Onychostruthus taczanowskii (white-rumped snowfinch): 121343019
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Entry
121343019 CDS
T07590
Symbol
COL9A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04510
Focal adhesion
otc04512
ECM-receptor interaction
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121343019 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121343019 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121343019 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otc00535
]
121343019 (COL9A3)
Proteoglycans [BR:
otc00535
]
Extracellular matrix (ECM) proteoglycans
Others
121343019 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
121343019
NCBI-ProteinID:
XP_041273743
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MNESCSAAPPPSPTSSLQARPLSLAPAGATGLSGGEESLLCKLRAARRRRDLLDPGGERV
WLPGGKGERQSLGTMAGISALGLLSLCQLLASASAQSLPRIGPQGPPGPPGPPGPSGKDG
IDGEPGPPGLPGPPGPKGAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALG
PAGPPGPAGKGLPGPPGPPGPSGLPGGHGFRGPSGPFGLPGFPGPPGPPGPPGLPGALPD
GGGDLQCPALCPPGPPGPPGMPGFKGHTGHKGEPGEVGKQGEKGNPGPPGPPGIPGGVGL
QGPRGLRGLPGPMGPAGDRGDIGFRGPPGIPGPPGKAGDQGSKGPQGFRGPKGDTGKPGP
KGNPGARGLIGEPGMPGKDGRDGAPGLDGEKGDAAPTGAPGEKGPNGLPGLPGRAGIKGS
KGEPGSPGEMGEAGPSGEPGIPGDVGIPGERGLPGPRGATGPLGLQGPTGARGVRGFQGP
KGASGEPGLPGPTGIRGETGDRGPLGVPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGE
PGKRGELGPKGVQGPNGTAGAPGIPGHPGPMGHQGERGVPGITGKPGPPGKEASEQHIRE
LCGEMINEQIALLAANLRKPLAPGMTGRPGPAGPPGPPGSTGTVGHPGARGPPGYRGPTG
ELGDPGPRGDPGEKGDKGPVGQGIDGPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDP
GTPGTVGAQGTPGICDTSACMGAVAASTSKKS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagctgctctgctgctccccctccttctcccacctcctctctccaagctcgg
cccctctcccttgctccagctggagccacaggtttatctggaggcgaggagtctctgctc
tgtaagctgagagccgcgaggaggaggagggatctgctggaccctggaggagaaagggtt
tggctgcctggaggaaagggagagaggcagagcctgggcaccatggctggaatctctgct
cttgggctcctctccctgtgtcagctcttggcctcagcatcggctcagtcccttccaaga
attggaccacaaggccctcctggaccaccaggaccccctggaccatctggcaaggacggc
attgatggagagccaggccctcctggtttgccaggcccaccagggccaaaaggtgcacca
gggaagcctggagctgcaggtgaagctggattgcctggccttcctggagtggatggtttg
acaggaactgatggcccacctggcccaaatgggcctccaggagaccgtggtgcattggga
cctgctgggccacctggaccagctggcaaaggactaccaggacctccagggcctccagga
cccagtgggctccccgggggacatggatttcggggcccttctggaccttttggtctgcca
ggattcccagggcctcctggaccacctgggcctcctggtcttccaggggcccttcctgat
ggcggtggggaccttcagtgcccagctctgtgcccaccaggtcccccaggccccccagga
atgccaggattcaagggacacactggtcacaaaggagagcctggtgaagtaggaaaacaa
ggagaaaagggtaaccctggccctcccggccctccagggattcccggcggtgttggcctg
cagggcccaagaggactgagaggcctccctggtccaatgggtccagctggcgacagaggt
gacattggattcagaggcccacctgggatcccaggacctccaggcaaagctggagaccaa
gggagcaaaggacctcagggattccgggggcccaaaggtgacactggtaaacctggacca
aaaggaaacccaggggctcgtgggctcataggagaacctggaatgcctggcaaggatggg
cgggatggagcccctggactcgatggtgagaagggcgacgcagctcccacgggtgctcct
ggagagaaggggccaaatggacttcctggtctgcctggaagagcaggtattaaaggctca
aagggtgaaccaggcagccctggagagatgggagaggcaggtccctctggagagccaggc
atccctggcgatgttggcatccctggtgagagaggtctgccaggacccagaggagcaact
ggaccactcggcctccaaggccccacaggagcacgaggtgtccgaggtttccagggaccc
aaaggtgccagtggagagcctggccttcctggcccgactgggatccgtggagagacagga
gacaggggtcctctcggtgttcctggtcccaaggggaaccagggcattgctggagcagat
ggcctcccaggtgacaaaggagagctgggtccctttggacctcctggccaaaaaggagag
ccaggaaaaagaggagaacttggtccaaaaggtgtccaaggacctaacgggacagctgga
gcaccagggatcccaggacatccaggacccatgggtcaccagggggagaggggtgtccct
ggcatcacaggaaaacctggacctcctggcaaagaggccagtgaacaacatatcagagaa
ctctgtggggaaatgataaatgagcaaattgcactgctggctgctaacctgaggaagccc
ttggctcctggaatgacgggacggcccggcccagccgggcccccaggccctcctggaagc
acgggaactgttgggcatcctggtgctcgtgggccccctgggtacagagggccaacggga
gagctgggtgatcctggacccagaggtgaccctggtgaaaagggagacaaaggacctgtt
ggccaaggcatcgatgggcctgatggtgaccaaggactgcagggaccacctggtgtgcct
ggcattactaaaaacggccgtgatggtgctcagggtgaacccgggctgccaggggatcct
gggactcctgggactgttggggctcagggaactccaggaatatgtgacacgtcggcttgc
atgggagctgttgcagcatcaacttccaaaaaatcataa
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