Octopus sinensis (East Asian common octopus): 115217443
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Entry
115217443 CDS
T07665
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03440
Homologous recombination
osn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115217443
03450 Non-homologous end-joining
115217443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osn03032
]
115217443
03400 DNA repair and recombination proteins [BR:
osn03400
]
115217443
DNA replication proteins [BR:
osn03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
115217443
DNA repair and recombination proteins [BR:
osn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
115217443
BRCA1-C complex
115217443
NHEJ (non-homologous end-joining)
MRX complex
115217443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_15
AAA_21
AAA_29
Seryl_tRNA_N
AAA_16
ABC_tran
AAA_13
Motif
Other DBs
NCBI-GeneID:
115217443
NCBI-ProteinID:
XP_029643007
UniProt:
A0A6P7SXV9
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All DBs
Position
LG1:89309649..89390271
Genome browser
AA seq
1322 aa
AA seq
DB search
MSTIKKMSIQGIRSFGPEDSDKQVISFFCPLTLILGQNGTGKTTIIESLKYITTGDLPPG
SKTNGAFVHDPKIAHEKEVKAQVKLHFKDIIQKDVIVSRAMTGTQKAKKVETRTLDGVIT
RRSTDGDKSLTQKCAEINREMIISLGVSKAVLENVIFCHQEEANWPLSEGKVLKEKFDAI
FASTRYVKALESIRKYKQVQDGSIKEKKTDLKYLKEHKEKVTQLENNKSELESKYAASKD
SVKKMMEELEPIKEKIHSINVRSEEMYKLKNDIEVVRTERKQLQISVEELRKNIETEFEG
STAELQTMINKFEDNLQEKEDSLSEFNKKLDKLANENEGYEQEKSILLVEIGKLDQEATN
NEENIQARADLVMRLATKYNIDDFDKNTIDNKTTKNFIEMLNNTHQQLMSDVKIEKKRFE
EKEQSIQQEMDGVKEKKVQLEQRIKMEEEITKKNIAEIQKCEYALQQMESSARYRDEISA
DLKSAQKSLKATEESINVAELKKEIQNMSQEKKTLEEQYDELDGLLKKMHQHSTVQTQIS
MLDKEKTAKEEQIKKCKSRHETSIIHLLGEMPRNDLRGTLDEYVSKQSNNVQKSTEKLDK
LRQDLSSKETQKRMLLEEMRKRENELKKLEEKLQDACGEDTFEDSLQSIQLKLTQVQDQR
GSLMGSEHFFKKFVVDLKKDSPCCPLCHRGFEQEQEIRELILELENKLRMVPSKLHKSER
ELEQYQKEYDTLQQLKPIKENLTLLSTTDLPDIKNKLDSVNNAIVKLNKSIQEAEEDQQD
LMSDESLGKSILPDILMIDRYLAEVKELNKKSRIQKSLISDVDMDSLGDRSLEDVSSEKD
TIQSKLRSTNHELELQRQKLSNYSDKVNELHSRVNSLNSEKLQIEKNLQEKIKLEENKDD
LHNQNVTHKASIKKLKEELKPLQASIDKLVDEKDSITTCKEDTLEKRRKQAEEIQQKGVS
QLKSYMSIILNYEKSGKAALLEEKKERCKSLNDKVERITNKRNQLQDSVSKIRKELSKEK
MRKRELDDTFLLREKEKDIEKLQDKVEILKKKLGDYGDSSLAEQLRSLKKKQEKLDREKD
IAVGRQDGFQVHIASINEELASDMYKNAFQRYQQTLIDLRTTEMANLDLQKYYAALDVAI
MKYHNLKMKEINKIIRDLWRNTYRGNDIETIEIRSSEDESGIMKSRRNYNYHVVMIKGDA
VIDMRGRCSAGQKVLASIVIRLALAETFCINCGILTLDEPTTNLDQENIESLANALVDII
KSRQEQQNFQLVIITHDENFVQILGRLDVKEYYRVKKNENGCSRIKRVSVWRVDSDGDND
LH
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaataaaaaagatgagtatccaagggatacgtagttttggccctgaagatagt
gataaacaagtcatatctttcttctgccctttgactttgatattaggacagaatggaact
ggtaaaacaactattatagaatctttgaaatatattacaacaggtgacttaccacctgga
tctaaaacaaatggtgcttttgtccatgatccaaagattgcccatgagaaagaagttaaa
gcacaagtcaagttacatttcaaagacattattcagaaagatgttattgtatcacgagca
atgacaggaacacaaaaggctaaaaaagttgaaacgcgaactttagatggtgttataaca
agaagatcaactgatggagacaagagcctcactcagaaatgtgctgaaataaatagagaa
atgattatttctttgggtgtctcaaaagcagtattagaaaatgtcattttctgtcaccaa
gaagaggctaactggccactgagtgaaggaaaagttttaaaagagaaatttgatgctata
tttgcttcaactcgctatgtcaaagccttagaatcaattcgtaaatataaacaagtacaa
gatggttccataaaagaaaagaaaacggatctaaagtatctgaaagaacacaaagaaaaa
gtcacacaattagaaaataacaaatcagaactggaaagtaagtatgcagcttccaaggat
tcggtgaagaaaatgatggaagagctagaaccaattaaagagaaaatccatagcatcaat
gtacgctctgaagaaatgtacaaactaaagaatgacattgaggttgtccgaactgaaaga
aagcagttacagatatctgttgaggaattaagaaaaaatattgaaactgaatttgaagga
agcactgctgagttgcagacaatgataaataaatttgaagacaacttgcaagaaaaagaa
gactctctttcagagtttaataagaaactcgacaaacttgcaaatgagaatgaaggttat
gaacaagaaaaatccattttgttggtagagattggcaaactggaccaagaagctacaaac
aatgaagaaaatatacaagcccgtgcagatttggtaatgcgtctggctacaaaatataat
attgatgactttgataagaataccatagacaacaagaccacaaaaaattttatagagatg
ttgaataacacccatcaacaattgatgtctgatgtcaaaatagaaaagaaaagatttgaa
gagaaggagcaaagtatacagcaagaaatggatggggttaaagaaaaaaaggttcaactt
gaacagagaattaagatggaagaagaaataacgaaaaagaacatagcagaaattcaaaaa
tgtgagtatgccctgcaacaaatggaaagttctgccagataccgtgatgaaatctctgct
gatttgaaatctgctcaaaagtcattgaaagctactgaggaatccatcaatgttgctgaa
ctaaagaaagaaattcagaatatgtctcaggagaagaaaactctggaagaacaatatgat
gaacttgatggtcttctaaaaaagatgcatcaacattctactgtacagactcagatcagt
atgttagacaaagagaaaactgcaaaagaagaacaaattaaaaaatgtaaatcacgccat
gaaaccagcattattcatcttttgggagaaatgccacgtaatgatctccgtggaactttg
gatgaatatgtgagcaaacagtcaaataatgttcaaaagtcaactgaaaagttggataaa
ttaaggcaagacctgtccagtaaagaaactcagaagagaatgctcttagaagagatgcgg
aaaagagagaatgaattaaaaaagctggaagaaaagctgcaagatgcttgtggagaggac
acttttgaagatagcttacagagcatacagctaaagctcactcaagtgcaagaccaacgt
gggtctttaatgggttcagaacattttttcaagaaatttgttgttgacctgaagaaagat
agtccatgttgtccattatgtcatcgaggctttgaacaggagcaagaaattcgggaatta
atattagagcttgagaataaattacggatggtcccatctaaactgcataaaagtgaaaga
gaacttgaacaataccagaaagaatatgacactctacaacagttgaaaccaattaaggaa
aatctgactcttctttctacaactgatctacctgacattaaaaataaattagacagtgtc
aacaatgccattgtgaaactgaacaaaagtattcaagaggcagaagaagaccagcaagac
cttatgagtgatgagtccttgggtaaaagtatcctgcccgacatcctcatgattgatcgc
tatcttgctgaagtgaaagaactcaacaagaagtcaaggatccagaaatcattgatatct
gatgtagatatggattcccttggtgatcgcagtcttgaggatgtgtctagtgaaaaagac
accatacagtccaagttgcgttccactaatcatgagttggagcttcaacgacaaaaactt
agcaattattctgataaagtgaacgaactgcacagtcgggttaattcattaaattcagag
aaactgcagattgaaaagaaccttcaagagaagataaagcttgaggagaacaaggatgat
ttacataatcagaacgtgactcataaggcttcgataaagaaactcaaagaagaattgaaa
cctctacaggctagcatagacaagttagttgatgaaaaggattctataaccacatgcaaa
gaagacacacttgagaaaagaagaaagcaggctgaagaaatccaacagaagggtgtcagt
cagttaaaaagctacatgtcaattattctcaattatgagaaatccggtaaggctgcactt
ttggaagagaagaaggagagatgtaagagtctgaatgacaaagttgagcggatcaccaat
aaaagaaaccaattacaagatagtgtgtctaaaatcaggaaagaattgtcaaaagagaag
atgaggaagcgggaacttgatgatacttttctgttacgtgagaaagagaaagacattgag
aaattgcaagataaagtagaaattcttaagaagaaactcggtgattatggtgacagcagt
ttagctgaacagcttcgctcattgaagaaaaagcaggaaaaacttgacagggagaaagac
attgctgtaggacgccaagatggctttcaagtacacattgcttcaatcaatgaagaactt
gcatctgacatgtacaaaaatgctttccaaagatatcagcaaacattaattgacttacgg
accactgaaatggccaacttagatttacagaaatattacgcggctcttgatgttgccatc
atgaagtaccataacttgaagatgaaagagatcaacaaaatcatccgagatctttggaga
aacacatatagaggaaatgatatagaaactattgagatccgctctagtgaggatgaaagc
ggaatcatgaagagtcgacgtaattataactatcatgtggtcatgattaaaggagatgca
gttattgacatgaggggaagatgcagtgcaggccagaaggttcttgcttcaatagtaatc
cggttggctctggctgagacattctgtatcaattgtggcattcttactttagacgaacct
acaactaatttggaccaagaaaatattgaaagtttggctaatgctttggtggatatcatc
aaaagccgacaagaacaacaaaatttccagctggtaattattacccatgatgagaacttt
gtgcagatacttggtcgtttggatgttaaggaatattatcgagtgaaaaagaacgagaat
ggatgttctcgaatcaaacgtgtatctgtgtggagagttgactcagatggagacaatgac
cttcattag
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integrated database retrieval system
