KEGG   Oryza sativa japonica (Japanese rice): 4349809
Entry
4349809           CDS       T01015                                 
Name
(RefSeq) signal recognition particle subunit SRP54, chloroplastic
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03060  Protein export
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    4349809
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:osa02044]
    4349809
Enzymes [BR:osa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     4349809
Secretion system [BR:osa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   4349809
  Eukaryotic Sec-SRP protein
   4349809
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA ParA cobW nSTAND3 APS_kinase CLP1_P ArsA_ATPase AAA_17 NTPase_1 6PF2K AAA_31 AAA AAA_18 ATPase MeaB AAA_16 AAA_30 AAA_33 GTP_EFTU AAA_19 KAP_NTPase ATP_bind_1 Thymidylate_kin PIF1 NPHP3_N ResIII KTI12 DUF5799 AAA_14 CBP_BcsQ GET2
Other DBs
NCBI-GeneID: 4349809
NCBI-ProteinID: XP_015617529
UniProt: Q53QG1 A0A0P0XZH8
LinkDB
Position
11:join(2563203..2563382,2563472..2563574,2563676..2563743,2563812..2563913,2564115..2564267,2564350..2564427,2564623..2564748,2565052..2565154,2565369..2565469,2565917..2566054,2566148..2566291,2566435..2566510,2566783..2566868,2566987..2567112,2567253..2567342)
AA seq 557 aa
MEATSSTTLALSSPPTAAARRSPAKAIVASHHLRHSSVPALHLRAVPGPSFRALPSPGFP
GWRRKRGSGLVVRAEMFGQLTTGLESAWNKLRGTDQLTKDNIAEPMRDIRRALLEADVSL
PVVRSFIESVTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEVSDLVFAKTAPTVILL
AGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEA
KPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTG
QEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFY
PDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSF
SRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKES
GKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKAEEQAAAGTGKRRRKY
GNLRRRDLDAMRGFRRR
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggaggccaccagtagtactacactagcgctctcctcgccgcccaccgccgccgcccgc
cgctcgccggcgaaggcgatcgtcgcctcccaccacctgcgccactcctccgtccccgcc
cttcacctccgcgcggtccccggcccctccttccgcgccctcccctcacccggcttcccg
ggatggaggaggaagaggggaagcgggctggttgtgcgggcagagatgtttgggcagctc
acgaccgggctggagtccgcgtggaacaagctgcggggaacagatcaactgacgaaggac
aacatcgctgaaccaatgcgggatatcagaagagcacttttggaggcagatgtgagtttg
ccggtagtgagaagttttattgagtccgttactgaaaaagctgtaggcactgatgtgatt
cgaggtgtcaagcctgagcaacagctggtgaaggttgtgaatgatgaacttgtacagttg
atgggtggggaggtatcagatttggtgtttgcaaaaactgccccaacagttatcctattg
gcgggtctacaaggtgttgggaaaactactgtttgtgcaaagcttgcctattatctaaag
aaaatggggaagagttgcatgctgattgctgcggatgtctacaggcctgctgccattgat
caactcactattctggggaaacaggttggggttccagtttactctgaaggaactgaagct
aaaccttcacaaattgccaagaatggcataaaggaggcaaaaagcaagaaaactgacgta
atcatagtggatactgctggaaggctgcaggtagataaagccatgatgagtgagttgaaa
gaggtaaaaagggcagtaaatcctacagaagttctacttgtggtggatgccatgactgga
caagaagctgcatcattggttagcaccttcaatgttgagattggtattactggtgctata
ctgacaaaactggatggtgattccagaggtggagcagcactaagtatcaaagaggtatct
ggaaagcccatcaagtttgtagggcgaggagaacgcatggaagatcttgagcctttctat
cctgatcgtatggcacaacgaatcttgggaatgggagatgtactttcatttgttgaaaag
gcacaggaagtgatgcgtcaagaagatgctgaggaattacagaagaagatcctgagtgca
aaatttaacttcaatgacttcttgaagcaaacacaagctatcgcacaaatgggttcattt
agtcgtataattggcatgattccaggcatgaacaaggttacccctgctcaaattcgtgaa
gcggagaaaaaccttaaatttatggagtccatgatcaacgtaatgacccctgaggaaagg
gaaagaccagagctacttgctgaatcacgcgagaggaggataagagtggccaaggaatcc
ggaaaaaacgaacgacaggtgagccaattggttgcgcagctcttccgaatgcgtgctcaa
atgcagaaaatgatgggtgctatgcaagggcaagacacccctgatatggaaggcctcatg
gattccatcaaggcagaagagcaggctgccgctggtactggaaagcgaaggagaaagtat
ggcaatctgaggcggcgagacctggatgcaatgcgcggtttccgtcgacgatga

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