILEHKILIKQWLVGQLKDMGLH
VGNSEISPVVLPTKVLLHFEAVDQKHNRGKEFLYLLKVGFENSSYSNSQGNAELSWSIQT
DDLENLELKFGRLELGEPEFFNSVLDDGFSNGFKLTRSSLGWMENAMSDVTKRLSVLLSS
TSLRLFDQLKLPFPGHVLVLGPRGSGKTALVRAAAKYFEDHKEILAHVIYIDCSKLTVGK
AKETKQTIEDSISEALLHAPSVILFDDMDNVVSVSSDPQAPQSSSSSDSIVRYLADIMDE
YKDKAQNACGYGPIALMASAQSLQSLPQDLTSSGRFDFHVELPVLAIPEREALLKHHVEE
HELQCSKEVLSEIASKCDGYDAYDLDILVDRAVHAAASRFVLPSSASVNCAEPTLVKEDF
LKAIHDFLPVAMRDLSKYAPADGEGGWEDVGGLNEAVTIIKETLELPSKYPNIFTKAPVR
LRSNILLYGPSGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAAAA
APCLLFFDEFESIAPQRGTQSAGVSDRVVNQFLTELDGVESLTGVFVFAATSKPQSIDAA
LLRPGRFDRLILCDFPGWHERLEILKVHSREVSLASDASLEEVASLTEGFTGADLAAILR
DAKLAAVHKVLEDRNNGISDTQPCISKELLISTAREARPSTSAEQKMQYDMDFGQFVSSR
KSVSTKARESKGKKVTLA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcggcgggatggaggtggaggtgcgggtggtgggcggcgcccggagctgc
ttcgccgcgctcccgctccacctgatccacgccctgtcccgcacctccgtctccggcgac
ctcccgccggtcctcgcgctccacctccgcgccgccgccaccgccaccgccgcccgctgg
tccctcgcctggtccggcgccgcgtcccggtccagcgccatcgaggttgctcaagagctg
gcagaatgcatctcgttgcctgatggaacagttgcacagttgagtgtagctcgctccctg
gccaaagctgattcagtctgtatagaacctttcagcgaggatgattgggagatactggag
agccgtgctgatttggctgaagaaacaatcttgactcaggttggcgttgtttacgagggt
atgaaattcccattgtggttggacggccataatattgtgaagtttgttgtgacctcatct
tctccaaagaaatcactggttcaacttgttccgggaactgaagttgctgtggcacccaaa
aaacgtagagaaaactccagccaggatgtgcaaaagcaaagtgcactgaaggaagaagct
caaacaaaggctctcctgcgtgttcaagcagcagataggaagtatgtgcataaattcaaa
tataaaggtgttgaactgggggtgattctcagctatgctgtgctggtacatccagataca
gctgcaagagcttcaatttccaatcttcagttggtcactgtttcatccaaatcatcacca
aagagacttgctcaaaaaggcaaagaagttactcaaaagaagggtattttactgcctaaa
gaaagggtccgagaagtggtagtctatatcttattctcagattcagtttccaaagggcat
gttatgcttccccactctattcgccactacataagtgcagacattcattcatgggtttat
gtgaagacattctcagctaatgtcaagaatgatcaacctatattgacaataagtccgtta
cattttaagatgcaagaaaaagttgctcatgatggtagtgaattaggaagtcaagaagcg
aacatttggaggaaaactagcatcccttcagaaaatagagatccctttcaggaagctcat
tttggtaacaatgatgatgttctgagcacagatgttgataacacttctgaatccatattg
gaacataagattctcattaaacagtggcttgttgggcaacttaaagatatgggcttacac
gttgggaactctgagataagtccagtagttttaccaaccaaagttttgctccattttgaa
gcagtagaccaaaagcataacaggggaaaagaatttctatacctgctaaaggttggcttt
gaaaattctagctacagcaattcgcaaggcaatgctgagctttcttggagcattcaaact
gatgatctagaaaacttggaattaaaatttgggaggttggagctgggtgagcctgaattt
tttaattctgtattagatgatgggttcagcaatgggttcaagctgactcgatcttcttta
ggctggatggagaatgcaatgtcagatgtcacaaaaaggctatctgttctcttatcgtca
actagtctgaggttatttgaccagctaaagctccccttccctggtcatgttcttgtcctt
ggacctcgaggttctgggaaaactgctttggttagggctgctgcaaaatactttgaagac
cataaagagatattggctcatgtaatatatatagattgttccaaacttacagtgggcaag
gctaaggagacaaagcaaacaattgaagatagcatttctgaagctctgcttcacgcacct
tcagttatcttatttgatgatatggacaatgtggtttcagtgtcttcagatcctcaagca
cctcagtcatccagttcatctgattctatagtaagatatttggctgatatcatggatgag
tacaaggataaggctcagaatgcatgtggatatggacctattgcattaatggcttcagct
caatcacttcagagtcttcctcaagatttaacttcttctgggagatttgatttccacgtt
gagcttcctgttcttgctattcctgagcgtgaggcgctattgaaacatcatgttgaggag
catgagttacagtgttctaaggaagttctttcagagatagcatcaaaatgtgatggctat
gatgcatatgacttggatattttggttgatagggctgtgcatgctgctgcctctcgcttt
gttctgccttctagcgcctctgtgaactgtgctgaaccaactctagtgaaggaagacttc
ttaaaagcgatacatgacttccttccagttgccatgcgtgatcttagcaaatatgcccct
gctgacggtgaaggtggttgggaagatgttggagggcttaatgaagcagtaaccatcatc
aaagagactcttgaattgccatcaaaatacccgaatatctttaccaaggcacctgtaagg
ttgcgatcaaacattctcctctatggaccatctggatgtggaaaaacacatattgtggga
gctgcagctgccgcttgttctctgcgattcatatcagtcaaaggtccagagctattgaat
aagtacatcggttcttctgagcaatctgttcgtgacttctttgcaaaggcagctgctgca
gcaccttgcctactgttctttgatgagtttgaatccattgcaccccagcgaggaacacag
agtgcaggagtttctgatcgtgttgttaatcaattcttgacagaactagatggtgtagaa
agcttgactggagtatttgtatttgctgcaacaagtaagccacaatcaattgatgctgca
ctcttgcggcccggaagatttgaccgtttgatcttatgtgattttcctggatggcatgag
cgtttggaaattctgaaagttcactctagagaggtttcactggcaagtgatgccagtctg
gaagaggttgcttctttgactgaaggatttacaggtgcagatcttgcagctattctaaga
gatgctaagctggcagcagtgcataaagttctggaggacagaaataatggtatctcagac
acacagccatgtatcagcaaagaactcctaatatctactgctagggaggctagaccttcg
acatcagcagaacaaaaaatgcagtatgacatggacttcggtcaatttgtatcgtctagg
aagtctgtttcaacgaaggcaagggaatctaaaggaaaaaaggtcacgctggcttga
DBGET
integrated database retrieval system
