Onychostruthus taczanowskii (white-rumped snowfinch): 121334085
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Entry
121334085 CDS
T07590
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121334085 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otc03019
]
121334085 (CNOT1)
Messenger RNA biogenesis [BR:
otc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121334085 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121334085 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
121334085
NCBI-ProteinID:
XP_041256916
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGSQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITMAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQDLVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQVQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRALAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
ccggaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcgtacgccattgacaatcccttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctggctttactgaactctttcagctcagat
ctgcgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctctttgggcagaagggagcctttggggtaggacag
gagcagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtgcaagtgtcgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggctcgaact
cattcaggactgacggatggaattccattacaatctatttcggctcctggcagtgggatt
tggagtgatggcaaagacaagagtgatggaagccaagcccatacctggaatgtggaggtc
ttgattgatgttcttaaagagctgaaccctagcctggacttcaaagtagtgacatatgaa
ttggaccatccaggatttcagattcgtgatagcaagggcctgcatattgtagtttttggc
atccagagagggcttggcatggaggtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcatccaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgccatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgagtctctgttacgattg
gcagaagtggggcagtatgaacaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgctggtattggccttactgcagatcaacacgtcctggcacaccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactcagccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcaattcgtcagcttatcatgcat
gccatggcagaatggtacatgagaggggagcaatatgaccaggcaaaattgtcacggatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggaacctttcatccaggcctgtatgactttctta
aagagaagatgtccatctatcctgggcggccttgctccagaaaaggatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcctgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagcaaactgcagtaatgtg
atgaacaaggctcggcagcccccacctggagtcatgcccaaaggacgcccgcccagcgcc
agcagcttggatgccatctctcctgtgcagatcgactcgcttgcaggaatggcctctctt
agtttaggtggctcagctgctcctcacacccagagcatgcaaggcttccctccaaacttg
ggctctgcgttcagcactcctcagtcaccagcaaaagcgttcccgcctctttccacccaa
aaccagacaaccggtttcagtggcatcggaggactttcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaactggagctctgggccttcctgcggtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccatccacca
catccaaccatgtccgtggatgaggtcttggaaatgctgcagagatttaaggactccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaatttgtttgaggaatatcgt
ttctttccccagtacccagacaaagagctgcacataactgcctgtctcttcgggggcatc
atagagaaaggactggttacttacatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccacatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaggttccagcaaaagctcctcttgctggccaagtcagcactatagtg
accacctcaaccaccaccaccgttgcaaaaaccattacgatcacccgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaatactaccaacattgatacgctgttagta
gcaacagatcaaacagagaggattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggtggaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtgatgaaaagagtcagt
attgagcctaactttcacagcttatattcaaacttccttgacacacttaagaatccagag
tttaataaaatggttctaaatgaaacctacagaaatatcaaggtgctattgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcactggctggga
atgataacgatggctaaaaataagcccatcttgcacacggatttggatgtgaagtcacta
ctactggaagcatacgtaaagggacagcaggaattgctttatgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaatccgtggacaatg
gccattatgaatgttttagctgagctacatcaggaacatgatctaaaattgaatctcaag
tttgagattgaggtgctctgcaagaatcttgcactggacatcaatgagctgaaacctgga
agtctcctgaaagacaaggaccgtctgaaaaatctggatgagcagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacaaccactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttaccat
gacatcaacgtctattctctgggagggttggctccacacattaccttaaatccaacgatc
ccgctgttccaagcgcacccgcagctgaagcagtgtgtgcggcaggccatcgagcgtgca
gtgcaggacctcgtccatcccgtggtggacagatccatcaagattgccatgacaacctgt
gagcagatagtcaggaaggacttcgccctggattccgaggagtcccggatgcgtgtggcc
gctcaccacatgatgaggaacctgactgctgggatggccatgattacctgcagggagcct
ttgctgatgagcatagctaccaacttgaaaaatagctttgctactgcgctgagggcagcc
tccccacagcagagggacatgatggagcaggcagctgcccagttagcacaggataactgt
gagcttgcctgctgctttatccagaagacagctgtggaaaaggcaggccctgagatggac
aagaggctcgcaactgaatttgagctcagaaagcatgctaggcaagaggggcgtcgctac
tgcgatcccgttgtgttaacgtaccaggccgagcggatgccagagcagatcaggttaaag
gttggaggtgtggacccgaaacagctggctgtttatgaggagtttgcacgcaatgtccct
ggcttcttgcccaccaatgacttaactcagcctacaggattcttggctcagcctatgaag
caagcttgggctacagatgatgtagcacaaatttatgacaaatgtatgacagagctggag
cagcacctgcaatccattccacacaccctggccatgaatcctcaagttcaagcactgcgt
agcctcctggaggccgtggtggtggctcggaactcccgggatgctattgctgcactggga
ctgctgcagaaggctgtagagggcttgctggatgccaccagtggggctgatgctgacctc
ctgctccgctatcgtgagtgtcacctgctggtgctgaaggctctgcaggatggccgtgcc
tatggctctccgtggtgcaacaaacaaatcactaggtgcctgattgaatgcagagacgag
tacaagtacaacgtggaagctgtggagctgctaatccgcaatcaccttgtgaacatgcag
cagtatgaccttcacttggctcagtccatggagaatggcttgaactacatggctgtggca
tttgccatgcagttggtaaagatcttgttggtggatgagagaagtgttgcccatgtaaca
gaagcagatctgtttcacaccattgagacactcatgagaattaatgctcattccagagga
aacgccccggaagggttacctcagctgatggaagtggtccgatcaaactatgaagcaatg
attgaccgtgctcatggaggtcctaatttcatgatgcattcaggaatttcccaagcttct
gagtatgatgacccaccaggcctgagagagaaggcagaatacctgctgagggagtgggtg
aacctctaccattcagctgcagcaggccgtgacagtaccaaagcattctctgcgtttgtt
ggacagatgcaccagcaggggatcctgaaaacagatgacctgatcacccgtttcttccgt
ctctgcaccgaaatgtgtgttgagatcagctaccgagccctggccgagcagcagcacaac
cctgcagccaaccccaccatgattcgagccaagtgctaccacaacctggatgcctttgtg
cgactcattgcgctgctggtgaagcactctggggaggcaaccaacacagtcacaaagatc
aacctcctgaataaggttcttggtattgtggtgggagttcttctgcaagaccatgatgtt
cggcagagtgagtttcagcaacttccttaccatcgcattttcatcatgttgctgttggaa
ttaaatgctcctgagcatgtgctggagaccatcaacttccagacactcacagctttctgt
aacacatttcacatcctgaggcctacaaaagctccaggttttgtttatgcctggctggaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaagggt
tggcctatgtatgcccagttattgatcgatctattcaagtacttggctcctttccttaga
aatgtggaactcaccaaacctatgcaaattctttataagggcactctgcgtgtgttgctg
gtcttgttgcatgatttcccagaatttctttgtgactaccactatgggttctgtgatgtg
atcccacctaactgtattcagctaaggaatctgatcctgagtgccttcccacggaacatg
aggcttccagaccctttcacccccaacctaaaggtggacatgttaagtgagattaatatt
gctccacgaatactcacaaatttcactggagtgatgccacctcagttcaagaaagatttg
gattcctatctcaaaacccgttctccagtcacctttttgtctgacttgcgaagcaaccta
caagtatcaaatgaacctggcaaccgctacaacatccagctgattaatgcactggtgctc
tacgtaggtactcaagctattgcacacattcacaacaaaggcagcacaccctccatgagc
accattacccactcagctcacatggacatcttccagaatttggcagtagatctggatact
gaaggccggtacctcttcctgaacgccatcgccaaccagctgcggtaccccaacagtcac
acccactacttcagctgcaccatgctctacctgtttgcagaggccaacacagaggccatc
caggagcagatcaccagggttctcttggaacgactgattgtaaataggcctcatccctgg
ggtctccttattacattcattgagctgataaaaaatccagcctttaagttctggaaccat
gagtttgttcactgtgctccagaaattgagaagttgttccagtcggttgcacagtgctgc
atggggcagaagcaggcccagcaagttatggaagggactggtgccagttag
DBGET
integrated database retrieval system
