Ottowia sp. oral taxon 894: ADJ79_09545
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Entry
ADJ79_09545 CDS
T04031
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
oto
Ottowia sp. oral taxon 894
Pathway
oto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADJ79_09545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oto03019
]
ADJ79_09545
03016 Transfer RNA biogenesis [BR:
oto03016
]
ADJ79_09545
Enzymes [BR:
oto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ADJ79_09545
Messenger RNA biogenesis [BR:
oto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ADJ79_09545
Transfer RNA biogenesis [BR:
oto03016
]
Prokaryotic type
tRNA degradation factors
ADJ79_09545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
DNA_pol3_a_NI
S1_2
Phage_tube
DUF5813
ORF_2_N
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AKU67396
UniProt:
A0A0K1NFB8
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All DBs
Position
2175898..2178036
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AA seq
712 aa
AA seq
DB search
MSLFNKVTKTFQWGDKTVVMETGEIARQATGAVLVNIDDTVVLATVAASKQAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFFNEVHVVVHTL
SLNPEVDADIAAMIAVSAALSVSGIPFNGPIGAARVGYVNGEYVLNPGPTARKNSQLDLV
VAGTESAVLMVESEADQLSEDVMLGAVVFGHEQGKIAIEAIHDLVREAGKPLWAEDGTWA
PEARDEAFMAKVKALAEEKLRAAYQIRSKQARTQALREAYAAVKAALAEEGAEFDEVKVD
NQLFELEAAIVRGQILAGEPRIDGRDTRTVRPIEIRSSVLPRTHGSALFTRGETQALVVT
TLGTERDAQRIDALAGEFEDRFIFHYNMPPFATGEAGRMGSTKRREIGHGRLAKRALVPL
LPGKDEFPYTIRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKEGNR
FAVLTDILGDEDHLGDMDFKVAGTTGGITALQMDIKIQGITKEIMQVALAQAKEARMHIL
GKMQEALGEAKAEISSYAPKLYTMKINPEKIRDVIGKGGATIRQLTEETGTTIDIAEDGV
ITIASNDAAKAEEARRRIEEITAEAEVGQVYEGPVTKILDFGALVNILPGKDGLLHISQI
AHERVEKVSDYLQEGQVVRVKVLETDDKGRIKLSMKALLERPAREERQPAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagccttttcaacaaagtcaccaagaccttccagtggggcgacaaaaccgtggtaatg
gaaacgggcgaaatcgcccgccaggccacgggcgcggtgctggtgaacatagacgacacc
gtggtgctggccacggtggccgccagcaagcaggccaagccgggacaggactttttcccg
ctgacggtggactacatcgagaaaacctacgcggcgggcaagattcccggcagctttttc
aagcgtgaagccaagcccagcgagctggaaacgctgaccagccgcctgattgaccggccc
atccgcccgctgtttccggaaggctttttcaatgaagtgcacgtggtggtgcacacgctg
tcgctgaacccggaggtggatgcggatattgccgccatgatcgccgtgagcgcggcgctg
tcggtgagcggcattcccttcaacggccccattggcgcggcgcgcgtgggctacgtcaat
ggcgaatacgtgctcaaccccggccccacggcgcgcaagaacagccagctggacctggtg
gtggcgggcacggaatcggctgtgctgatggtggagtcggaagccgatcagctttctgaa
gatgtgatgctgggcgcggtggtgttcggccacgagcagggcaagattgccattgaggcc
attcacgatttggtgcgcgaagcgggcaagcccctgtgggccgaagacggcacctgggcg
ccggaagcccgggacgaagccttcatggccaaagttaaagcgctggccgaagaaaaactg
cgcgcggcctaccagattcgcagcaagcaggcccgcacgcaggccctgcgcgaggcgtat
gccgccgtcaaggccgctttggccgaagagggcgcggagtttgacgaagtgaaggtggac
aaccagctgttcgagctggaggcggccattgttcgcgggcagattctggcgggcgagccg
cgcattgacgggcgcgacacgcgcaccgtgcgccccatcgaaatccgcagcagcgtgctg
ccgcgcacgcatggctcggccctgttcacgcgcggcgaaacgcaggcgctggtggtgacc
acgctgggcaccgagcgcgacgcgcagcgcattgacgcgctggcgggcgagtttgaagac
cgcttcatcttccactacaacatgccgccctttgccacgggcgaggcgggccgcatgggc
agcaccaagcggcgcgaaatcggccacggccgcctggccaagcgcgccctggtgccgctg
ctgcccggcaaggatgagtttccctacaccatccgcgtggtgagcgagatcaccgaatcc
aatggttcttcatccatggcttccgtgtgcggcggctgtctgagcctgatggatgcgggc
gtgcccatgaaggcgcatgtggccggcattgcgatgggcctgatcaaggaaggcaaccgc
tttgccgtgctgaccgacattctgggcgacgaagatcacctgggcgacatggacttcaag
gtggcgggcacgacaggcggcatcacggccttgcagatggacatcaagattcagggcatc
accaaggaaatcatgcaagtggcgctggcgcaggccaaggaagcgcgcatgcacattctg
ggcaagatgcaggaagcgttgggcgaggccaaggccgagatcagcagctacgcgcccaag
ctctacaccatgaagatcaacccggaaaaaatccgcgacgtgatcggcaagggcggcgcg
accatccgccagctcacggaagaaacgggcaccaccatagacattgccgaagacggcgtg
atcaccattgccagcaatgacgccgccaaggctgaagaggcgcgccgccgcattgaggaa
atcactgccgaggcggaagtggggcaggtttatgaaggccccgtgaccaagattctggac
tttggcgcgctggtgaacatcctgcccggcaaggacggcctgctgcacatcagccagatt
gcccatgagcgcgtggaaaaggtgagcgactacctgcaagaaggccaggtggtgcgcgtg
aaggtgctggaaaccgacgacaagggccgcatcaagctgtcgatgaaagccctgctggaa
cgcccggcgcgcgaagaacgccagccagcggctgaatga
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