Onthophagus taurus (bull-headed dung beetle): 111428668
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Entry
111428668 CDS
T07420
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111428668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otu03019
]
111428668
Messenger RNA biogenesis [BR:
otu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111428668
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111428668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
DUF7222
Motif
Other DBs
NCBI-GeneID:
111428668
NCBI-ProteinID:
XP_022920079
LinkDB
All DBs
Position
1:33028352..33049321
Genome browser
AA seq
2377 aa
AA seq
DB search
MNLDSLSFTLSQISYLVGSLTKKNSKQVVEELTKLVTLHGLEADRHLLQCLFSSVDFTET
SSGKIVAPPTTPHSQLLLEQCSQLLNKPSLLSSICYITDKPINSQKTLKVGSQFFQQLCK
CLRLTPVQEAIFALAFCHSSNSELVSYAQNRLRECIPDLVKSYVDTEGSSSQHAGGLHET
TPEVLHLILSVVLKSPKDVGLSNDLHTTFLATLKKDFPKDIVPVVLAPLVYPEECEIGPE
MSSEGPGLSGGMLDTSLSDIIREVGFGFTASVEECRNTFLKLGVRDITSAHVARILTVMC
QQTSTIEDSINLQQPGSFNKSLEGRTWNIEVFIQTIKEVNPNFAWSSVISDLDHNGFMLK
DRQGLITLFKALRLGLQNSGFHPDTFPVDKFYRVWVNYEGQFSLIQLILKNPDVFCFADY
PSSSVAIDMLKTPPEQDSKELANWRSLNLIELLLHLSECNNLYHPVYELYKVPLTTIPDV
LVLALIQVHGSVTMLRQELLTNLIPIFLGNHPNSAVILHHAWHTQTLNFKNIIMHSMAEW
YTRGECDQTRLSRILDVAQDLKALSMLLNAQSTQSYPFIIDLACLASRREYLKLEKWIAD
KIREHGENFVFACIKFLHRRCPQLLTGKNDEPSLAKIPPLPTETLTTILMCLQSCAGSVS
AECQEAIIQLATTCNMYLKARQQPTTLIRANRMDGPFNPTAMGPLYNPPTVDQLSGLGNT
LANISLGGPANSTFNLQGGLGQLVPSPGSPSRILGAGPGPSNSPFPMLPLQHQGPVGTGA
SLVPNVTNLSSLNRLAPNPALDKPPRIPDQNVFPDMANVAKDIEDEANSYFQRIYNHPPH
PTLSIDEVLEMLKRFQDSPIKRERDVFNCMLRNLFEEYRFFPQYPDKELYITAQLFGGII
ERGLVTSYMALGLALRFVLDALRKTEGSKMYYFGIVALDRFKSRLKDYHKYCEHVRAIPH
FNEFPPHLVEYVEFGLQSLEPPTKPTGSVLPASLATMLAPVSSNSSTQVYKSSSSSVITS
KTSTTTTPLGTRPSIANATNIDTLLVATEKEEKITSPPESLQDKTAFIFNNLSQLNLQTK
CDEVRDIVTEEYWPWISQYLVMKRASIELNFHGLYSNFLDCLKMPEVNRMVTKETYRNIK
VLLRADKVIANFSDRSLLKNLGHWLGMLTLARNKPILQNDLDLKSLLVEAYHKGQQELLY
VVPFVAKILESCAKSKVFKPPNPWTMAIMNVLAELHQEPELKLNLKFEIEVLCKNLDIEV
SQLKPSDYLKDAERLRKIEYQLSQPLKKDSSQVAVSQLNIATTSLNEPELAPVPGQTASS
PPAMQNNSTTPTSSVAAPEPRFSYMDIQLAGSTALQNHLTINPTILLFQSQPQLKQLVRP
AVERAVNEWVLPVAERAIKIALQTCEHIIRKDFALDFEENRMRVAAHYMVRNLTAGMAMI
TCRDQLLASINAQMKGSLQSAMVGATTQQKEMIDQAATMIAQDNMELGCAVIQKTAIEKA
IPEIDKRLMSEFELRKIARQEGRRYCDAIALTYQAERMPEQIRLKVGGVTPQQMAVYEEF
ARNIPGFLPMSERETALFMAKPIVAMEPQGHPATPFQVAQSGAIASDDLTALFEKHAMDV
EQFIHAISGATSLQAMATNLHLLRDFLVNAMRNREVNCAAAIVQKCVEALQENLVPTEAE
PVMIRLKEIIIRILKSLQDPRAFGQQWTNKQVTKCLSEFRDEMRFNELAAEALIRSGLVN
IAAFDGALAQLLDTNGSYRALNMAILLLQNLFMDDRPTPLVSENDFYHTIEILMKINNHA
RQPSESLANIIDMLRHNQDQIFMSERSPGGPTSHIHNGILQVRATHFEDPPGFVERIDYL
IREWINVYNSQPTSRDSTKPFSMFVHQMNIHGMLKTDDLITRFFRLSTQLCVDLVYRYMT
DQTTTGNHLRVKCYNTLDAYIRLVALLVKHSGDSSNTTPKIHLLNKVLGIVAGCLLQDHE
QRGVEFQQLPYHRMFIMLFLELNNPEPVLETINYHVLTAFCHTLHILRPSKAAGFCYAWL
ELVSHRIFMGRMLAATPQQKGWAMYAQLLVDLFKYLAPFLRNAELAKPVTMLYKGTLRVL
LVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDILQEIT
YGPRVLGNFSSTITPPSFKKDLDNYLKSRAPVTFLSELRSNLQVSQEPGMRYNIPLMNAL
VLYVGTQAIAHIRGKNLTPNMSTIAHSAHMDIFQNLAVDLDTEGRYLFLNSIANQLRYPN
SHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFW
SHEFVHCASEIEKLFESVARSCFVQKTPVQAEGDLQE
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcgcaaataagttatttagttggctcatta
actaaaaagaactcgaagcaagttgtagaggagttaacaaagttagtgactctgcacggg
ttagaggctgaccgacacttgctgcaatgcctgttctcttcggtggattttactgaaaca
tcttctggtaaaatagttgcgccaccaacaacaccacatagtcaacttctattggaacag
tgttctcagctactcaacaaaccatccctgttgtcatctatctgttacatcacagataaa
cctatcaatagtcaaaagacattgaaggttgggtctcaattctttcaacaattgtgcaag
tgcctacgcctgacgccggtgcaagaagcaatcttcgcactcgccttttgccactcatcg
aattccgaattagtgagttatgctcagaacagattacgcgagtgcatccccgatttggtg
aaatcgtacgtggacaccgagggtagtagcagtcaacacgcgggcggccttcacgagaca
acacctgaggtcctacacttaatcctctcagtggtgcttaaatctccaaaagacgttggt
cttagcaacgatcttcatactaccttcttagcgacattgaaaaaagactttccgaaagat
atagttccggtcgttttagcgccgctcgtgtatccggaggagtgcgaaatcggccccgag
atgagctcggagggccccggtttatccgggggtatgttggacacgtccctatcggacatt
atacgggaggtcgggttcggatttacggccagcgtcgaggagtgtcgcaatacgttcttg
aaattgggtgtgcgcgatatcacgtctgctcacgtggctcgaattctgacggtaatgtgc
caacaaaccagcaccatagaggattctattaatttacagcaaccgggttcgtttaataaa
tctttggaaggacgaacatggaacattgaggtgtttatacagacaattaaagaggtgaat
ccgaattttgcctggagtagcgtgattagtgatttagaccataacggttttatgctaaaa
gaccggcaaggattaattacattgttcaaggctctgcgattaggacttcaaaatagtggg
tttcatccagacacgttccctgttgataaattttaccgtgtatgggttaattacgaagga
caattcagtttgattcaattgatattgaaaaatcccgatgtgttctgcttcgctgattat
ccaagttcatcagttgctattgatatgctaaaaacaccacctgaacaagacagcaaagaa
ttagcaaattggagatcgttaaatttgattgagttactgttacatttatcagaatgcaac
aatctttatcatcccgtttacgagttgtataaagtgccattaacaactattcccgacgtg
ttggttcttgcacttatacaagtccacggttctgtaacgatgctccgacaggaactttta
acgaatttaataccgatttttcttggtaatcatccaaactcggccgtcattttacatcat
gcctggcacacgcaaacgttgaacttcaaaaacatcatcatgcattcgatggctgaatgg
tatacaaggggtgaatgtgatcaaactcgattatccagaattctagatgtagcccaagat
ttaaaagcgctttccatgctgttaaatgctcaatcaacacaatcttatccttttattatc
gacttggcctgtttggcttcgagaagagaatatcttaaattagaaaaatggattgctgat
aagatccgagaacatggtgaaaactttgtttttgcttgtataaaatttttacataggagg
tgtcctcaattattaactggtaaaaatgacgaaccttctttagcaaagatacctccactt
ccaacagaaaccctgaccacgattctgatgtgcctgcaatcttgcgccggaagtgttagc
gccgaatgtcaagaagcaatcatccaactagcaacaacttgcaacatgtacttaaaagcg
cgtcaacaaccaacgactttaattcgagcgaatcgtatggacggaccattcaatccaaca
gcaatgggacctctttataatcctccaacagtcgatcaactttccggtctcggaaacaca
ctcgccaacatcagcttaggcggtccagcgaactcaacgttcaacttacaaggcggattg
gggcagctcgttccgtcgccgggatctccttcgcgtattttaggtgctggaccgggacct
tcaaacagtccgtttccaatgttacccttacaacatcaaggaccggtcggaacgggggct
tccctcgttccgaacgttacaaatttaagtagtctgaatagattggcgccgaatccagct
ttggataaaccgccgaggattcccgaccagaacgtcttccccgatatggccaacgttgcg
aaggacatagaggacgaagcaaacagttactttcagaggatatacaatcatccgccgcat
ccaactttatcgattgatgaagttttggaaatgcttaagagatttcaagattcaccaatt
aaacgggaaagagacgtatttaattgtatgttgagaaatttgtttgaagaatacagattt
tttccacaatacccagacaaggaactatatatcacagcacaacttttcggtgggataatt
gaaagaggtttggtaacatcttatatggctttaggcttagctctcagattcgttcttgat
gctcttcggaagactgagggatctaaaatgtattatttcgggatagtcgctttagatcgc
tttaagtcaagactgaaggattatcataaatattgcgaacacgttcgagcgataccgcac
tttaatgaatttccaccacatttggtcgagtacgttgaatttggattgcaaagtctggaa
cccccaacaaaacctaccggttcggttcttcctgcgagtttagctacaatgctggctccg
gttagtagtaattcgagtactcaagtgtacaaaagtagttcatcttcggtaataacctca
aaaacgagtacgaccacgactccgttgggtacaagaccttcgattgcaaatgcgacgaac
attgatactttattggttgcgactgagaaagaggaaaagatcacgtcgccaccggaaagt
ttacaagataaaacagcgtttatttttaataacttgagtcagttgaatttgcaaacgaag
tgtgatgaagtaagggatattgtaacggaagagtattggccatggatttctcagtatttg
gttatgaagagggcatccattgaactcaattttcatgggttatattctaactttttggat
tgcttgaagatgcctgaagtgaatagaatggttactaaagaaacttaccgtaacatcaag
gttttattgagggcagataaggttattgcaaatttttcggatcgatcattattgaaaaat
ttgggacactggttaggcatgttaaccttagcaagaaataagccaattcttcaaaacgat
cttgatttaaaatcgttattagttgaagcttatcacaaaggtcaacaagagcttctttat
gtggttcccttcgtggcgaaaatcctagaatcgtgtgcgaaaagtaaagtgtttaaacca
ccaaatccatggaccatggctataatgaatgtattggcagaattgcatcaagagccggag
ttaaagttaaacctgaagtttgaaatagaggtactatgcaaaaacttggatattgaagtg
tctcaattaaaaccttcagattatcttaaagacgccgaacggttgcgaaagattgaatat
caactttcgcaaccgcttaagaaagacagttcgcaagtagcggtttctcaattgaatatt
gccacgactagtttgaatgaaccagaattagctccggttcctggtcaaacagctagttca
ccacctgcaatgcagaataacagtacaactcccacttcttccgttgccgctccagaacca
cgtttcagttacatggacatccaattagctggaagcacagcgctacaaaaccatcttacg
ataaatccaacaattcttttattccaaagtcaaccacaattaaagcaattggttcgacca
gcggtagaaagagccgtaaatgaatgggtacttcctgtagctgaaagagcaattaagatt
gctttacaaacgtgcgagcatattattagaaaagatttcgccttggattttgaagaaaat
cgaatgcgagtggcggctcattatatggtacgaaatttaacagctggaatggctatgatt
acatgccgagatcaacttttagcgtcgataaatgctcaaatgaaaggaagtttacaaagt
gcaatggttggagctacaactcaacaaaaagagatgattgatcaagccgcaacgatgatc
gcccaagataatatggaactcggatgcgctgttattcaaaaaactgcaatagaaaaagca
attcctgaaattgataaaaggttaatgagcgaatttgaattgagaaaaattgctcgacaa
gaaggacgaagatactgtgatgcaatcgctttaacttatcaagctgaaagaatgcccgaa
caaatccgattgaaagtcggtggtgttaccccgcaacaaatggctgtttatgaagaattc
gcgaggaatattcctggtttcttaccaatgtctgaacgagaaactgcactgtttatggca
aaacccatcgttgccatggaaccacaaggtcatcctgctaccccatttcaagtagcacaa
tctggagcgatcgcctcggatgatttaacagcactttttgaaaaacacgcaatggatgtt
gaacaatttattcacgctattagtggggctacatcgcttcaagctatggctacaaatttg
catttattaagggattttttggtcaatgctatgcgtaatagagaggttaattgtgcagca
gccattgtacaaaagtgtgtagaagctctacaagaaaaccttgtaccaacagaagcagaa
cctgttatgattcgcttaaaagagattataattcgaatattaaaatctcttcaagatcct
cgagcgtttggacaacaatggaccaacaaacaagtgacaaagtgcctcagcgaatttcga
gacgaaatgcgttttaacgaactcgcagccgaagcgttaataagaagcggtttggttaat
atcgcggctttcgacggagctttggctcaacttttggatacaaacggaagttatagagca
cttaatatggcaatacttttattacaaaatttatttatggacgatagaccgacgccattg
gtttctgaaaacgatttctatcatacgattgagattttaatgaaaattaacaaccacgct
agacaaccatcagaaagtttagcgaatattatcgatatgcttcggcataatcaagatcaa
atatttatgagtgagaggtctcctggtggacctacttctcacattcataatggaatttta
caagttagggcaacgcattttgaggatccacctggatttgtagaaagaattgattattta
attcgagaatggataaatgtttataattctcaaccgacaagtagagattcaacgaaacct
ttcagtatgtttgttcatcaaatgaatatccacggaatgttaaaaaccgatgatttaata
actagattctttagactatcaacacaattatgtgttgatttagtctatagatatatgaca
gatcaaaccactacaggaaaccaccttcgtgttaaatgttacaatacattggacgcatac
attagactagttgcgttgttggtgaaacactccggggattcgagtaatactactccaaag
attcatctgttgaataaagtattgggaattgtggcgggatgtttgttgcaagatcacgaa
cagcgaggggtcgaatttcaacagttgccttaccatagaatgtttataatgctattcttg
gaattaaataatccagaaccggtgttagaaacaattaactatcatgtattgacggctttt
tgtcatactttgcatattttgagaccatcaaaagcagccggtttctgttatgcttggctt
gaattggtatcgcaccgcatttttatgggaagaatgttagcagctacaccacaacaaaaa
ggctgggcgatgtacgctcaattattggtggatttgtttaaatatttagcaccgtttttg
aggaacgcagaattagccaagccagtaacgatgctttataaaggaacattaagggttttg
ttggtgttgttacacgattttcccgaatttttatgcgattatcattacggattttgcgat
gtgataccgccaaattgtatacaaatgaggaacttaattttatcagccttcccgagaaat
atgcgtttaccagatccctttacgccaaatcttaaagtggacattcttcaagaaataact
tacggaccaagggtacttggaaatttttcttcaactattaccccaccatctttcaagaaa
gatctcgataattacctcaaatcccgtgctcctgtaacatttttatctgagctacgaagt
aatttacaagtatcacaagaaccaggaatgcgctataatattccattgatgaatgctctg
gtgttgtatgtcggtactcaagctatagctcacatacgtggaaagaatttaacaccgaac
atgtcgacgattgcgcatagtgcacacatggatattttccaaaatttggctgttgatttg
gatactgaaggtcgatatctcttccttaattcaatcgccaatcaattacgttacccaaac
agccatacacattatttctcttgtacattattgtatttatttgcggaggcgaacaccgaa
gctattcaagaacaaataacgagggttttattagaacgactcattgttaatcgaccacat
ccatggggattacttattacgtttattgagttaattaaaaatccaacttataaattttgg
tcgcatgaattcgttcattgtgcttcagaaattgaaaaattatttgaatctgttgctcgt
tcatgtttcgtccaaaaaactccagtacaagcggaaggtgatctacaagagtga
DBGET
integrated database retrieval system
