Ostreococcus tauri: OT_ostta15g01360
Help
Entry
OT_ostta15g01360 CDS
T01358
Name
(RefSeq) TFIIH subunit TTDA/Tfb5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
ota
Ostreococcus tauri
Pathway
ota03022
Basal transcription factors
ota03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OT_ostta15g01360
09124 Replication and repair
03420 Nucleotide excision repair
OT_ostta15g01360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta15g01360
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta15g01360
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OT_ostta15g01360
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OT_ostta15g01360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
9830861
NCBI-ProteinID:
XP_003083281
OrcAE:
OT_ostta15g01360
UniProt:
Q00V71
LinkDB
All DBs
Position
15:complement(234862..235089)
Genome browser
AA seq
75 aa
AA seq
DB search
MVSAVHGVMLTTDVPIKQYVLHLDAIAPAEGKFVIADLDERRVLIQPERAEQVKREIERY
QQTTQYVAPNAMSKQ
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgccgtccacggcgtcatgctcaccaccgacgtcccgatcaagcagtacgtt
ctccacctcgacgccatcgcccccgccgagggcaagttcgtcatcgccgacctggacgag
cgcagagtgttgattcaaccggagcgcgcggagcaagtcaagcgagagatcgagcggtac
caacagacgacgcaatacgtcgcgccgaacgcgatgagcaagcagtga
DBGET
integrated database retrieval system