Onychostruthus taczanowskii (white-rumped snowfinch): 121335155
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Entry
121335155 CDS
T07590
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121335155 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otc03021
]
121335155 (POLR1A)
Enzymes [BR:
otc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121335155 (POLR1A)
Transcription machinery [BR:
otc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
121335155 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
Motif
Other DBs
NCBI-GeneID:
121335155
NCBI-ProteinID:
XP_041258931
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPAVNGLYDLALGPPDS
REVCATCMQNFSNCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLL
LSQLKVLQKGLLHAVHDLEIVLNRFVEQCADATGSEIEEELNRHVQEMLQSSQIRDRCSN
VKNVCECRNKLISQFWKAHMASKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKSGEEGI
LDETAGIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHDSSGFSPDMFFL
DLLVVPPSRYRPVNRLGDRLFTNGQTVNLQAVMKDAQLIRKLLVFMAKEQCQPIKFTEEI
QTETGEDSEPLDRSVLTTIPGQSIADKLYNAWIRLQSHVNIVFDSDMDKLITEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCR
HIRNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAITDKQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRG
LTDKKGRIKTFPPAIMKPQRLWTGKQVVSTLLINIIPDNHAPLNLTGKAKIGGRAWVKGP
AKGCLNLDSMCESQVIIKDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKREADHKRKKIIERSRQSGIEAVRAALNLPETASCEEV
QGKWQDAHLCKDQRDFNMVDMKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIRPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQNS
VQREGGFLLFSQKKLASLKAQLPGGEIKNGRDPATLQLLKMWYELDEKKQRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFEKGVEGYINKWESENSRSYMHPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTP
MMSVPVLNTKKALKKVKQLKKLLTRVCLAEVLEKVDIEESLHVKHKLNKHRLYKIKFHFL
PHECYREEKCVKPRQILHFMETRFFKVLLEAIKRKTTKMASFNEVSARKTTRKDLDDDQD
KTVNSLEAVAEDEENIVDAEADEGDGDATETKRRKNQEEEVDYESEEENGEENVNENPED
EEAESEKEEGTPGAEEDQNRAEGEDSQHLSIVSQTKKGKDRLLQSAEVRVSAVVESHPSI
QDYTFDTENELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTSKEG
EKESVLQTEGINLAELFKYSDILDLNRLYCNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGIYKPLNRIGIQSNSSPLQQMTFETSYKFLKDATIMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLA
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcccaaagtggtgccgtggcggcggctggttggggtgtccttcgggatgtac
acggccgaggagatccggaagctgagcgtgaagcccatcacgaacccgcagtacctggac
aatgtgggcaatcctgctgtcaatgggctctacgacctggccttggggccccccgactcc
agggaagtgtgtgccacttgcatgcagaacttcagcaactgccccggacactttggccac
atagagctgcctctgcctgtgtacaaccccctgttcttcgataaattgtaccttctgatc
cgagggtcctgtttgaactgccacatgctgacctgccctcgagctgtggttcacctgctg
ctgagccagctgaaggtgctgcagaaagggctgctccacgccgtgcacgacctcgaaatc
gttctcaacaggtttgtagagcagtgtgcagatgcaacaggctcagaaattgaggaagag
ttgaatcgccacgtgcaggaaatgttacagagctctcaaataagggatcggtgctcaaat
gtcaaaaatgtgtgtgagtgtagaaataaactgatatcacagttctggaaagcacatatg
gcttcaaagaaatgcccaaactgcaaatccaggagatcactggtgcgaaaggagcacaac
agcaagctgacagtaacctatccttctacagtgtaccataagtcaggagaggaaggcatt
ctggatgaaacagcaggtattgatgaaagccagttagggaagagaggatacctgacacca
atgactgccaaggagtacatcctggctctgtggaagaatgaaggtttctttcttcgttat
ctcttccctgggatggatccccatgatagttcaggattcagtccagacatgtttttttta
gatctgcttgtggttccaccttcaaggtatcgtcctgtaaatcgccttggagatcgcctg
ttcacaaacgggcagactgtgaacttgcaggctgtgatgaaagatgcccaattgataagg
aagctcttggttttcatggccaaagaacagtgtcagccaataaaatttacagaagaaatt
caaacagagacaggagaggatagtgaacctctggaccgttctgtgcttaccacaattcca
ggacagagcattgcagataagctgtacaacgcctggatacgtctccagagccatgtcaac
attgtgtttgacagtgacatggacaagctgataacagaaaaataccctggtattcgtcag
ctgttggagaagaaggaagggctgttccgcaagcacatgatggggaagcgcgtggatttc
gctgctcgatccgtcatttgccccgacatgtacattgggaccaacgagattggcatcccc
atggtatttgccaccaaactgacttatcctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcatcaatggccccaaggtgcaccctggggcctccatggtcattaac
gaggacgggtctcgcacggtgctgagcgccaccagcctgacccagcgcgaggccatcgcc
aagcagctcctcaccccctcctcaggggcaccccagacaggcctgaagattgtgtgtcgg
cacatcaggaacggggacgtgctgctgctgaaccgccagcccacgctgcacagaccctcc
atccaagcgcaccgcgcccgcatcctgcccggggagaaggtgctgaggctgcactacgcc
aactgcaaggcttacaacgccgacttcgatggggatgaaatgaatgcccatttcccacag
agcgagctgggcagggcagaggcctacaccttagccatcactgataaacagtacctggtg
ccaaaggatgggaaaccactccctggcttgatccaggaccacatgatttctggagtcagc
atgacaatccggggctgctttttcaccagagagcagtacatggagcttgtgtaccgaggg
ctgacagacaaaaaaggaagaattaaaacctttcctccagccattatgaagccacagcga
ttatggacaggaaagcaggttgtttccacattgttaataaacatcattccagacaaccat
gctccactgaatttgactgggaaagcaaaaattggtggcagagcctgggtgaagggacct
gcaaaaggatgtctgaatcttgattcaatgtgtgaatctcaggttattatcaaagatggg
gaattactgtgtggagtgctggacaaagctcactttggcagctctgcctatgggctggtc
cactgctgctatgagatctatgggggtgaaaccagtgggaaggtgctgacgtgtctgggg
cgcctcttcactgcttacctgcagctgtacaggggcttcaccatggggattgaagatatt
ttggttaaacgtgaagcagaccacaaaagaaaaaaaatcattgaaaggtcaaggcagagt
ggtattgaagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggaggtc
caagggaagtggcaggatgctcatctctgcaaagaccagagggattttaacatggttgat
atgaaattcaaggaggaagtaaacaattacaacaatgaagtcaacaaggtttgcatgccc
cttggtctccacaggagctttccagagaacaatttgcagttgatggtgcagtcaggagcc
aaaggatccactgtaaacacaatgcagatttcttgtttgctgggccagattgagctggaa
ggccgaagacccccgctgatggcatctggcaaatcactgccatgtttccaaccttatgac
ttttcccctagctcaggaggatttgtgactggcagatttctcactggaatcagaccttct
gaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccgttctgggtacctgcaaaggtgtatcataaaacatttggaaggactggtagttcag
tatgacctgactgtacgagacagcgatggcagcgtggtgcagtttctgtatggagaagat
gggctggatatccctaaaactcagttcttgcaacctgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggagtct
caccaagctaaccagcagttcaaagccatcaagaagtggcgagccagacaccaaaactct
gtgcagagagaaggaggctttctgttgttttcccaaaagaaattggcaagtttgaaagca
cagcttccaggaggtgaaataaagaatggaagagatcctgctactttacagttgttgaag
atgtggtatgagcttgatgagaagaaacaaaggaagtatctgaagaagacaaataagtgt
cctgacccaagccttggggtttggcgtccagatacttattttgcatcagtttcagaaaca
tttgaaaagggagttgaaggctatatcaataaatgggaatctgagaacagccggagctac
atgcacccagcactttcttctgatagattaaaggatctattgtatttaaagtggcagcgt
tctctctgtgaccctggagaagctgtggggcttcttgctgctcagagcattggggaacct
tcaacacagatgactctaaacacctttcactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgagggaaatactgatggtggccagctcaaacattaaaacaccg
atgatgagtgttcctgtgctcaataccaagaaagctctcaaaaaggtgaaacagcttaag
aaactgctcacaagagtgtgcttggctgaggttttggagaaagtggacatcgaggaatcc
ctgcatgtgaagcacaagctgaacaagcatcgcctctacaaaatcaaattccatttcttg
ccccacgaatgttaccgagaggagaagtgtgtgaagcccaggcagatcttgcacttcatg
gaaacaaggttctttaaagttcttctggaagcaattaaaaggaagactacaaagatggca
tcttttaatgaagtcagcgctcggaagacaactcggaaggatttagatgatgaccaagac
aagacagtgaatagtttggaagctgtagcagaggatgaagagaacattgttgatgcagaa
gctgatgaaggggatggtgatgctacagaaacaaaacggaggaagaaccaggaagaagag
gttgattatgagagcgaagaagagaatggggaagaaaacgttaatgagaatccagaagac
gaagaggctgaatctgaaaaagaagaaggcactcctggtgctgaagaggatcagaacaga
gcagagggtgaagattctcagcatctttccattgtgtctcagactaaaaaagggaaagat
agattgcttcagtcagcagaggtgcgagtgagcgctgttgtggagagccacccatccata
caggattacacctttgacaccgagaatgagctttggtgtgaggtttccttggcactgcca
ctgaccaaggtgtactttgacctctcctccctgctggcatccctggcgcgcagcacggtg
atccacgaggtgaagggcatcacacgctgcctgctgaacgagagtaccagcaaggaggga
gagaaggaatctgttctccagacagaagggataaacctggcagagctcttcaaatactct
gatattttggacctgaacagactttattgcaatgatatccatgccatggctaagaattat
ggaattgaatcagccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcgacacctttcacttgtggcagattacatgtgttttgaagga
atttataaaccactgaatcgcattggaattcagtccaactcctcccctctgcaacagatg
acgtttgaaaccagctacaaattcttgaaggatgcaacaataatgggtgcccacgatgag
ctgcgatccccttcggcctgcctggtggttggaaaggttgtcaaaggaggaactggcttg
tttgacctcaagcagcccctggcatag
DBGET
integrated database retrieval system
