Ornithodoros turicata (relapsing fever tick): 135367336
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Entry
135367336 CDS
T11155
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
oti Ornithodoros turicata (relapsing fever tick)
Pathway
oti03020
RNA polymerase
oti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135367336
09124 Replication and repair
03420 Nucleotide excision repair
135367336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oti03021
]
135367336
03400 DNA repair and recombination proteins [BR:
oti03400
]
135367336
Enzymes [BR:
oti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135367336
Transcription machinery [BR:
oti03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135367336
DNA repair and recombination proteins [BR:
oti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135367336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
135367336
NCBI-ProteinID:
XP_064456621
UniProt:
A0A2R5LEF0
LinkDB
All DBs
Position
8:complement(40159960..40174911)
Genome browser
AA seq
1941 aa
AA seq
DB search
MSQIVTTDSKAPLREAKKVQFGILSPDEIRRMSVTEGGIKYPEIYEGGRPKLGGLMDPRQ
GVIDRTARCQTCAGNMTECPGHFGHIDLAKPVFHCGFLTKSIKILRCVCFYCSKLLVSPN
NPKIKEIVTKSKGAPRKRLAHVYDLCKGKNICEGGDEIDAKVGESQVQEDTNKKVGHGGC
GRYQPSIRRSGLDLTAEWKHINEDSQEKKIQLSAERVWEILKHISEEECQILGMDPRYAK
PDWMIVTVLPVPPLAVRPAVVMFGSARNQDDLTHKLADIVKANNELIRNEQSGAAAHIIA
ENIKMLQFHVATLVDNEMPGLPRAMQKSGRPLKSIKQRLKSKEGRIRGNLMGKRVDFSAR
TVITPDPNLRINEVGVPRSIAQNLTFPEIVTPFNIDQMHDLVRRGNNQYPGAKYIIRDNG
ERIDLRFHPKASDLHLQCGYRVERHVRNGDIIVFNRQPTLHKMSMMGHKIRVLPWSTFRM
NLSVTTPYNADFDGDEMNLHVPQSLETRAEVEQLAMVPRQIITPQSNKPVMGIVQDTLTA
VRKMTKRDVFLEKDQMMTILMFLPIWDGKMPMPAILKPKPLWTGKQIFSLIIPGNVNLIR
THSTHPDEEDDGPYKWISPGDTKVLIEHGELISGIVCKKTVGASSGSLMHVVFAELGHEV
AGAFYGHIQTVVNAWLLLEGHTIGIGDTIADKQTFIDIKNAIEKAKRDVIDVIEKAHNDE
LEPSPGNTLRQTFENQVNRILNDARDKTGASAQKSLSEFNNFKAMVVSGAKGSKINISQV
IACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGR
EGLIDTAVKTAETGYIQRRLIKAMESVMIAYDGTVRNSNSQVIQLRYGEDGLDGSCVEFQ
SMPTMKPSNKAFEKKFRFDACNERYLRKLFTEDVVRELMGSATAVSELEKEWERLKKDRE
ILRSIFPTGDSKVVLPCNLQRMLWNAQKIFRVNLRSPTDLSPLRVIQGVEELVKKLVIVP
GEDHLSIQANENATFLFRSLLRATLCSKRVAEEFRLSTEAFEWLLGEIETRFHQSQGQPG
EMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFLM
GAAARDAEKAKDVLCRLEHTTLRKVTANTAIYYDPDPQNTVVAEDQEFVNVYYEMPDFDP
TRISPWLLRVELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNS
EDSKFQDEEEQVDKMEDDVFLRCIEANMLSDMTLQGIEAITKVYMHLPTTDNKKRILLTE
TGEYKAIAEWLLETDGTSLMRVLSERDVDPVRTYSNDICEIFAVLGIEAVRKAVEKEMNH
VISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAAS
HAEVDYLKGVSENIIMGQLARMGTGAFDLMLDAEKCKYGIEIPMNLPGMLGPLGGTGLFF
GSAATPIAGMSPQMTPWNQGATPAYGSVWSPGVGSGMTPGAAGFSPSAASDASGFSPAGC
SPSWSPQPGSPASSPASPYIPSPHSPNYSPSSPAYAPSSPSMTPASPSYSPTSPSYSPTS
PTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPKYSPTSPSYSPTSPSYSP
GSPQYTPTSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQ
YSPTSPQYSPSSPKYSPSSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGY
SPSSPTYSPTSPNMEEDSDND
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagatagtgacaacggactctaaggctcccttgcgggaagccaaaaaagttcag
tttgggatcttaagtcctgatgaaattcgtcgcatgtccgtaacggagggcggcatcaag
tatcccgagatctatgaagggggtcgcccaaagttgggtggtctcatggacccccgacag
ggagtcattgaccgaacagcccgttgccagacgtgcgcgggaaacatgacggaatgtccc
ggccattttggccacatcgatcttgccaagcccgtcttccattgtggcttcctcacaaag
agcatcaagatcctcagatgcgtttgcttctactgctccaagttgctagtcagtccgaac
aatcccaagatcaaggagattgtgacaaaatcgaagggggcgccacgcaagcgactggcg
cacgtctacgacctttgcaagggcaagaacatctgcgaggggggagacgagatcgacgca
aaggttggcgagagtcaggtgcaggaggacaccaacaagaaggtgggtcacggcgggtgc
ggacgttatcaaccgagcatccgtcggagcgggctggacctgacggctgaatggaagcac
atcaacgaggactcgcaagagaagaagatccaactctctgcggagagggtgtgggaaatc
ctgaagcacatctcggaggaagagtgccaaattctcggaatggacccccggtatgccaag
cccgattggatgattgtcacggtgctgccggtccctccgcttgccgtgcgtcctgcagtc
gtcatgtttggctcagccagaaaccaggatgacttgacccacaagttggcagacattgtc
aaggccaacaacgaattgatccgcaatgagcagagtggagctgccgcacacatcatcgcg
gagaatatcaagatgttgcagttccatgtagccacactcgtggacaatgagatgcccgga
ttgccaagggccatgcaaaagtccggacgtcccttaaagtccatcaagcagagacttaag
agtaaagaagggagaatcagaggaaaccttatgggtaaacgtgtagacttctcggcccga
actgtcatcactccggatcccaacctccgcatcaatgaggtgggagttccacgatccatc
gcgcagaacctcacctttcccgagatagtgacacctttcaatatcgaccaaatgcacgac
ctggttcgtcgaggcaacaaccagtacccgggagccaagtacatcatccgcgacaatggt
gaacgaatcgatctccgctttcacccgaaggcgagcgacttgcatctgcagtgtggttac
agggtggaacgtcacgtccgcaacggcgacatcatcgtgttcaaccggcagcccaccctc
cacaaaatgtccatgatgggtcacaagatccgggtacttccgtggtctaccttccggatg
aacctcagtgtgaccactccgtacaacgccgacttcgatggagatgagatgaacctccac
gtaccgcagtcactggagacgagagccgaagtggagcagttggccatggtgcccaggcag
attatcactccgcagtccaacaaacccgtcatgggcatcgtgcaggacacacttactgcc
gtccgcaaaatgaccaagcgggacgtctttctcgaaaaggatcaaatgatgaccatattg
atgttccttcccatctgggatggcaagatgcccatgccagccatcttgaagcccaaaccc
ctgtggacgggcaaacagattttctccctcatcattcccgggaacgtcaacctcatccga
acgcacagcactcacccagatgaagaagatgacggtccatacaagtggatctccccagga
gacacaaaggtgctcattgaacatggtgaactcatcagcggaattgtttgcaagaaaact
gtcggagcatcgtctggatctctgatgcacgtcgtgtttgccgaacttggccacgaggtg
gccggagccttctatgggcacatccagactgtggtgaacgcttggctactgctcgaggga
cacaccatcggtattggtgacaccatcgctgacaagcagaccttcatcgacatcaaaaac
gccattgagaaggccaaacgcgacgtgatagacgtcattgagaaggctcacaatgacgag
ctggagccttcgcccggtaacactttgcgacagacctttgagaaccaggtgaaccgtatt
ctgaacgacgcccgtgacaagacgggtgctagtgcgcagaagtcactttcagaattcaac
aacttcaaagctatggtggtctccggcgccaagggttccaagattaacatctctcaggtc
atcgcctgtgtggggcagcagaacgttgaaggcaagcgtattccatttggattccgcaaa
aggacgctgccccatttcataaaagacgactacggtcccgaaagtaggggtttcgtagag
aactcgtacctggctggtctcacgccttcagagtttttcttccacgctatgggaggcaga
gaaggtcttatcgatacagctgtaaagactgcagaaacaggttatatccagcgacgtctt
atcaaagctatggagagtgtcatgattgcttatgatggcacggtgcgaaacagcaacagt
caggtgatccagctgcgttacggagaagacggcctggatgggtcatgcgttgagttccag
agcatgcctacaatgaagccctccaacaaggcctttgagaagaaattccgtttcgatgcc
tgcaacgaaaggtatctgcgaaagctgttcacggaagatgtggttcgagaactgatggga
agtgccacagccgtgtccgagctggagaaggagtgggaacggttgaagaaggaccgagag
attctcaggtccattttccccacgggcgacagcaaggtcgtgctgccttgcaacctgcaa
agaatgctgtggaacgcacaaaaaatcttccgcgtcaaccttcggtcaccgactgacctc
agtccgctgagagtcattcaaggtgttgaagaactggtgaagaagctggtgatcgtgccc
ggtgaagatcacctcagtatccaggccaacgaaaacgccaccttcctcttccgatccctg
ctgcgagcaacactgtgctccaagcgtgtggctgaggagttccgcctctcaacggaggcc
ttcgaatggcttctcggagaaatcgagaccaggttccatcagtcgcaaggtcaacctgga
gaaatggtcggtgcattggctgcccagtccttgggcgagcccgccacccagatgacgctc
aacactttccactacgctggtgtgtcagccaaaaacgtgacgttgggtgtgccccgtctc
aaagagatcatcaacatctccaagaagcccaagactccttccttgacggtcttcctgatg
ggtgcggccgcccgtgatgccgagaaggccaaggatgtcctctgccggctggagcacacg
acgctccgcaaggtcacagccaacactgccatctactacgacccagacccgcagaacacg
gtcgtcgcggaggatcaggagtttgtcaacgtgtattacgaaatgcccgactttgaccca
acacgtatatcgccttggctgctccgcgtcgagctggaccgcaagcgtatgacggacaag
aagctcaccatggaacagatcgcggagaagataaatgccggtttcggtgatgacctgaac
tgcatctttaatgacgacaatgccgaaaagctggtgctacgtatccgtatcatgaacagt
gaagacagcaagttccaagatgaagaagaacaagtggacaaaatggaagacgatgtcttc
ctgcgttgcattgaagccaacatgctcagcgacatgacacttcaggggattgaagccatc
acaaaggtgtacatgcatctgccgacaaccgacaacaaaaaacgtatcttgctcactgag
acgggcgagtacaaggccattgcggagtggctgctcgagacggacggcaccagcctcatg
agagtcctgagcgagcgggacgtcgatcccgtccgcacctattccaacgacatttgcgag
atctttgcggtcctcggaatcgaggccgtccgtaaggctgttgagaaagaaatgaaccac
gtcatctcattcgacggctcttacgtcaattaccgtcacttggccctgctttgtgacgtc
atgactgccaagggtcacttaatggccatcacacgtcacggcatcaaccgtcaggacacc
ggtgcactcatgaggtgttccttcgaagagacggtggacgtgctgctagacgcggcatcg
cacgctgaagtcgattatctgaaaggcgtgtcggagaacatcatcatgggccaattggct
cgaatgggaactggcgcctttgatctcatgctggatgcagagaagtgcaagtacggcatt
gaaatacccatgaacttacctggaatgttgggtcctcttggaggaactggtttgttcttt
ggaagtgctgcgacacccatcgctggaatgtctccccaaatgacaccttggaaccagggt
gcaactccagcatacggaagtgtctggtccccaggggtaggaagtggcatgactcccgga
gcggcgggattctcgccgtcagcagccagcgatgcgagcggtttcagccccgcaggctgc
agtcccagctggtctccgcagcctggttcgccagcatcctcaccagcttctccttacatc
cccagcccccactctccaaactactccccttcctcccctgcatatgcaccatcttcccca
tcaatgactcctgcttctccctcctactcccccacatctccgtcatactccccgacttcc
ccaacttactctcccacctctccgaactactcccccacgagccccagctactccccgact
tcaccttcttactcccctacttcaccatcttattcccccacctctccttcttactccccg
acttctccatcctactctcccacatctccatcctattctcccacttctccgtcctactcg
ccaacgtctccgtcttactcccccacttcaccatcctactctccaacttccccttcctac
tctccgacctctccatcctattctcccacgtccccttcatattctcccagctctccaaac
tacacaccagcatctccttcctactcccccacatctccgtcttactcgccaacttctcct
tcttactcccctacttcgccttcttactccccaaccagtccgtcttactccccgagctcg
ccaaactattctccacagagccccagttactcccccagcagtccaagttactccccgagt
agcccaaagtactcgcccacttctccttcgtactcgccgacgagcccaagctattcaccg
ggctcaccgcagtacactccgacgtcaccaaagtattccccgacttcacctacctactct
ccgacttcgccgtcttactccccgtcgagtccaaaatattctcccacgagtccaaagtac
tcgccgacaagtccgacgtacacgccatcatctccgaagtacagcccaacttcgccacag
tacagccctacttccccccagtacagtccaagttcgccgaaatattcaccatcatctccg
aagtattcacctacgtcaccgacctattcacccacatctccgaagtactctccaacgtca
cctacttactccccgacaagtccaaagggatcgagttactctccgacaagtccgggctat
tctccttcttcgcccacgtacagtccgacgagtcctaatatggaggaagacagtgataac
gattga
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integrated database retrieval system
