Octopus sinensis (East Asian common octopus): 115214859
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Entry
115214859 CDS
T07665
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K08131
collagen type IX alpha
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn04512
ECM-receptor interaction
osn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115214859
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115214859
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
osn00535
]
115214859
Proteoglycans [BR:
osn00535
]
Extracellular matrix (ECM) proteoglycans
Others
115214859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
115214859
NCBI-ProteinID:
XP_036361403
UniProt:
A0A7E6F1J1
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Position
LG8:78986071..79243717
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AA seq
1011 aa
AA seq
DB search
MVITGLPVLFIINFVQSQVFEKTDEVCPENLGAYDDIPAFDFISTYELDTRTNIPGVHQT
RGSNALQVAYKITEGSNLRIPTSALFPKGLPEQFSLISTFMMRGPTRKARWNLLKIVDPN
NRPQLGVRLNGDTKTVDFYYKSTNGRMAKLTFNRAKKLFTKSWHKLHFSVGTENVEMYID
CKLVESLTVGDQRGKIDSTGEIVLGTQEPGDRTVAFDLQWMVLHCDYRKAARETCSEIPK
SEDVDEDEDEEEEEEEEETDKEEKKPKCNIVCPRGKPGINGTDGLPGIPGINGRDGERGL
PGVPGLRGAPGPRGADGETGTIGPRGPEGRRGLRGEKGNDGLTGLPGRKGESGEKGRNGE
RGDEGTPGDPGLKGEPGAVGPRGERGQFGQKGEPGGGPSSSSGIPGRDGTDGKDGLPGQP
GPPGDKGEKGTNGRRGYGGQRGFRGLPGTAGQKGEPGRDGKDGKDGVPGIGGGDAVPGTP
GPPGPTGPSGPRGLLGLPGLKGTKGTPGLKGGRGDKGEPGEIGFPGKDGIDGPRGRDGTE
GSKGEQGTKGEVGPEGPRGLPGITGHRGSRGQTGRIGPNGLKGERGEIGPEGPPGPPGVV
SGKGDTVWKDVQMYQGPPGRPGLRGSVGPKGDMGPKGMSGDPGRIGDPGREGVMGPTGQP
GNDGKDGSKGDSGIPGIRGPQGQIGQQGPAGPIGLSGLDGRKGDPGERGPSGPVGPPGKD
GKPGIIGPPGQSGIMGPVGLPGVPGPPGPPGPVGPQGDRGDTLGVSGSDGASMAYGPQGQ
PGQNGPAGMPGERGATGEPGPTGPQGPPGIPGMPGPAGVTGPRGLRGQTGMPGMPGLPGR
SIAENEIRQLVYRILRERLEDLTADLKGPPGPMGVGKRGRPGPPGLMGTPGERGAPGPPG
ERGFVGIPGLQGPMGTLGRAGPRGEKGDRGLTGTGRIGKPGLRGRTGPPGPVGPSGVGRP
GERGLHGPPGSQGHRGAPGLPGPPGYCEYCNFAASGPEYFPLNRRNAIKGP
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggtgataactggtttaccagtcttattcataattaattttgtacaaagtcaagttttt
gaaaaaacagatgaagtatgtcctgagaatttaggagcatatgacgacataccagcattc
gattttatatccacatatgaattagacacaagaacaaatatcccaggtgtacatcaaacg
cggggtagcaacgctctacaggtggcttataaaataacagaaggatcaaatttacgtatt
cccacaagtgccttatttccaaagggattaccagaacagttctcattaatcagcactttc
atgatgagagggccaacacggaaagctagatggaatttactcaaaatcgtagatccaaat
aatcggccgcaactcggcgttagactaaacggggatacaaaaacagttgacttttactac
aaaagtacaaacggaagaatggcaaaattaactttcaatagagcgaaaaagcttttcacg
aagtcatggcataaacttcacttttctgtcgggacagaaaacgtggaaatgtatatagat
tgcaaacttgtggaatcattaacggttggagaccagcgtggtaaaatagattcgacgggt
gaaattgttctagggacccaagaaccaggagacagaactgttgcgtttgatcttcaatgg
atggttttacactgtgattaccgaaaagctgccagagagacctgtagtgagattccaaag
tcagaagatgtggatgaggatgaggatgaggaggaggaggaggaggaggaggagactgat
aaagaggagaaaaaacccaaatgtaacattgtctgtccacgaggtaaacccggtataaat
ggaactgatggacttccagggatccccggtattaatggtagggatggcgaacgaggttta
cccggagtaccaggattaagaggcgcgccaggcccacgaggagccgatggtgagacgggt
accattggccctcgtggccctgaaggacgtcggggattgagaggagagaaaggaaacgat
ggtcttactggattacctggtcgcaaaggagagtccggagaaaagggtcgaaatggagaa
cgaggcgacgagggtacacctggtgatcctggattaaagggtgaacccggagcagtcggt
ccacgtggagaaaggggccagtttggtcagaaaggtgaaccgggtggtggaccatcaagt
tcttcgggtattccaggtagagatgggactgatggaaaagatggtcttcctggacaacct
ggacctcctggagataaaggagagaaaggaaccaacggacgaagagggtatggtggacag
aggggattccgaggattgccaggtactgctggacagaaaggtgagccaggaagagacggc
aaagatggaaaagacggtgtaccgggaattggcggcggtgatgccgttccgggcacgccc
ggtcctcctggccccactggcccttctggtccacgtggtttattgggattacctggttta
aagggtaccaaaggtacacctggactgaaaggtggtcgaggtgataagggagaaccagga
gaaattggatttcccggaaaggacggaatcgatggcccacgtggcagagatggaactgag
ggatccaaaggtgaacaaggaacgaaaggtgaagttggtcctgaaggaccgagaggtcta
cctggaatcactggtcatagaggatcacgtggccagacaggaagaataggaccaaatgga
ttaaaaggtgaaagaggggaaatcggtcccgaaggtccaccaggtccaccaggtgttgtc
tccgggaagggagatacggtatggaaagacgtgcagatgtatcaaggaccacctggacgt
ccgggactgcgaggttctgtaggacccaaaggagacatggggcctaaaggaatgtcaggc
gatccaggacgaattggtgatccaggaagagagggagttatgggaccaaccggtcagcca
ggaaatgacggcaaagacggttctaaaggagattctggtattcctggaatcagaggacca
caaggacaaattggacagcaaggaccagcaggccctattggattatctggacttgatggg
agaaagggtgatcctggtgagcgcggaccaagtggccccgtcggaccacctggcaaagat
ggcaagccgggcataattggtccaccaggacaatcgggtataatgggacctgttggccta
ccaggtgtccctggaccacctggacctcccgggccggtaggaccacaaggagaccgtgga
gatacattaggtgtttcaggatcagatggcgcatcaatggcttacggaccccagggtcag
cctggacaaaatggccccgctggaatgcctggtgagagaggagctactggtgagcctggg
cctacaggaccccaaggaccccctggtataccaggaatgccaggacctgcaggtgttact
ggaccaagaggacttcggggacaaacaggaatgcctggcatgccaggactaccgggtcga
agcattgcagaaaatgagatacgtcaacttgtttaccgaattctaagagaacgtcttgaa
gacttaacagctgatcttaaaggacccccaggaccaatgggtgtagggaaaagaggtcga
ccaggtccacctggattgatgggtaccccaggtgaacgtggtgctcctggacccccaggt
gaacgaggatttgtaggaatcccaggtcttcaagggcccatgggtacattagggcgtgct
ggtcccaggggagaaaagggtgacagaggtcttactggcactggtagaattggcaaacct
ggtttaagaggaagaacaggtcctcctggaccagttggtccttccggtgttggtcgccct
ggagaaagaggtttacatggacctccaggatctcaaggtcatagaggagccccaggtctg
cctggtcctcctggatattgtgaatattgtaactttgctgcatcaggccctgaatatttc
ccattaaatagaaggaatgctatcaagggaccttga
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