KEGG   Oryza sativa japonica (Japanese rice): 4348562
Entry
4348562           CDS       T01015                                 
Name
(RefSeq) probable methionine--tRNA ligase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00450  Selenocompound metabolism
osa00970  Aminoacyl-tRNA biosynthesis
osa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    4348562
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4348562
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4348562
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4348562
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     4348562
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   4348562
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    4348562
 Prokaryotic type
   Other AARSs
    4348562
SSDB
Motif
Pfam: tRNA-synt_1g Anticodon_3 tRNA-synt_1 Anticodon_1
Other DBs
NCBI-GeneID: 4348562
NCBI-ProteinID: NP_001390893
LinkDB
Position
10:join(14147071..14147327,14147743..14147896,14148030..14148185,14148272..14148502,14148597..14148740,14148885..14148975,14149167..14149273,14149383..14149497,14149682..14149800,14149908..14149973,14150070..14150198,14150288..14150431,14150513..14150617)
AA seq 605 aa
MAAAKEAVVPVEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVC
GTDEYGTATETKAMEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDI
FLKLLDNNWLSENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNS
TELVNPKCKVCGSTPCVRDTDHLFLELPLLREKLEKYIDETSLTGSWSQNAIHATNAWLK
EGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYISITACYTPEWEKWWKNPENVE
LYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDA
KSTNIPPEVWRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGT
GYGSVVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQ
ESQFWKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPEEHLSFCD
EKGEVEKAKRPWDLIPSGHRIGKPAPLFKGLENEAVKGLREKFAGSQAERKLRTQVAAQL
EATSI
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggcggcggcgaaggaggcggtggtgccggtggaggggcggaggaacgtgctggtgacg
agcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctc
tccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgc
ggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctccccc
agggagatctgcgacaagtaccatgccatccacaaggaagtgtacgagtggttcgacatc
agcttcgacatcttcggtagaacatcgtcgccgcaacagaccgaggtctgccaagacatc
ttcctcaagctactggacaacaattggctgtcagagaacacaatgcagcagctttactgc
aattcatgccaaaggttcttggctgacaggcttgtggagggctactgccccacagaggga
tgcaactatgactctgccaggggtgaccaatgcgagaagtgtggaaaattgctgaattca
actgagctggttaatcccaagtgcaaggtttgcgggagcacgccttgtgtccgcgacacg
gatcacttgttcttggagctccctctgctgagggagaaacttgagaagtatatcgacgag
acttctttgactggatcatggagccaaaacgctattcatgcaacaaatgcttggttgaag
gaagggttgaagcctcgctgcattaccagggatctgaaatggggtgtgcctgtcccacat
gagaagtacaaagacaaggtgttctatgtctggtttgatgcaccaatcgggtacatctcc
attacggcgtgctacacgcctgagtgggagaaatggtggaagaatccagaaaatgttgaa
ttgtatcagttcatgggtaaagacaatgtcccattccatacggtcatgttcccctccaca
ctacttggaactggagaaaattggactctgatgaagacgattagtgtgacagagtatctc
aattatgaatcaggaaagttctccaaaacaaagggcattggagtgtttgggaatgatgca
aaatccacaaatattcctcctgaagtgtggcgatactacttgcttaccaatcgtcccgag
gcatcagatacattgttcacttggacagatttgcaagccaagtgtaacaacgagctgctg
aacaatttagggaacttcatcaatcgagtactaagctttatcgcgaaaccagagggaact
ggatatggttctgttgtacctgattctcctgatgtggattcccatgctctgactcagtca
ttggctgagactgttggtaaattgattgatcagtacatcgatgcaatggacaaggtcaaa
ataaaacaagggctgaagattgcaatggccatttctagcgaaggaaatgcatacctacaa
gagagtcagttttggaagctttacaaacaagatccagccagttgcgcaactgtgatgaaa
acctcagttggaattgtgtacctcctggcatgtttgctggagcctttcatgccaacattc
tcaaaagatgttctgcagcagctaaatctaagtccagaagagcacctatcattttgtgat
gaaaaaggagaggttgagaaggccaaaagaccttgggatctcataccatcaggccacagg
atagggaaacctgcacctttgttcaagggattggaaaacgaagcggtgaagggcttgaga
gaaaaatttgcaggcagccaagctgaaagaaaattgaggactcaagtcgccgcacaattg
gaagccacaagcatatag

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