Oryza sativa japonica (Japanese rice) (RefSeq): 4347985
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Entry
4347985 CDS
T01015
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4347985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4347985
Spliceosome [BR:
osa03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
4347985
Complex B
4347985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
4347985
NCBI-ProteinID:
XP_015614284
UniProt:
Q33BE1
Q0IZA1
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All DBs
Position
10:complement(1007650..1012940)
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AA seq
463 aa
AA seq
DB search
MGDYGSGMMRGNPDGGGMQSRTKGQRVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDFK
PPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVAE
ELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPR
GYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGE
NAEQKLSTRDQQHAGRPRSEEPRRDERRADRDREKSRERPRERDRDERTRERSHDRTRER
DSKEDRHHHRDRDRTRDRERGRDRERDHGRDRDRERDRRDRDRDRDRGRDYERDRDRGHD
RHRERGRDRERDYERASHERDRGHMHERDAEFANGEPKHDQEYGYNYEQHKSHDAYETER
SKRHEHEYYQMQPNNTEPEGPEEGEAYDEGDYQYHQAADEHNN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcgactacggcagcgggatgatgcgggggaacccggacggcggcgggatgcagtcc
cgcaccaagggccagcgcgtcaacgtgcagcagctcaagctgatggggcagggacacccg
acgggcctcacccccaacctgctcaagctcttcgagccccgcccgccgctcgacttcaag
ccgcccgtcgagaagcgcaagttgccggcctacactgggatggcgcagttcgtgtcgcag
tttgcggagcccggtgaccctgagtacgcgccacccgtccccacatgcgagaccaaggct
gaaaagaaggataggatccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaa
gagcttcagaaatatgacccacagagtgaccccaatgccactggagatccatacaaaaca
ctctttgttgcaagacttaactatgagacgtctgagcatagggtcaagcgggagtttgaa
gcttatgggcctattaaaagggtacggcttgtgaccgacaaggaaacaaataaacctaga
ggatatgcattcatcgagtatatgcacacccgggacatgaaaaatgcttacaagcaagca
gatgggagaaaagtggacaataggagggtgctagttgatgtggagcgtggtagaactgtt
ccaaattggcgtcccaggagattgggtggtggacttggatcaagcagaattggtggtgaa
aatgctgaacagaagctctccactagggatcagcagcacgctggacgcccaagatcggag
gagcctaggagagatgagcgtcgtgcagatagggaccgcgagaagtctcgtgaaaggcca
cgggaaagagatcgtgatgagagaactcgtgaacgatcccatgaccgtactcgcgagcgt
gattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagggaacga
ggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgtcgtgat
agagatagggacagggatcgtggtcgggattatgagagagaccgtgaccgtggtcatgat
cgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtcatgaacgg
gaccgtggtcacatgcatgagagagatgctgaatttgccaacggtgagccaaaacatgat
caggaatatggctataactatgagcaacacaaaagccatgatgcttatgagacggagcgc
tcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaaggc
cctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagctgctgatgag
cacaataactga
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