Oryza sativa japonica (Japanese rice): 4352826
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Entry
4352826 CDS
T01015
Symbol
OsJ_36918, OsSPO11-4, OsSPO11D, SPO11-4
Name
(RefSeq) meiotic recombination protein SPO11-4
KO
K10878
meiotic recombination protein SPO11
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4352826 (OsJ_36918)
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
4352826 (OsJ_36918)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
nSTAND_NTPase4
Motif
Other DBs
NCBI-GeneID:
4352826
NCBI-ProteinID:
NP_001391678
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Position
12:join(27296718..27298133,27298242..27298289)
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AA seq
487 aa
AA seq
DB search
MDDSTDDDSYHPRKHYAYDRQVSSSRWRTSREYIRGPGPETHTTESAQDGQDPPAGVYSY
GYFSGSGNDPQVQGHFVPEIQKYNPYVIFKGEQLPVPIWELPEEKVQDFHDRYFIAKDKS
RVEARKTLNRLLEGNINTIERGHGYKFNIPKYTDNMEFNEEVKVSLAKAGKTISRSFCNA
NQREVASRTGYTIDLIERTLGAGLNISKRTVLYTNKDLFGDQSKSDQAINDICALTNIRR
GSLGIIAAEKGIVVGNIFLELTNGKSISCSIGVQIPHRLDQIKDVCVEIGSRNIEYILVV
EKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFLRFLKQRTGLPVFGLCDPDPEGIS
ILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNYSRLSREDKTMLKNLWQ
DDLSDVWKRRIEEMISFDKKASFEAIHSLGFDYFATNLLPDMINKVREGYVQVQEKKEPQ
DTEASED
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcaacggatgacgattcgtatcatccaagaaaacactatgcttatgatcgt
caggtttcttcaagcagatggcgtaccagccgcgagtatatcagaggtcccggccccgaa
actcatactactgagagtgctcaagatggacaggatccacctgctggagtatattcctat
ggttatttttctggcagtggtaatgatcctcaagttcaaggacactttgttccggagatt
caaaagtacaacccttacgtgattttcaaaggtgaacaactcccggttcctatatgggaa
ctgccagaggagaaggtccaagattttcatgataggtactttattgcaaaagacaagagt
cgagttgaagccaggaagactctgaataggttgttagaggggaacatcaatacaattgaa
aggggacatggatataaattcaatattccaaaatatacagataacatggagtttaatgag
gaagtcaaggtttctctagcaaaagcaggcaagaccataagccgttccttttgcaatgcg
aatcagcgggaagttgcatctaggactggctataccattgatctaatagaacggacactt
ggggctggattgaacatctcgaagagaactgtcttatacacaaacaaggatctgtttggg
gatcaaagtaaatcagatcaagcgatcaatgacatctgcgctttgacaaatatcagaagg
ggctctttgggtataatagcagctgaaaaaggaattgtagttggaaacattttcctggaa
ttgacaaatggcaaatcgattagttgttctattggagtgcagataccacacaggcttgac
cagatcaaagatgtttgtgttgaaataggttcacgcaacatagagtatattcttgttgtg
gaaaagcatacaatgttgaattatctactagagatggactatcacaccaataacaactgt
ataattctgacaggatgtggcatgccaaccctccaaacaagggatttcctcagattcttg
aaacaacgcactggactacctgtctttggactttgtgatccagatcctgaaggtataagt
attcttgctacgtatgctagagggtcttgcaattcagcatatgacaatttcaatatttcc
gtgccatctatttgttgggttggattgtcatcctcagacatgataaagttgaatttgtct
gagaccaactactcacgtttgtctcgcgaggacaaaactatgttgaagaacctttggcag
gacgatttgtccgatgtatggaaacgcagaatcgaagaaatgataagttttgacaagaag
gcctcttttgaagctattcatagtttggggtttgattattttgcaaccaatttgcttccg
gatatgattaacaaagtacgagaaggctatgttcaggttcaagagaaaaaagagcctcaa
gacactgaagccagtgaggactga
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