KEGG   Ostreococcus tauri: OT_ostta15g01360
Entry
OT_ostta15g01360  CDS       T01358                                 
Name
(RefSeq) TFIIH subunit TTDA/Tfb5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
ota  Ostreococcus tauri
Pathway
ota03022  Basal transcription factors
ota03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OT_ostta15g01360
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta15g01360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta15g01360
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta15g01360
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     OT_ostta15g01360
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     OT_ostta15g01360
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 9830861
NCBI-ProteinID: XP_003083281
OrcAE: OT_ostta15g01360
UniProt: Q00V71
LinkDB
Position
15:complement(234862..235089)
AA seq 75 aa
MVSAVHGVMLTTDVPIKQYVLHLDAIAPAEGKFVIADLDERRVLIQPERAEQVKREIERY
QQTTQYVAPNAMSKQ
NT seq 228 nt   +upstreamnt  +downstreamnt
atggtctccgccgtccacggcgtcatgctcaccaccgacgtcccgatcaagcagtacgtt
ctccacctcgacgccatcgcccccgccgagggcaagttcgtcatcgccgacctggacgag
cgcagagtgttgattcaaccggagcgcgcggagcaagtcaagcgagagatcgagcggtac
caacagacgacgcaatacgtcgcgccgaacgcgatgagcaagcagtga

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