Oncorhynchus tshawytscha (Chinook salmon): 112216725
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Entry
112216725 CDS
T05605
Name
(RefSeq) septin-5-like isoform X1
KO
K16943
septin 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112216725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216725
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112216725
04812 Cytoskeleton proteins [BR:
otw04812
]
112216725
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
112216725
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Sperm associated proteins
112216725
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
112216725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
GTP_EFTU
Ras
RsgA_GTPase
Roc
nSTAND1
VapE-like_dom
AIG1
AAA_24
AAA_16
ABC_tran
FtsK_SpoIIIE
AAA_22
AAA_29
AAA_7
NACHT
Motif
Other DBs
NCBI-GeneID:
112216725
NCBI-ProteinID:
XP_024232518
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All DBs
Position
LG17:complement(4057596..4092236)
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AA seq
414 aa
AA seq
DB search
MILNMCVCVSLSTATIPALPSDGEFSSLAKDELGNLNLESFIREFPQNRYNCSSHQGTGL
ISGNFCYSSPLPEHHYLATPTSWTSDRPPRPKSPWGCLDPYTSEDQDREYVGFATLPNQV
HRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYKDRKVLNAEERLAQTVGITKNTVC
IEEKGVKLKLNIVDTQGYGDTINNTDSYKCVSDYIDHQFEQYRRDEIGLNRKNIQDNRVH
CCLYFISPFGHGLRPLDVECMRALQDKVNIIPVVAKSDGLTYDEVKKKKSRILSEIDKYR
LKIYQFPDCDSDEDEEFRRQDMELKRSVPFAVIGSNMVVDVNGRRIRARLYPWGVVEVEN
PYHSDFVHLRNMLVRTHMQDLKDMTHDTHYESYRAQWLCKSQRTDVDYDFCHTI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgaatatgtgtgtgtgtgtgtctctctccactgccaccatacctgcactgcct
tcagatggagagttctccagcctggctaaagatgaattggggaacttaaatctggagagt
ttcatcagggagtttccccagaacagatacaactgttcctctcaccagggcacaggattg
atctcaggaaacttctgttactcctctcctctcccggaacaccactacctggccacaccc
accagctggacctctgaccgccccccacgacccaagagcccctggggctgcctagacccc
tacacctctgaggaccaggacagggagtatgtaggctttgctactctgcccaaccaggta
cacaggaagtcagtaaagaagggatttgagttcactctgatggtggtaggagagtctggt
ctgggtaaatctacactagtcaacagtctgttccttacagacctctacaaggacaggaag
gtgctgaatgcagaggagaggctggctcagactgtgggcatcactaagaacacagtgtgc
atcgaggagaagggagtgaagctcaaactcaacatagtggacacacaaggttatggagat
accatcaataatacagacagctataagtgtgtttcagactacattgaccatcagtttgag
cagtaccgcagggatgaaattggcctgaacagaaagaacatccaggataacagagtccac
tgctgcctctacttcatctctcccttcggacatggtctgcggccattggatgtagagtgt
atgagggctctgcaggacaaggtcaacatcatccctgttgtggccaaatctgatggtctc
acttatgatgaggttaagaagaagaagagcaggatcctaagtgagatagataagtacagg
ttaaagatctaccagttcccagactgtgactctgatgaggacgaggagttcaggaggcag
gacatggagctcaagaggagtgttccgtttgcagtgatcggcagtaacatggtggtggat
gttaatggtcggcggatccgcgcccgtctctacccctggggagtggtggaagtggagaac
ccatatcacagtgactttgtccacctgaggaacatgttggtgaggactcatatgcaggac
ctgaaggacatgacccatgacacacactacgagagttacagagcacagtggctgtgcaag
agccaacgcactgatgtggattatgacttctgccacacaatctaa
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