Ostreococcus tauri: OT_ostta03g01780
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Entry
OT_ostta03g01780 CDS
T01358
Name
(RefSeq) DNA topoisomerase, type IIA, conserved site
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ota03032
]
OT_ostta03g01780
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta03g01780
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OT_ostta03g01780
DNA replication proteins [BR:
ota03032
]
Prokaryotic type
DNA Topoisomerases
OT_ostta03g01780
DNA repair and recombination proteins [BR:
ota03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OT_ostta03g01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
GyrB_hook
HATPase_c_3
UFD1
Motif
Other DBs
NCBI-GeneID:
9833718
NCBI-ProteinID:
XP_022838468
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All DBs
Position
3:296994..299075
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AA seq
693 aa
AA seq
DB search
MTTTTAGGGAGTEGGANVSGWTRARRVERANARGDVRARAVSSSAASAGRESGEYDAGSI
QVLQGLEPVRKRPGMYIGSTSTKGLHHLVWEVLDNSVDEVQAGHASHVQVTVDDDGFVTV
MDDGRGIPTDVHPVTGKSSLETVLTILHAGGKFGGDSSGYHVSGGLHGVGISVVNALSEL
VEVTVWRNGNEYTQSFSRGIATGNMKEKQQDGSGNKKGTMVRFKPDDQIFDKVKFDNNII
RTRMKELAFLNKGTELHLKTFNTKTKSYVEEKLVYAEGLKDYVLDLTADATRLHEPITFS
GEMEGIRVEGSLCWTADSYSDTLLGYANSIRTIDGGTHIDGLKYSLTKTINNASRKAKLL
KDADSNLGGDHVREGLSGVIAVWVPEPEFEGQTKTRLGNSEVRRIVENIASDAVMGHFEF
NSADLKAVFAKAQSAFKAAEAAKRARELVRRKTVLTANRLPGKLSDCSSSDADRTEIFLV
EGDSAGGSCKQGRDRSFQAVLPLRGKIMNVERKLDAAALYKNTEITNMISALGLGTMGED
LDTSALRYSKIIILTDADVDGAHIRTLLLTFLYRYQRDLFEKGFVYAAVPPLYKVAVGKK
ETYCYDDDDLQRVLAALPEGANKHIQRFKGLGEMMPEQLWSTTLDPKTRLLKRLTVDDAS
AANHMFSTLMSKEVDPRRRLIEEEGAALASIDF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgacggctggggggggcgcggggacggagggaggcgcgaacgtgagtgga
tggacgcgcgcgcggcgggtcgagcgggcgaacgcgagaggagacgtaagagcgcgggcg
gtgagctcgagcgcggcgtcggcgggacgtgagagcggcgagtacgacgccggatcgatt
caggtgcttcaaggactcgaacccgttcgtaagcggccggggatgtacatcgggagcacg
tctacgaaaggtttgcatcatctggtgtgggaagtactggacaactccgtggacgaagtc
caggcggggcacgcgagtcacgttcaggtgaccgtggatgatgatggattcgtcaccgtt
atggacgacggtcgcgggatcccaacggacgtccatccggtcaccggtaagagctcgttg
gagactgtgctgacaattttgcacgcgggtggcaaattcgggggcgatagcagcggctat
cacgtctccggtggccttcacggcgtcggtatctccgtcgtgaacgctctgtccgagctt
gttgaggtcacggtgtggcgtaacgggaacgaatacactcagagcttttcgagaggcatt
gccacaggaaacatgaaagaaaaacaacaggacggctctgggaacaagaaggggacgatg
gtacgcttcaagcccgacgaccaaatcttcgacaaagttaagttcgataacaatatcata
cgaacgagaatgaaagagttggccttcctgaacaagggcacggagcttcacctgaaaaca
ttcaataccaagaccaagtcttacgtcgaggagaaactggtctacgctgaaggtttgaag
gactacgtgttagatctcacggcggacgcgacgcgcttacacgaacccattactttttcg
ggagagatggagggcatacgcgtcgaagggtcgctgtgctggactgctgactcctactcc
gacactctgttgggttacgcaaacagcattcgaacgatcgatggtggtactcacatcgat
ggtctgaagtactctctcacgaaaacgataaataacgctagtcgcaaggcgaagttactg
aaagatgcagattctaatctgggtggcgatcatgtccgcgagggcttgtcgggtgtcatt
gccgtttgggtgccagagccggagtttgagggtcaaacaaagacgcgtcttggcaatagc
gaggttcgtcggatagttgagaacattgcgagcgatgccgtcatggggcacttcgagttc
aatagcgccgacttaaaggctgtttttgcgaaggcacagtctgctttcaaagctgctgag
gctgcaaagcgtgcgagagagcttgttcgacgcaaaactgtactgactgccaatcgattg
ccgggcaaactgtctgattgctcgtcctctgacgcggatcgcaccgaaatctttttggtt
gagggtgactcagcgggtggtagctgcaagcagggtcgcgatcgatctttccaggccgta
ttaccgctgcgcggtaagatcatgaacgtcgagcgcaagctcgatgccgcggcgctttac
aagaatactgaaatcaccaatatgatttctgccttgggtctcggtactatgggcgaagat
ctggacaccagcgcgcttcggtactccaagattatcatattgactgatgccgacgtcgat
ggtgcacacatccgtacactgctgttgacgtttttgtaccgttatcagcgggacttattt
gaaaagggcttcgtatacgccgctgttccgcctctttataaggttgccgtcggaaagaag
gaaacgtactgctacgacgacgacgatctccagcgcgtgcttgctgctttgccagagggg
gcgaacaagcatattcagcgcttcaaaggtcttggtgaaatgatgccggagcaactttgg
tcgacgacgttggatccgaaaactcgcctcttgaagcgtttaactgtagacgacgcttca
gcggctaatcacatgttctccactctcatgtcgaaggaagtcgatccgagaaggaggctc
attgaagaggaaggggctgcgctcgcctcgatagacttttag
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