Ostreococcus tauri: OT_ostta07g03560
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Entry
OT_ostta07g03560 CDS
T01358
Name
(RefSeq) Tetratricopeptide repeat-containing domain
KO
K12869
crooked neck
Organism
ota
Ostreococcus tauri
Pathway
ota03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OT_ostta07g03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ota03041
]
OT_ostta07g03560
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta07g03560
Spliceosome [BR:
ota03041
]
Complex B
Other components
Prp19-related factors
OT_ostta07g03560
Complex C
OT_ostta07g03560
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
OT_ostta07g03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
Suf
HAT
TPR_19
TPR_16
TPR_CcmH_CycH
HAT_Syf1_M
TPR_2
BSD
SoxA-TsdA_cyt-c
Motif
Other DBs
NCBI-GeneID:
9836654
NCBI-ProteinID:
XP_003080445
OrcAE:
OT_ostta07g03560
UniProt:
A0A090M9I4
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All DBs
Position
7:complement(575399..577483)
Genome browser
AA seq
694 aa
AA seq
DB search
MSNAPKTTRVKNKAPAPVQITAEQIVREANERSEDVYAAPKRKIADQEELNEYRYEQRKY
YEDRCRSAYHETRSWTKYARWEEGQGDIPRARSVWERALEHHGREVAIWLNYAEMEMRNK
AVNHARNVLERACATLPRVDALWYKYVNMEEALGQVAAARQVFEKWMKWEPEHTAWHAYV
KMEVRFGETERVRDIFQRYVQVHPDVKAWTRWAKFEFSSGNRTKAREVYEAAVEFLRNEK
DVGEIYASFAKFEEMCHEVERARAIYKFALDNLPKEQAEVVYKEFMKFEKMHGDRDGIED
VVVSQRRFKYEEEVSKNSLNYDTWFDYIRLEESAGDVAKTREVYERAIANVPPANEKRFW
QRYIYLWINYALYEELEARDAERTREVYRACLKVIPHAEFSFSKIWIMAAKFELREKRLD
AARKIFGLAIGLAPKEKIFATYIDIEFQLGNVDRCRTLHEKHLEIEPQNCSTWIKYADLE
RSLGEVERARAIFELAVGQSMLDMPEVLWKAYIDFETSEGERERTRALYERLLERTKHVK
VWMSYARFEATPIVVVEDDADEEAIALATAAAEQDENERLESRQAKSRAVYERALGEIKE
SDPDAKEERVMLLESWKSFEDTLPSEFSKSADVKAKFPRRVKRKRAVTDDDGRTVAQEEY
YDYIFPDDAGAGQPNLKLLEAAYAWKKQKAAGGT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcaccgaagacgacgcgggtgaagaacaaggcgccggcgccggtgcaaatc
acggcggaacagatcgtgcgcgaggcgaacgagcgctcggaggatgtctacgcggcgccg
aaacggaagatcgcggaccaggaggagctgaacgagtaccggtacgaacagcggaagtat
tatgaggatcggtgtcgatcggcgtatcacgagacgcggtcgtggacgaagtacgcgcga
tgggaggagggacaaggggacatcccgcgcgcgagaagcgtgtgggagcgggcgctggag
catcacgggcgagaggtggcgatatggttgaattacgcggagatggagatgcgtaataag
gctgtgaatcacgcgcggaacgtactggaacgggcgtgcgcgacgttgccgagggtggac
gcgttgtggtacaagtacgtgaacatggaggaggcgctcgggcaggttgcggcggcgcgg
caggttttcgagaagtggatgaaatgggagcccgaacacacggcttggcacgcgtatgtg
aagatggaagtgcgatttggggagacggagcgtgtgagggatatttttcagcggtacgtg
caggtgcacccggacgtcaaggcgtggacgcgctgggccaagtttgagttctcctcgggg
aatcgcacaaaggcgcgagaggtttacgaggccgcggtggagttcttgcgaaacgaaaag
gacgttggggagatctacgccagctttgccaagtttgaggagatgtgtcatgaggtcgag
cgtgcgcgggcaatttacaagtttgccctggacaatctgccgaaggaacaggcggaggtc
gtatacaaggaattcatgaagtttgaaaagatgcacggcgatcgtgatggcatcgaagac
gtcgtcgtgagccagcgtcgttttaaatacgaggaggaggtgtcgaaaaattcgctcaat
tacgacacgtggttcgattacattaggttggaggagagtgctggcgacgtggcaaagacg
agagaggtgtacgagcgagcgattgcgaacgtgcctccagcgaacgagaagcgattttgg
cagcggtacatttatctgtggatcaactacgcgctatacgaagaactcgaggctcgagat
gccgagcgcacgcgcgaggtgtacagagcctgcctcaaggtgattccgcacgccgagttc
tccttctcgaagatttggatcatggccgccaagtttgagcttcgagaaaagcgcctcgac
gccgctcgtaagatttttggcttggcaataggtttagcacccaaggaaaagatcttcgcg
acgtacatcgacatcgagttccagctcggaaatgtcgacagatgtcgaacgcttcacgag
aaacacctcgagatcgagcctcaaaactgctcgacatggatcaagtacgccgatcttgag
cgttcgcttggagaagtcgaacgagcgagagcgattttcgagctcgccgtgggtcagagc
atgttagacatgccggaggtgttgtggaaggcgtacatcgacttcgagacctccgaggga
gagcgcgagcgcacgcgcgccttgtacgagagactgctcgagcgcacgaagcacgtcaag
gtttggatgtcctatgcgcgcttcgaggcgacgccaatcgtcgtcgtcgaggacgatgcc
gacgaggaagccatcgcgctcgcgacggcggcagcggagcaagatgaaaacgagcgtctc
gaatcgcgccaggcgaaaagtcgcgccgtgtacgagcgcgcgctcggcgagatcaaggag
agtgatcctgacgccaaggaagaacgcgtgatgctcctcgagtcgtggaaatcgttcgag
gacacgcttccttctgagttttccaaatccgccgacgtcaaagccaagttcccgcggcgc
gtcaagcgcaagcgcgccgtcaccgacgatgacggccgcacggtcgctcaggaggagtat
tacgactacatcttccccgacgacgccggagctgggcaaccgaacctcaagcttcttgag
gcggcgtacgcgtggaagaaacaaaaggctgcgggcgggacgtga
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